Experiment set18S297 for Agrobacterium fabrum C58

Compare to:

LB_Benthi_root

200 most detrimental genes:

  gene name fitness t score description  
Atu3468 +1.2 1.4 hypothetical protein compare
Atu2067 +1.0 1.4 hypothetical protein compare
Atu0888 +1.0 4.6 transcriptional regulator, MerR family compare
Atu0381 +1.0 1.8 hypothetical protein compare
Atu4677 +0.9 1.4 hypothetical protein compare
Atu1570 +0.9 1.2 hypothetical protein compare
Atu8018 +0.8 1.2 hypothetical protein compare
Atu1149 +0.8 0.9 adenylate cyclase compare
Atu2063 +0.8 2.1 hypothetical protein compare
Atu8087 +0.8 1.1 putative peptidoglycan binding protein compare
Atu1629 +0.8 1.5 transcriptional regulator, ArsR family compare
Atu0115 +0.7 1.0 hypothetical protein compare
Atu2192 +0.7 1.4 hypothetical protein compare
Atu1619 +0.7 1.2 protein-export membrane protein SECG compare
Atu4144 +0.7 1.1 hypothetical protein compare
Atu3794 +0.7 3.5 FadR family transcriptional regulator compare
Atu1062 +0.7 1.7 phosphatidylserine synthase compare
Atu8156 +0.7 3.7 hypothetical protein compare
Atu4792 +0.7 1.6 hypothetical protein compare
Atu0041 +0.7 1.5 glutamine amidotransferase compare
Atu1338 +0.7 4.5 3-oxoacyl-(acyl carrier protein) reductase compare
Atu0986 +0.7 1.3 hypothetical protein compare
Atu4234 +0.7 3.8 amino acid ABC transporter permease compare
Atu3031 +0.6 1.1 hypothetical protein compare
Atu8144 +0.6 2.5 hypothetical protein compare
Atu8019 +0.6 2.4 hypothetical protein compare
Atu8126 +0.6 2.7 putative phage tail protein I compare
Atu8143 +0.6 2.4 hypothetical protein compare
Atu5121 +0.6 4.0 two component response regulator compare
Atu8162 +0.6 0.8 hypothetical protein compare
Atu2058 +0.6 2.1 hypothetical protein compare
Atu0843 +0.6 4.4 P type cation (metal) transporter, ATPase component compare
Atu5430 +0.5 0.7 hypothetical protein compare
Atu2187 +0.5 2.4 transcriptional regulator, ArsR family compare
Atu1511 +0.5 1.8 hypothetical protein compare
Atu1968 +0.5 1.2 hypothetical protein compare
Atu3345 +0.5 1.8 6-pyruvoyl tetrahydrobiopterin synthase compare
Atu0755 +0.5 2.2 hypothetical protein compare
Atu3032 +0.5 1.9 hypothetical protein compare
Atu3614 +0.5 2.7 glyoxalase II compare
Atu6039 +0.5 2.0 conjugal transfer protein compare
Atu0031 +0.5 0.5 PTS system, IIA component compare
Atu2450 +0.5 1.7 hypothetical protein compare
Atu0026 +0.5 0.6 hypothetical protein compare
Atu3791 +0.5 3.2 L-asparaginase compare
Atu8032 +0.5 1.5 hypothetical protein compare
Atu1846 +0.5 1.0 hypothetical protein compare
Atu4406 +0.5 2.2 periplasmic nitrate reductase, ferredoxin-like protein compare
Atu8176 +0.5 1.2 hypothetical protein compare
Atu2677 +0.5 2.1 protein tyrosine phosphatase compare
Atu5088 +0.5 1.5 hypothetical protein compare
Atu0795 +0.5 0.8 hypothetical protein compare
Atu1320 +0.5 2.2 acetyltransferase compare
Atu1241 +0.5 1.4 hypothetical protein compare
Atu3183 +0.5 0.5 hypothetical protein compare
Atu8082 +0.5 1.1 hypothetical protein compare
Atu2271 +0.5 3.0 urease accessory protein compare
Atu1842 +0.5 2.7 hypothetical protein compare
Atu0421 +0.5 1.0 ABC transporter, membrane spanning protein compare
Atu2433 +0.5 0.8 hypothetical protein compare
Atu0824 +0.5 0.8 hypothetical protein compare
Atu3733 +0.4 1.4 hypothetical protein compare
Atu5128 +0.4 3.6 ABC transporter membrane spanning protein (mannopine) compare
Atu2603 +0.4 2.0 ABC transporter, membrane spanning protein (maltose) compare
Atu8157 +0.4 2.5 hypothetical protein compare
Atu0039 +0.4 0.6 imidazoleglycerol-phosphate synthase cyclase compare
