Experiment set18S309 for Agrobacterium fabrum C58

Compare to:

LB_Sorghum SS 20

200 most important genes:

  gene name fitness t score description  
Atu4317 -3.2 -3.8 TetR family transcriptional regulator compare
Atu8095 -3.1 -7.6 hypothetical protein compare
Atu1163 -2.9 -1.8 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu0051 -2.6 -1.8 two component sensor kinase compare
Atu1030 -2.5 -2.9 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu0912 -2.2 -2.3 Na+/H+ antiporter compare
Atu0769 -2.2 -1.5 protoheme IX farnesyltransferase compare
Atu0692 -2.2 -12.8 glutathione-regulated potassium-efflux system protein compare
Atu3009 -2.2 -2.4 exopolysaccharide production protein compare
Atu0999 -2.0 -1.9 magnesium transport protein compare
Atu3727 -1.9 -6.4 hypothetical protein compare
Atu1810 -1.9 -1.2 hypothetical protein compare
Atu0784 -1.8 -3.5 hypothetical protein compare
Atu0399 -1.8 -5.2 dihydroorotase compare
Atu3005 -1.7 -2.5 hypothetical protein compare
Atu0050 -1.7 -3.0 two component response regulator compare
Atu1739 -1.7 -3.2 permease compare
Atu0434 -1.7 -3.1 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu0184 -1.7 -3.5 glucokinase compare
Atu3008 -1.7 -1.8 hypothetical protein compare
Atu3010 -1.6 -9.2 hypothetical protein compare
Atu8191 -1.6 -1.8 hypothetical protein compare
Atu1359 -1.6 -1.9 dnaK deletion suppressor protein compare
Atu3469 -1.5 -2.6 phosphoglyceromutase compare
Atu1874 -1.5 -2.2 RecA protein compare
Atu0486 -1.5 -3.2 dihydroorotate dehydrogenase compare
Atu0030 -1.5 -2.4 phosphocarrier protein HPr compare
Atu0269 -1.5 -4.2 exodeoxyribonuclease VII large subunit compare
Atu0036 -1.5 -2.5 hypothetical protein compare
Atu2073 -1.4 -3.4 membrane protein compare
Atu8202 -1.4 -4.4 hypothetical protein compare
Atu0070 -1.4 -7.9 ribonucleoside-diphosphate reductase 2 alpha chain compare
Atu3013 -1.4 -6.7 hypothetical protein compare
Atu4613 -1.3 -10.3 glycosyltransferase compare
Atu0071 -1.3 -7.1 ribonucleoside-diphosphate reductase 2 beta chain compare
Atu2052 -1.3 -2.8 hypothetical protein compare
Atu1774 -1.3 -1.3 ABC transporter, substrate binding protein (peptide) compare
Atu1683 -1.3 -1.9 hypothetical protein compare
Atu4889 -1.3 -6.7 hypothetical protein compare
Atu3015 -1.3 -6.2 hypothetical protein compare
Atu1354 -1.3 -1.4 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase compare
Atu4617 -1.3 -8.3 dTDP-D-glucose-4,6-dehydratase compare
Atu4615 -1.3 -9.2 glucose-1-phosphate thymidylyltransferase compare
Atu1803 -1.3 -4.1 cold shock protein compare
Atu1838 -1.3 -2.7 ABC transporter, substrate binding protein (amino acid) compare
Atu3014 -1.3 -2.6 hypothetical protein compare
Atu4887 -1.3 -7.0 hypothetical protein compare
Atu2439 -1.3 -0.8 hypothetical protein compare
Atu2554 -1.2 -2.8 lysyl-tRNA synthetase compare
Atu4614 -1.2 -7.0 glycosyltransferase compare
Atu4892 -1.2 -9.3 hypothetical protein compare
Atu0331 -1.2 -1.9 sigma-54 modulation protein compare
Atu4618 -1.2 -7.1 dTDP-rhamnose-3,5-epimerase compare
Atu0251 -1.2 -9.4 hypothetical protein compare
Atu3011 -1.2 -5.1 ArsR family transcriptional regulator compare
Atu2183 -1.2 -6.9 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu3018 -1.2 -4.5 hypothetical protein compare
Atu2824 -1.2 -2.5 hypothetical protein compare
Atu1468 -1.2 -5.7 hypothetical protein compare
Atu1327 -1.1 -3.2 NADH-ubiquinone oxidoreductase compare
Atu4711 -1.1 -4.9 two component sensor kinase compare
Atu4205 -1.1 -6.1 TetR family transcriptional regulator compare
Atu2684 -1.1 -2.5 hypothetical protein compare
Atu1685 -1.1 -1.5 hypothetical protein compare
Atu4890 -1.1 -3.4 IS426 transposase compare
Atu4881 -1.1 -7.0 hypothetical protein compare
