Experiment set18S313 for Agrobacterium fabrum C58

Compare to:

LB_Sorghum F72 F505

200 most important genes:

  gene name fitness t score description  
Atu0031 -4.1 -1.7 PTS system, IIA component compare
Atu0050 -2.7 -2.6 two component response regulator compare
Atu8095 -2.6 -8.1 hypothetical protein compare
Atu1030 -2.6 -2.9 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu1874 -2.5 -2.9 RecA protein compare
Atu4317 -2.5 -3.3 TetR family transcriptional regulator compare
Atu2073 -2.3 -4.4 membrane protein compare
Atu2684 -2.3 -3.4 hypothetical protein compare
Atu0030 -2.3 -2.6 phosphocarrier protein HPr compare
Atu0692 -2.3 -11.0 glutathione-regulated potassium-efflux system protein compare
Atu0769 -2.2 -1.5 protoheme IX farnesyltransferase compare
Atu0999 -2.2 -1.5 magnesium transport protein compare
Atu0912 -2.2 -2.0 Na+/H+ antiporter compare
Atu1739 -2.2 -3.5 permease compare
Atu0784 -2.1 -3.8 hypothetical protein compare
Atu0141 -2.1 -1.4 cytochrome O ubiquinol oxidase subunit I compare
Atu0486 -2.1 -5.0 dihydroorotate dehydrogenase compare
Atu0051 -2.1 -2.9 two component sensor kinase compare
Atu0189 -2.1 -1.4 ABC transporter, membrane spanning protein (peptide) compare
Atu1810 -2.0 -1.1 hypothetical protein compare
Atu0399 -2.0 -5.3 dihydroorotase compare
Atu1359 -1.6 -1.7 dnaK deletion suppressor protein compare
Atu3009 -1.5 -1.6 exopolysaccharide production protein compare
Atu0298 -1.5 -5.5 orotidine 5 compare
Atu1513 -1.4 -4.1 ABC excinuclease subunit A compare
Atu2125 -1.4 -1.5 ABC transporter, nucleotide binding/ATPase protein compare
Atu1327 -1.4 -2.3 NADH-ubiquinone oxidoreductase compare
Atu1028 -1.4 -2.4 hypothetical protein compare
Atu6098 -1.4 -1.4 transcriptional regulator, HTH family compare
Atu2832 -1.4 -3.6 tRNA modification GTPase compare
Atu3727 -1.3 -4.3 hypothetical protein compare
Atu1803 -1.3 -4.5 cold shock protein compare
Atu8191 -1.3 -1.5 hypothetical protein compare
Atu2439 -1.3 -0.7 hypothetical protein compare
Atu1354 -1.3 -1.4 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase compare
Atu0251 -1.2 -9.4 hypothetical protein compare
Atu0070 -1.2 -7.4 ribonucleoside-diphosphate reductase 2 alpha chain compare
Atu0978 -1.2 -4.0 two component response regulator compare
Atu0533 -1.2 -2.4 putative inhibitor of septum formation compare
Atu1308 -1.2 -5.4 aspartate carbamoyl transferase catalytic subunit compare
Atu0071 -1.2 -7.2 ribonucleoside-diphosphate reductase 2 beta chain compare
Atu0368 -1.1 -4.5 tRNA pseudouridine synthase I compare
Atu1446 -1.1 -2.3 two component response regulator compare
Atu0400 -1.1 -3.4 orotate phosphoribosyltransferase compare
Atu0269 -1.1 -3.6 exodeoxyribonuclease VII large subunit compare
Atu3517 -1.1 -3.0 acetyltransferase compare
Atu0602 -1.1 -6.6 glutamine synthetase compare
Atu1103 -1.0 -2.7 rRNA-adenine N6,N6-dimethyltransferase compare
Atu6189 -1.0 -1.8 protein secretion chaperone compare
Atu0601 -1.0 -5.8 oxidoreductase compare
Atu4205 -1.0 -5.3 TetR family transcriptional regulator compare
Atu0923 -1.0 -3.1 hypothetical protein compare
Atu2057 -1.0 -1.4 DNA helicase II compare
Atu0876 -1.0 -1.3 superoxide dismutase compare
Atu3299 -1.0 -2.8 hypothetical protein compare
Atu0188 -1.0 -0.6 ABC transporter, membrane spanning protein (peptide) compare
Atu1468 -1.0 -5.0 hypothetical protein compare
Atu2616 -1.0 -1.8 hypothetical protein compare
Atu0036 -1.0 -1.9 hypothetical protein compare
Atu0190 -1.0 -0.9 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu4711 -1.0 -4.1 two component sensor kinase compare
Atu3006 -0.9 -3.3 hypothetical protein compare
Atu0101 -0.9 -3.4 cytochrome c compare
Atu0045 -0.9 -6.3 heat shock chaperone compare