Atu5440 +0.4 2.4 hypothetical protein compare
Atu8181 +0.4 1.1 hypothetical protein compare
Atu4527 +0.4 0.7 hypothetical protein compare
Atu1889 +0.4 1.2 diacylglycerol kinase compare
Atu2764 +0.4 2.3 hypothetical protein compare
Atu2676 +0.4 1.6 4a-hydroxytetrahydrobiopterin dehydratase compare
Atu0679 +0.4 2.2 ATP phosphoribosyltransferase compare
Atu0375 +0.4 1.1 small heat shock protein compare
Atu1737 +0.4 1.2 hypothetical protein compare
Atu4437 +0.4 2.3 LysR family transcriptional regulator compare
Atu8036 +0.4 1.9 protein YBGT-like protein compare
Atu2293 +0.4 1.1 hypothetical protein compare
Atu5052 +0.4 2.3 small heat shock protein compare
Atu8085 +0.4 1.6 hypothetical protein compare
Atu2792 +0.4 3.0 hypothetical protein compare
Atu0166 +0.4 2.3 hypothetical protein compare
Atu1185 +0.4 1.5 hypothetical protein compare
Atu5129 +0.4 3.3 ABC transporter substrate binding protein (mannopine) compare
Atu4445 +0.4 2.3 ABC transporter permease compare
Atu2028 +0.4 1.3 transcriptional regulator, ArsR family compare
Atu5118 +0.4 2.6 hypothetical protein compare
Atu5116 +0.4 2.4 transcriptional regulator protein compare
Atu0210 +0.4 2.7 hypothetical protein compare
Atu2368 +0.4 0.8 hypothetical protein compare
Atu3193 +0.4 2.0 MarR family transcriptional regulator compare
Atu5046 +0.4 1.7 hypothetical protein compare
Atu4753 +0.4 1.9 amino acid ABC transporter permease compare
Atu1840 +0.4 2.6 hypothetical protein compare
Atu0181 +0.4 1.4 hypothetical protein compare
Atu8190 +0.4 2.1 hypothetical protein compare
Atu0348 +0.4 2.2 hypothetical protein compare
Atu8180 +0.4 1.7 hypothetical protein compare
Atu5163 +0.4 1.0 type IV secretion protein AvhB2 compare
Atu1026 +0.4 0.9 hypothetical protein compare
Atu5159 +0.4 1.2 hypothetical protein compare
Atu2683 +0.4 0.8 hypothetical protein compare
Atu0520 +0.4 1.2 chemotaxis receiver protein compare
Atu4232 +0.4 1.9 GntR family transcriptional regulator compare
Atu3434 +0.4 2.0 oligopeptide ABC transporter permease compare
Atu4797 +0.4 1.9 glucose-1-phosphate cytidylyltransferase compare
Atu1457 +0.4 1.2 hypothetical protein compare
Atu5166 +0.4 1.7 type IV secretion protein AvhB5 compare
Atu5501 +0.4 0.7 hypothetical protein compare
Atu1368 +0.4 2.4 hypothetical protein compare
Atu8151 +0.4 0.9 hypothetical protein compare
Atu1291 +0.4 0.9 hypothetical protein compare
Atu0553 +0.4 1.9 flagellar hook-basal body complex protein compare
Atu3175 +0.4 2.1 hypothetical protein compare
Atu0772 +0.4 2.1 hypothetical protein compare
Atu2439 +0.4 0.3 hypothetical protein compare
Atu2162 +0.4 2.3 periplasmic immunogenic protein compare
Atu2166 +0.4 1.5 hypothetical protein compare
Atu4360 +0.4 1.6 sugar ABC transporter permease compare
Atu5155 +0.4 1.7 MarR family transcriptional regulator compare
Atu2424 +0.4 1.6 ABC transporter, nucleotide binding/ATPase protein compare
Atu5186 +0.4 1.1 hypothetical protein compare
Atu5119 +0.4 2.8 two component response regulator compare
Atu1641 +0.4 1.8 hypothetical protein compare
Atu0528 +0.4 1.2 large conductance mechanosensitive channel protein compare
Atu3457 +0.4 1.7 ABC transporter permease compare
Atu1550 +0.4 1.8 polypeptide deformylase compare
Atu2584 +0.4 1.9 hypothetical protein compare
Atu1031 +0.4 1.3 hypothetical protein compare
Atu3730 +0.4 0.4 hypothetical protein compare
Atu1649 +0.4 2.3 hypothetical protein compare
Atu2436 +0.4 2.0 hypothetical protein compare
Atu4737 +0.4 1.1 hypothetical protein compare
Atu8161 +0.4 0.6 hypothetical protein compare
Atu1882 +0.3 1.8 usg protein compare