Atu1446 -1.1 -2.1 two component response regulator compare
Atu4888 -1.1 -3.6 hypothetical protein compare
Atu1099 -1.1 -3.7 hypothetical protein compare
Atu0876 -1.1 -2.0 superoxide dismutase compare
Atu2057 -1.1 -1.6 DNA helicase II compare
Atu4893 -1.1 -5.5 hypothetical protein compare
Atu3019 -1.1 -6.8 hypothetical protein compare
Atu0978 -1.1 -3.3 two component response regulator compare
Atu2083 -1.1 -2.4 DNA repair protein RecN compare
Atu0977 -1.0 -2.7 serine protease DO-like protease compare
Atu1028 -1.0 -1.6 hypothetical protein compare
Atu0690 -1.0 -2.0 hypothetical protein compare
Atu4882 -1.0 -3.2 hypothetical protein compare
Atu3353 -1.0 -6.5 mannose-1-phosphate guanylyltransferase compare
Atu3016 -1.0 -4.7 phosphoglyceromutase compare
Atu0190 -1.0 -0.7 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu1760 -1.0 -1.1 hypothetical protein compare
Atu0601 -1.0 -5.9 oxidoreductase compare
Atu0602 -0.9 -5.4 glutamine synthetase compare
Atu0062 -0.9 -5.8 transcriptional regulator, ROK family compare
Atu3910 -0.9 -3.8 LamB/YcsF family protein compare
Atu2692 -0.9 -3.4 intracellular septation protein compare
Atu0044 -0.9 -3.5 heat shock protein hslV compare
Atu2640 -0.9 -2.3 hypothetical protein compare
Atu3311 -0.9 -7.5 phosphomannose isomerase compare
Atu0189 -0.9 -0.8 ABC transporter, membrane spanning protein (peptide) compare
Atu0298 -0.9 -4.1 orotidine 5 compare
Atu1364 -0.9 -3.1 ATP-dependent Clp protease, ATP-binding subunit compare
Atu1619 -0.9 -1.1 protein-export membrane protein SECG compare
Atu4880 -0.9 -6.0 AraC family transcriptional regulator compare
Atu0400 -0.9 -3.1 orotate phosphoribosyltransferase compare
Atu4166 -0.9 -2.9 UDP-glucose 4-epimerase compare
Atu0368 -0.9 -3.8 tRNA pseudouridine synthase I compare
Atu3598 -0.9 -1.1 thiol:disulfide interchange protein compare
Atu0388 -0.9 -4.7 two component sensor kinase compare
Atu0319 -0.8 -1.4 ubiquinone biosynthesis protein compare
Atu0188 -0.8 -0.5 ABC transporter, membrane spanning protein (peptide) compare
Atu3006 -0.8 -3.5 hypothetical protein compare
Atu3249 -0.8 -4.0 septum formation inhibitor compare
Atu3021 -0.8 -4.8 sugar ABC transporter ATPase compare
Atu3017 -0.8 -1.8 phosphoglyceromutase compare
Atu4884 -0.8 -2.9 hypothetical protein compare
Atu2787 -0.8 -1.0 hypothetical protein compare
Atu0971 -0.8 -0.9 two component sensor kinase compare
Atu2831 -0.8 -2.8 glucose inhibited division protein A compare
Atu0344 -0.8 -2.5 hypothetical protein compare
Atu1103 -0.8 -2.2 rRNA-adenine N6,N6-dimethyltransferase compare
Atu1513 -0.8 -2.5 ABC excinuclease subunit A compare
Atu1077 -0.8 -2.3 DNA repair protein compare
Atu1129 -0.8 -4.2 excinuclease ABC chain C compare
Atu3248 -0.8 -3.6 cell division inhibitor compare
Atu2650 -0.8 -5.8 glycerol-3-phosphate dehydrogenase compare
Atu6189 -0.8 -1.5 protein secretion chaperone compare
Atu4894 -0.7 -4.4 transposase compare
Atu1204 -0.7 -3.2 potassium uptake protein compare
Atu0141 -0.7 -0.7 cytochrome O ubiquinol oxidase subunit I compare
Atu3012 -0.7 -1.6 hypothetical protein compare
Atu0422 -0.7 -1.4 ABC transporter, membrane spanning protein compare
Atu2125 -0.7 -1.1 ABC transporter, nucleotide binding/ATPase protein compare
Atu4610 -0.7 -4.0 sugar nucleotide epimerase/dehydratase compare
Atu2728 -0.7 -1.0 beta (1-->2) glucan export ATP-binding protein compare
Atu1449 -0.7 -4.0 potassium uptake protein compare
Atu2616 -0.7 -1.5 hypothetical protein compare
Atu2832 -0.7 -2.2 tRNA modification GTPase compare
Atu1219 -0.7 -1.1 hypothetical protein compare
Atu3732 -0.7 -5.1 hemolysin compare
Atu3337 -0.7 -4.8 LacI family transcriptional regulator compare
Atu1258 -0.7 -2.3 ATP-dependent Clp protease, proteolytic subunit compare
