Experiment set18S308 for Agrobacterium fabrum C58

Compare to:

LB_Sorghum SS 20

Group: lb_sorghum ss 20
Media: Sorghum SS 20_LB + LB_Sorghum SS 20
Culturing: Agro_ML11b, tube, Aerobic, at 28 (C), shaken=200 rpm
By: Mitchell Thompson on 6/16/23

Specific Phenotypes

For 2 genes in this experiment

For lb_sorghum ss 20 LB_Sorghum SS 20 in Agrobacterium fabrum C58

For lb_sorghum ss 20 LB_Sorghum SS 20 across organisms

SEED Subsystems

Subsystem #Specific
Ribonucleotide reduction 2

Metabolic Maps

Color code by fitness: see overview map or list of maps.

Maps containing gene(s) with specific phenotypes:

MetaCyc Pathways

Pathways that contain genes with specific phenotypes:

Pathway #Steps #Present #Specific
adenosine deoxyribonucleotides de novo biosynthesis I 2 2 1
guanosine deoxyribonucleotides de novo biosynthesis I 2 2 1
guanosine deoxyribonucleotides de novo biosynthesis II 4 3 2
adenosine deoxyribonucleotides de novo biosynthesis II 4 3 2
superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) 14 12 4
superpathway of adenosine nucleotides de novo biosynthesis II 7 6 2
superpathway of guanosine nucleotides de novo biosynthesis II 8 7 2
pyrimidine deoxyribonucleotides de novo biosynthesis I 9 9 2
pyrimidine deoxyribonucleotides de novo biosynthesis III 9 8 2
superpathway of adenosine nucleotides de novo biosynthesis I 5 5 1
superpathway of guanosine nucleotides de novo biosynthesis I 6 6 1
superpathway of purine nucleotides de novo biosynthesis II 26 23 4
pyrimidine deoxyribonucleotides de novo biosynthesis IV 7 6 1
pyrimidine deoxyribonucleotides biosynthesis from CTP 8 7 1
superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis 18 17 2
superpathway of purine nucleotides de novo biosynthesis I 21 21 2
superpathway of histidine, purine, and pyrimidine biosynthesis 46 42 4
superpathway of purine nucleotide salvage 14 13 1