Experiment set18S302 for Agrobacterium fabrum C58

Compare to:

LB_Tomato_root

200 most important genes:

  gene name fitness t score description  
Atu8095 -3.0 -9.0 hypothetical protein compare
Atu8025 -2.9 -2.5 hypothetical protein compare
Atu0030 -2.4 -2.2 phosphocarrier protein HPr compare
Atu2183 -2.4 -12.1 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu4166 -2.4 -3.9 UDP-glucose 4-epimerase compare
Atu4618 -2.4 -10.3 dTDP-rhamnose-3,5-epimerase compare
Atu2684 -2.3 -3.0 hypothetical protein compare
Atu0999 -2.2 -1.5 magnesium transport protein compare
Atu4617 -2.2 -9.3 dTDP-D-glucose-4,6-dehydratase compare
Atu0912 -2.2 -1.8 Na+/H+ antiporter compare
Atu0486 -2.2 -4.8 dihydroorotate dehydrogenase compare
Atu0784 -2.1 -3.7 hypothetical protein compare
Atu4613 -2.1 -12.0 glycosyltransferase compare
Atu0692 -2.1 -10.3 glutathione-regulated potassium-efflux system protein compare
Atu0189 -2.1 -1.2 ABC transporter, membrane spanning protein (peptide) compare
Atu4615 -2.0 -9.4 glucose-1-phosphate thymidylyltransferase compare
Atu4614 -2.0 -9.6 glycosyltransferase compare
Atu3353 -2.0 -10.1 mannose-1-phosphate guanylyltransferase compare
Atu1103 -2.0 -3.3 rRNA-adenine N6,N6-dimethyltransferase compare
Atu8096 -1.9 -2.1 hypothetical protein compare
Atu6189 -1.8 -2.1 protein secretion chaperone compare
Atu1739 -1.8 -3.4 permease compare
Atu1359 -1.8 -1.5 dnaK deletion suppressor protein compare
Atu3311 -1.8 -11.6 phosphomannose isomerase compare
Atu0972 -1.8 -3.1 lipA protein compare
Atu3009 -1.8 -1.4 exopolysaccharide production protein compare
Atu0923 -1.8 -6.1 hypothetical protein compare
Atu0399 -1.7 -4.8 dihydroorotase compare
Atu3727 -1.7 -4.7 hypothetical protein compare
Atu4616 -1.7 -1.8 dTDP-4-dehydrorhamnose reductase compare
Atu1803 -1.7 -4.4 cold shock protein compare
Atu4317 -1.7 -2.7 TetR family transcriptional regulator compare
Atu2083 -1.6 -3.5 DNA repair protein RecN compare
Atu1774 -1.6 -1.1 ABC transporter, substrate binding protein (peptide) compare
Atu6098 -1.6 -1.3 transcriptional regulator, HTH family compare
Atu8191 -1.5 -1.4 hypothetical protein compare
Atu0978 -1.5 -4.2 two component response regulator compare
Atu0641 -1.5 -3.7 hypothetical protein compare
Atu1566 -1.5 -1.4 hypothetical protein compare
Atu0580 -1.5 -2.7 flagellar biosynthetic protein compare
Atu3299 -1.4 -2.2 hypothetical protein compare
Atu1874 -1.4 -2.2 RecA protein compare
Atu0894 -1.4 -2.1 ABC transporter, membrane spanning protein compare
Atu2439 -1.3 -0.6 hypothetical protein compare
Atu2554 -1.3 -3.0 lysyl-tRNA synthetase compare
Atu0331 -1.3 -1.7 sigma-54 modulation protein compare
Atu0977 -1.3 -2.7 serine protease DO-like protease compare
Atu0251 -1.3 -8.0 hypothetical protein compare
Atu0533 -1.3 -1.8 putative inhibitor of septum formation compare
Atu0925 -1.3 -2.0 hypothetical protein compare
Atu2125 -1.2 -0.9 ABC transporter, nucleotide binding/ATPase protein compare
Atu1513 -1.2 -3.3 ABC excinuclease subunit A compare
Atu1028 -1.2 -1.9 hypothetical protein compare
Atu1030 -1.2 -1.5 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu2057 -1.2 -1.7 DNA helicase II compare
Atu2464 -1.2 -2.1 formyltetrahydrofolate deformylase compare
Atu1364 -1.2 -3.9 ATP-dependent Clp protease, ATP-binding subunit compare
Atu2376 -1.2 -3.6 hypothetical protein compare
Atu1099 -1.2 -4.1 hypothetical protein compare
Atu1853 -1.1 -3.0 hypothetical protein compare
Atu1163 -1.1 -1.0 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu4205 -1.1 -5.4 TetR family transcriptional regulator compare
Atu0050 -1.1 -2.5 two component response regulator compare
Atu0400 -1.1 -3.4 orotate phosphoribosyltransferase compare
Atu2633 -1.1 -1.1 RhtB family transporter compare
Atu2616 -1.1 -1.9 hypothetical protein compare