Atu0923 -0.7 -1.9 hypothetical protein compare
Atu3023 -0.7 -4.3 sugar ABC transporter permease compare
Atu2615 -0.7 -1.4 hypothetical protein compare
Atu0142 -0.6 -1.3 cytochrome o ubiquinol oxidase subunit II compare
Atu8158 -0.6 -1.5 hypothetical protein compare
Atu2207 -0.6 -1.9 two component sensor kinase compare
Atu2685 -0.6 -5.2 aconitate hydratase compare
Atu8096 -0.6 -1.6 hypothetical protein compare
Atu1844 -0.6 -1.6 Phosphoribosylformylglycinamidine synthetase compare
Atu3739 -0.6 -2.3 phosphoglycerate kinase compare
Atu3486 -0.6 -1.6 DeoR family transcriptional regulator compare
Atu2555 -0.6 -2.0 L-lysine 2,3-aminomutase compare
Atu0045 -0.6 -4.4 heat shock chaperone compare
Atu3022 -0.6 -4.1 sugar ABC transporter permease compare
Atu4878 -0.6 -3.5 hypothetical protein compare
Atu3020 -0.6 -3.4 GntR family transcriptional regulator compare
Atu8167 -0.6 -4.1 putative transmembrane protein compare
Atu4879 -0.6 -3.8 hypothetical protein compare
Atu0272 -0.6 -1.9 transcriptional regulator, MarR family compare
Atu3744 -0.6 -4.7 ABC transporter permease compare
Atu3608 -0.6 -2.3 hypothetical protein compare
Atu2304 -0.6 -4.0 bacteroid development protein compare
Atu1308 -0.6 -3.4 aspartate carbamoyl transferase catalytic subunit compare
Atu4541 -0.6 -2.7 carboxymuconolactone decarboxylase compare
Atu1902 -0.6 -3.5 transketolase compare
Atu0533 -0.6 -1.2 putative inhibitor of septum formation compare
Atu6131 -0.6 -3.3 TraR Antiactivator compare
Atu3120 -0.6 -0.9 hypothetical protein compare
Atu4077 -0.6 -4.1 glycogen branching protein compare
Atu1417 -0.6 -3.0 enoyl-CoA hydratase compare
Atu5146 -0.6 -1.7 hypothetical protein compare
Atu5123 -0.6 -4.9 acetolactate synthase catalytic subunit compare
Atu0419 -0.6 -1.8 two component sensor kinase compare
Atu2799 -0.6 -2.5 precorrin-6x reductase compare
Atu2001 -0.6 -3.6 excinuclease ABC subunit B compare
Atu4133 -0.6 -1.4 hypothetical protein compare
Atu4616 -0.6 -0.9 dTDP-4-dehydrorhamnose reductase compare
Atu4177 -0.6 -4.3 ATP-dependent Clp protease, ATP-binding subunit compare
Atu3481 -0.6 -2.7 enoyl-CoA hydratase compare
Atu2694 -0.6 -0.9 hypothetical protein compare
Atu5045 -0.6 -1.6 hypothetical protein compare
Atu3663 -0.6 -1.5 hypothetical protein compare
Atu1380 -0.6 -3.9 zinc metallopeptidase compare
Atu2163 -0.6 -0.8 hypothetical protein compare
Atu4346 -0.5 -2.3 hypothetical protein compare
Atu2184 -0.5 -2.3 transcriptional regulator, AsnC family compare
Atu2192 -0.5 -1.0 hypothetical protein compare
Atu3496 -0.5 -1.8 hypothetical protein compare
Atu1475 -0.5 -1.8 hypothetical protein compare
Atu2682 -0.5 -2.0 hypothetical protein compare
Atu2237 -0.5 -2.6 cytochrome c1 compare
Atu3609 -0.5 -2.5 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
Atu3898 -0.5 -3.0 DeoR family transcriptional regulator compare
Atu1904 -0.5 -1.3 transcriptional regulator compare
Atu2800 -0.5 -1.1 precorrin-3B C17-methyltransferase compare
Atu3712 -0.5 -0.8 hypothetical protein compare
Atu4873 -0.5 -2.6 TetR family transcriptional regulator compare
Atu0153 -0.5 -3.1 transcriptional regulator, Fur family compare
Atu1039 -0.5 -2.2 DNA repair protein RecO compare
Atu8159 -0.5 -0.9 hypothetical protein compare
Atu3517 -0.5 -2.5 acetyltransferase compare
Atu1175 -0.5 -1.1 hypothetical protein compare
Atu0647 -0.5 -2.4 phosphoribosylamine--glycine ligase compare
Atu4406 -0.5 -1.0 periplasmic nitrate reductase, ferredoxin-like protein compare
Atu3461 -0.5 -1.2 GntR family transcriptional regulator compare
Atu2606 -0.5 -1.9 transcriptional regulator, GntR family compare


Specific Phenotypes

None in this experiment

For Agrobacterium fabrum C58 in lb_sorghum ss 20 experiments

For lb_sorghum ss 20 LB_Sorghum SS 20 across organisms