Atu1799 +0.3 2.2 hypothetical protein compare
Atu1311 +0.3 2.2 acetyltransferase compare
Atu2137 +0.3 1.9 hypothetical protein compare
Atu0874 +0.3 1.6 acetyltransferase compare
Atu0378 +0.3 1.7 hydrolase compare
Atu5162 +0.3 2.1 type IV secretion protein AvhB1 compare
Atu2660 +0.3 1.7 hypothetical protein compare
Atu0537 +0.3 2.1 histidinol dehydrogenase compare
Atu5544 +0.3 2.1 hypothetical protein compare
Atu0236 +0.3 1.0 hypothetical protein compare
Atu4380 +0.3 1.9 Crp family transcriptional regulator compare
Atu1892 +0.3 1.4 hypothetical protein compare
Atu0809 +0.3 0.7 hypothetical protein compare
Atu1743 +0.3 2.5 hypothetical protein compare
Atu4369 +0.3 1.9 sugar ABC transporter substrate-binding protein compare
Atu5142 +0.3 0.7 hypothetical protein compare
Atu2605 +0.3 1.1 hypothetical protein compare
Atu0703 +0.3 1.1 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase compare
Atu0525 +0.3 1.9 transcriptional regulator, LuxR family compare
Atu1177 +0.3 1.0 hypothetical protein compare
Atu3867 +0.3 2.2 hypothetical protein compare
Atu5427 +0.3 0.8 hypothetical protein compare
Atu3497 +0.3 1.0 hypothetical protein compare
Atu1727 +0.3 1.5 hypothetical protein compare
Atu3054 +0.3 2.2 hypothetical protein compare
Atu0014 +0.3 2.3 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase compare
Atu1221 +0.3 1.5 hypothetical protein compare
Atu4425 +0.3 1.8 inosine-uridine preferring nucleoside hydrolase compare
Atu5471 +0.3 1.5 hypothetical protein compare
Atu0386 +0.3 0.7 hypothetical protein compare
Atu1858 +0.3 0.9 hypothetical protein compare
Atu8063 +0.3 1.4 hypothetical protein compare
Atu3267 +0.3 1.1 dipeptide ABC transporter permease compare
Atu1884 +0.3 1.5 ABC transporter, substrate binding protein (aliphatic sulfonate) compare
Atu2502 +0.3 2.2 heme oxygenase compare
Atu1897 +0.3 1.4 short chain dehydrogenase compare
Atu5165 +0.3 2.4 type IV secretion protein AvhB4 compare
Atu4674 +0.3 2.1 GntR family transcriptional regulator compare
Atu3432 +0.3 1.6 desulfurizing enzyme compare
Atu3073 +0.3 1.9 aspartate racemase compare
Atu4740 +0.3 1.0 zinc-binding dehydrogenase compare
Atu1492 +0.3 2.3 transcriptional regulator, ArsR family compare
Atu6165 +0.3 0.7 hypothetical protein compare
Atu2634 +0.3 0.5 hypothetical protein compare
Atu1301 +0.3 1.3 hypothetical protein compare
Atu3415 +0.3 1.4 ABC transporter substrate binding protein compare
Atu3119 +0.3 1.9 hypothetical protein compare
Atu1827 +0.3 1.8 hypothetical protein compare
Atu1250 +0.3 1.8 hypothetical protein compare
Atu1453 +0.3 1.7 hypothetical protein compare
Atu2141 +0.3 1.2 hypothetical protein compare
Atu3537 +0.3 1.2 hypothetical protein compare
Atu2081 +0.3 1.5 aminoglycoside phosphotransferase compare
Atu1584 +0.3 1.2 hypothetical protein compare
Atu3578 +0.3 1.1 glycerol-3-phosphate dehydrogenase compare
Atu2276 +0.3 1.7 ABC transporter, substrate binding protein (branched chain amino acid) compare
Atu0885 +0.3 0.8 hypothetical protein compare
Atu2421 +0.3 1.4 chitooligosaccharide deacetylase compare
Atu6114 +0.3 1.1 hypothetical protein compare
Atu8094 +0.3 1.2 hypothetical protein compare
Atu0849 +0.3 2.0 hypothetical protein compare
Atu0734 +0.3 1.2 hypothetical protein compare
Atu4292 +0.3 1.8 chloramphenicol resistance protein compare
Atu1102 +0.3 1.6 hypothetical protein compare
Atu3588 +0.3 1.2 DNA-3-methyladenine glycosidase II compare


Specific Phenotypes

None in this experiment

For Agrobacterium fabrum C58 in lb_benthi_root experiments

For lb_benthi_root LB_Benthi_root across organisms