Atu0368 -1.1 -3.7 tRNA pseudouridine synthase I compare
Atu1219 -1.1 -1.3 hypothetical protein compare
Atu0602 -1.1 -6.3 glutamine synthetase compare
Atu3663 -1.1 -1.3 hypothetical protein compare
Atu1810 -1.1 -0.7 hypothetical protein compare
Atu1354 -1.0 -0.8 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase compare
Atu3603 -1.0 -1.8 two component response regulator compare
Atu2184 -1.0 -2.7 transcriptional regulator, AsnC family compare
Atu3517 -1.0 -2.7 acetyltransferase compare
Atu0101 -1.0 -2.5 cytochrome c compare
Atu0544 -1.0 -1.7 hypothetical protein compare
Atu1760 -1.0 -0.8 hypothetical protein compare
Atu0601 -1.0 -5.1 oxidoreductase compare
Atu0190 -1.0 -0.9 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu0188 -1.0 -0.6 ABC transporter, membrane spanning protein (peptide) compare
Atu0434 -1.0 -1.7 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu0298 -0.9 -3.7 orotidine 5 compare
Atu2832 -0.9 -2.2 tRNA modification GTPase compare
Atu0044 -0.9 -4.5 heat shock protein hslV compare
Atu0269 -0.9 -2.9 exodeoxyribonuclease VII large subunit compare
Atu0045 -0.9 -6.2 heat shock chaperone compare
Atu1536 -0.9 -3.0 cytochrome C oxidase, FixO chain compare
Atu8167 -0.9 -5.6 putative transmembrane protein compare
Atu1446 -0.9 -1.4 two component response regulator compare
Atu2800 -0.9 -2.0 precorrin-3B C17-methyltransferase compare
Atu2831 -0.9 -3.1 glucose inhibited division protein A compare
Atu2692 -0.9 -2.6 intracellular septation protein compare
Atu1327 -0.9 -1.6 NADH-ubiquinone oxidoreductase compare
Atu0149 -0.9 -2.0 enoyl-(acyl-carrier-protein) reductase compare
Atu3248 -0.9 -3.9 cell division inhibitor compare
Atu3010 -0.9 -5.8 hypothetical protein compare
Atu4711 -0.9 -4.9 two component sensor kinase compare
Atu1677 -0.9 -2.3 queuine tRNA-ribosyltransferase compare
Atu3740 -0.8 -5.4 fructose bisphosphate aldolase compare
Atu2728 -0.8 -1.1 beta (1-->2) glucan export ATP-binding protein compare
Atu4407 -0.8 -2.7 periplasmic nitrate reductase, NapD protein compare
Atu0786 -0.8 -2.6 peptidase, family M16 compare
Atu1475 -0.8 -1.0 hypothetical protein compare
Atu4187 -0.8 -1.0 tRNA-Met compare
Atu2729 -0.8 -2.2 hypothetical protein compare
Atu4040 -0.8 -1.9 hypothetical protein compare
Atu2640 -0.8 -1.8 hypothetical protein compare
Atu3006 -0.8 -3.1 hypothetical protein compare
Atu2824 -0.8 -2.1 hypothetical protein compare
Atu3014 -0.8 -1.9 hypothetical protein compare
Atu1530 -0.8 -4.1 nitrogen fixation protein FixG compare
Atu1967 -0.8 -3.9 hypothetical protein compare
Atu0141 -0.8 -0.6 cytochrome O ubiquinol oxidase subunit I compare
Atu1537 -0.8 -4.4 cytochrome-c oxidase, FixN chain compare
Atu4894 -0.8 -4.5 transposase compare
Atu3609 -0.8 -3.3 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
Atu1527 -0.8 -2.4 nitrogen fixation protein FixS compare
Atu1535 -0.8 -2.4 cytochrome c oxidase, FixQ chain compare
Atu0237 -0.8 -1.7 hypothetical protein compare
Atu2237 -0.8 -3.7 cytochrome c1 compare
Atu1129 -0.8 -3.6 excinuclease ABC chain C compare
Atu3469 -0.8 -1.5 phosphoglyceromutase compare
Atu2191 -0.8 -3.4 transcriptional regulator, LysR family compare
Atu2722 -0.7 -3.9 porin compare
Atu1705 -0.7 -2.0 SEC-independent protein translocase protein compare
Atu3429 -0.7 -1.0 hypothetical protein compare
Atu2207 -0.7 -1.9 two component sensor kinase compare
Atu3115 -0.7 -2.0 TetR family transcriptional regulator compare
Atu1077 -0.7 -2.1 DNA repair protein compare
Atu2239 -0.7 -1.8 ubiquinol-cytochrome C reductase iron-sulfur subunit compare
Atu2634 -0.7 -1.5 hypothetical protein compare
Atu2685 -0.7 -4.8 aconitate hydratase compare
Atu1602 -0.7 -3.9 transcriptional activator, Crp family compare
Atu5164 -0.7 -0.8 type IV secretion protein AvhB3 compare
Atu1074 -0.7 -4.0 NAD/NADP dependent oxidoreductase compare