Atu3663 -0.9 -1.3 hypothetical protein compare
Atu1774 -0.9 -1.4 ABC transporter, substrate binding protein (peptide) compare
Atu3469 -0.9 -1.9 phosphoglyceromutase compare
Atu0971 -0.9 -1.0 two component sensor kinase compare
Atu3739 -0.9 -2.2 phosphoglycerate kinase compare
Atu8138 -0.9 -1.0 hypothetical protein compare
Atu0925 -0.9 -3.0 hypothetical protein compare
Atu2555 -0.9 -4.0 L-lysine 2,3-aminomutase compare
Atu2692 -0.9 -2.6 intracellular septation protein compare
Atu0142 -0.9 -1.7 cytochrome o ubiquinol oxidase subunit II compare
Atu3608 -0.8 -3.2 hypothetical protein compare
Atu1182 -0.8 -1.7 hypothetical protein compare
Atu0044 -0.8 -4.2 heat shock protein hslV compare
Atu2077 -0.8 -2.0 DNA polymerase III, epsilon subunit compare
Atu1307 -0.8 -2.8 dihydroorotase compare
Atu3698 -0.8 -2.0 thioredoxin compare
Atu4407 -0.8 -3.1 periplasmic nitrate reductase, NapD protein compare
Atu2824 -0.8 -2.0 hypothetical protein compare
Atu0977 -0.8 -2.3 serine protease DO-like protease compare
Atu2052 -0.8 -2.2 hypothetical protein compare
Atu3598 -0.8 -0.9 thiol:disulfide interchange protein compare
Atu0388 -0.8 -4.3 two component sensor kinase compare
Atu2193 -0.8 -0.8 hypothetical protein compare
Atu1099 -0.8 -3.1 hypothetical protein compare
Atu2633 -0.8 -1.4 RhtB family transporter compare
Atu4896 -0.7 -1.5 acetyltransferase compare
Atu0184 -0.7 -2.5 glucokinase compare
Atu0331 -0.7 -1.2 sigma-54 modulation protein compare
Atu2710 -0.7 -1.5 hypothetical protein compare
Atu1129 -0.7 -4.0 excinuclease ABC chain C compare
Atu3249 -0.7 -3.6 septum formation inhibitor compare
Atu2685 -0.7 -5.5 aconitate hydratase compare
Atu1077 -0.7 -2.1 DNA repair protein compare
Atu0641 -0.7 -2.5 hypothetical protein compare
Atu4897 -0.7 -1.0 hypothetical protein compare
Atu2217 -0.7 -3.0 hypothetical protein compare
Atu2304 -0.7 -4.3 bacteroid development protein compare
Atu0039 -0.7 -1.2 imidazoleglycerol-phosphate synthase cyclase compare
Atu0361 -0.7 -1.3 transcriptional regulator compare
Atu2728 -0.7 -1.0 beta (1-->2) glucan export ATP-binding protein compare
Atu0237 -0.7 -1.9 hypothetical protein compare
Atu1364 -0.7 -2.6 ATP-dependent Clp protease, ATP-binding subunit compare
Atu2800 -0.7 -2.3 precorrin-3B C17-methyltransferase compare
Atu0842 -0.7 -0.6 hypothetical protein compare
Atu4890 -0.7 -1.7 IS426 transposase compare
Atu0953 -0.7 -0.9 hypothetical protein compare
Atu4541 -0.7 -2.7 carboxymuconolactone decarboxylase compare
Atu4072 -0.7 -0.9 nodulation protein N compare
Atu1449 -0.7 -3.3 potassium uptake protein compare
Atu0413 -0.6 -1.1 stress induced protein compare
Atu2722 -0.6 -3.9 porin compare
Atu1967 -0.6 -2.7 hypothetical protein compare
Atu1242 -0.6 -3.8 cytochrome oxidase assembly factor compare
Atu2554 -0.6 -1.7 lysyl-tRNA synthetase compare
Atu4773 -0.6 -0.6 two component response regulator compare
Atu0422 -0.6 -1.5 ABC transporter, membrane spanning protein compare
Atu4117 -0.6 -3.3 dipeptide ABC transporter ATPase compare
Atu8054 -0.6 -0.6 hypothetical protein compare
Atu8167 -0.6 -3.9 putative transmembrane protein compare
Atu2615 -0.6 -1.5 hypothetical protein compare
Atu6165 -0.6 -0.8 hypothetical protein compare
Atu3755 -0.6 -2.5 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu4894 -0.6 -3.5 transposase compare
Atu1793 -0.6 -4.0 phosphatidylcholine synthase compare
Atu2729 -0.6 -2.0 hypothetical protein compare
Atu1838 -0.6 -1.5 ABC transporter, substrate binding protein (amino acid) compare
Atu2163 -0.6 -1.0 hypothetical protein compare
Atu1056 -0.6 -2.6 hypothetical protein compare
Atu3744 -0.6 -3.9 ABC transporter permease compare