Atu0508 -0.7 -2.6 PH Adaption potassium efflux system compare
Atu3215 -0.7 -3.0 oligopeptide ABC transporter ATPase compare
Atu0036 -0.7 -0.6 hypothetical protein compare
Atu8010 -0.7 -1.8 hypothetical protein compare
Atu1847 -0.7 -1.6 hypothetical protein compare
Atu1468 -0.7 -4.2 hypothetical protein compare
Atu3270 -0.7 -1.0 hypothetical protein compare
Atu1970 -0.7 -1.7 hypothetical protein compare
Atu1308 -0.7 -2.8 aspartate carbamoyl transferase catalytic subunit compare
Atu3739 -0.7 -1.1 phosphoglycerate kinase compare
Atu3688 -0.7 -1.6 iron(III ABC transporter permease dicitrate ABC transporter permease compare
Atu0566 -0.7 -0.7 hypothetical protein compare
Atu1546 -0.7 -1.6 transcriptional regulator, MerR family compare
Atu1686 -0.6 -5.0 peptidyl-prolyl cis-trans isomerse D compare
Atu2304 -0.6 -3.8 bacteroid development protein compare
Atu2140 -0.6 -2.0 hypothetical protein compare
Atu4610 -0.6 -3.2 sugar nucleotide epimerase/dehydratase compare
Atu0938 -0.6 -1.4 transcriptional regulator, MerR family compare
Atu2267 -0.6 -3.2 hypothetical protein compare
Atu0751 -0.6 -2.5 ABC transporter, nucleotide binding/ATPase protein (cobalt) compare
Atu3460 -0.6 -3.2 RhtB family transporter compare
Atu4540 -0.6 -1.6 protocatechuate 3,4-dioxygenase subunit beta compare
Atu0939 -0.6 -1.8 PemI protein compare
Atu1793 -0.6 -3.4 phosphatidylcholine synthase compare
Atu1470 -0.6 -0.8 Camphor resistance protein compare
Atu0706 -0.6 -2.8 transcriptional regulator, IclR family compare
Atu2620 -0.6 -0.9 hypothetical protein compare
Atu2379 -0.6 -3.3 phosphomannomutase compare
Atu0272 -0.6 -2.0 transcriptional regulator, MarR family compare
Atu2626 -0.6 -1.5 hypothetical protein compare
Atu2555 -0.6 -2.1 L-lysine 2,3-aminomutase compare
Atu3335 -0.6 -2.8 3-methyladenine DNA glycosylase compare
Atu2235 -0.6 -1.0 hypothetical protein compare
Atu0895 -0.6 -1.0 ABC transporter, substrate binding protein compare
Atu3780 -0.6 -1.8 hypothetical protein compare
Atu0031 -0.6 -0.5 PTS system, IIA component compare
Atu3634 -0.6 -1.3 penicillin-binding protein dacf precursor compare
Atu4117 -0.6 -2.8 dipeptide ABC transporter ATPase compare
Atu0167 -0.6 -2.0 transcriptional regulator, AraC family compare
Atu1836 -0.6 -1.0 hypothetical protein compare
Atu3518 -0.6 -2.8 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase compare
Atu4882 -0.6 -1.6 hypothetical protein compare
Atu5493 -0.6 -1.5 hypothetical protein compare
Atu2650 -0.5 -3.0 glycerol-3-phosphate dehydrogenase compare
Atu0401 -0.5 -2.0 fructokinase compare
Atu3249 -0.5 -2.4 septum formation inhibitor compare
Atu2238 -0.5 -3.5 ubiquinol-cytochrome c reductase cytochrome b subunit compare
Atu1844 -0.5 -1.1 Phosphoribosylformylglycinamidine synthetase compare
Atu1307 -0.5 -2.4 dihydroorotase compare
Atu1258 -0.5 -1.6 ATP-dependent Clp protease, proteolytic subunit compare
Atu2052 -0.5 -1.5 hypothetical protein compare
Atu0973 -0.5 -3.1 cycH protein compare
Atu2799 -0.5 -1.8 precorrin-6x reductase compare
Atu3604 -0.5 -0.7 hypoxanthine phosphoribosyltransferase compare
Atu1528 -0.5 -3.9 nitrogen fixation protein FixI compare
Atu2515 -0.5 -2.5 ABC transporter, nucleotide binding/ATPase protein (dipeptide) compare
Atu3763 -0.5 -0.3 hypothetical protein compare
Atu2130 -0.5 -2.7 hypothetical protein compare
Atu1491 -0.5 -2.4 sodium bile acid symporter family protein compare
Atu0388 -0.5 -2.9 two component sensor kinase compare
Atu1173 -0.5 -3.0 MFS permease compare
Atu3608 -0.5 -2.5 hypothetical protein compare
Atu0572 -0.5 -0.5 hypothetical protein compare
Atu0479 -0.5 -2.8 ABC transporter, substrate binding protein (amino acid) compare


Specific Phenotypes

None in this experiment

For Agrobacterium fabrum C58 in lb_tomato_root experiments

For lb_tomato_root LB_Tomato_root across organisms