Atu3429 -0.6 -1.0 hypothetical protein compare
Atu0689 -0.6 -4.4 ribosomal large subunit pseudouridine synthase B compare
Atu3467 -0.6 -1.3 hypothetical protein compare
Atu3248 -0.6 -2.4 cell division inhibitor compare
Atu2235 -0.6 -1.5 hypothetical protein compare
Atu3010 -0.6 -4.1 hypothetical protein compare
Atu3634 -0.6 -2.4 penicillin-binding protein dacf precursor compare
Atu1204 -0.6 -2.5 potassium uptake protein compare
Atu1213 -0.6 -1.2 hypothetical protein compare
Atu0029 -0.6 -2.7 S-adenosylhomocysteine hydrolase compare
Atu0638 -0.6 -1.4 hypothetical protein compare
Atu2746 -0.6 -2.2 hypothetical protein compare
Atu0152 -0.6 -1.5 hypothetical protein compare
Atu0434 -0.6 -1.0 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu0993 -0.6 -2.8 transcriptional regulator, TetR family compare
Atu3609 -0.5 -2.1 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
Atu1588 -0.5 -3.4 homoserine dehydrogenase compare
Atu0041 -0.5 -0.7 glutamine amidotransferase compare
Atu0499 -0.5 -3.0 hypothetical protein compare
Atu3763 -0.5 -0.3 hypothetical protein compare
Atu5045 -0.5 -1.2 hypothetical protein compare
Atu3518 -0.5 -2.9 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase compare
Atu1339 -0.5 -1.4 ribonuclease E compare
Atu4540 -0.5 -1.8 protocatechuate 3,4-dioxygenase subunit beta compare
Atu4217 -0.5 -0.3 TetR family transcriptional regulator compare
Atu2442 -0.5 -1.7 hypothetical protein compare
Atu3519 -0.5 -2.6 peptidyl-prolyl cis-trans isomerase compare
Atu1417 -0.5 -3.0 enoyl-CoA hydratase compare
Atu2184 -0.5 -2.2 transcriptional regulator, AsnC family compare
Atu8010 -0.5 -1.0 hypothetical protein compare
Atu1846 -0.5 -1.0 hypothetical protein compare
Atu8117 -0.5 -1.0 hypothetical protein compare
Atu1131 -0.5 -2.6 outer membrane protein compare
Atu3486 -0.5 -0.9 DeoR family transcriptional regulator compare
Atu3688 -0.5 -1.4 iron(III ABC transporter permease dicitrate ABC transporter permease compare
Atu1536 -0.5 -3.0 cytochrome C oxidase, FixO chain compare
Atu2083 -0.5 -1.5 DNA repair protein RecN compare
Atu2201 -0.5 -1.5 hydrolase compare
Atu1260 -0.5 -1.1 hypothetical protein compare
Atu3460 -0.5 -2.0 RhtB family transporter compare
Atu4115 -0.5 -2.3 dipeptide ABC transporter permease compare
Atu4766 -0.5 -1.6 hypothetical protein compare
Atu1039 -0.5 -1.9 DNA repair protein RecO compare
Atu2682 -0.5 -2.2 hypothetical protein compare
Atu4050 -0.5 -0.9 UTP-glucose-1-phosphate uridylyltransferase compare
Atu1344 -0.5 -1.1 hypothetical protein compare
Atu3510 -0.5 -1.5 amidohydrolase compare
Atu1546 -0.5 -1.5 transcriptional regulator, MerR family compare
Atu0939 -0.5 -1.7 PemI protein compare
Atu2462 -0.5 -1.0 hypothetical protein compare
Atu0583 -0.5 -2.0 hypothetical protein compare
Atu5146 -0.5 -1.0 hypothetical protein compare
Atu1686 -0.5 -3.7 peptidyl-prolyl cis-trans isomerse D compare
Atu0883 -0.5 -1.4 hypothetical protein compare
Atu4391 -0.5 -0.9 nitric oxide reductase NorE protein compare
Atu3697 -0.5 -1.7 ATP-dependent protease LA 2 compare
Atu3732 -0.5 -3.1 hemolysin compare
Atu0786 -0.5 -1.7 peptidase, family M16 compare
Atu8177 -0.5 -1.4 hypothetical protein compare
Atu1189 -0.5 -0.9 hypothetical protein compare
Atu0073 -0.5 -2.1 recF-like protein compare
Atu3912 -0.5 -3.0 hypothetical protein compare
Atu2802 -0.4 -2.2 precorrin-8X methylmutase compare
Atu1921 -0.4 -1.6 hypothetical protein compare
Atu1475 -0.4 -1.8 hypothetical protein compare
Atu0463 -0.4 -1.8 hypothetical protein compare
Atu4133 -0.4 -1.8 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Agrobacterium fabrum C58 in lb_sorghum f72 f505 experiments

For lb_sorghum f72 f505 LB_Sorghum F72 F505 across organisms