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Experiment set18IT057 for
Pseudomonas simiae WCS417
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Parafilmed volatile agar plate with no fungus
200 most important genes:
gene
name
fitness
t score
description
PS417
_02225
-4.6
-2.2
bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase
compare
PS417
_24705
-4.4
-2.7
D-alanyl-D-alanine carboxypeptidase
compare
PS417
_22570
-4.0
-1.0
H-NS histone
compare
PS417
_27300
-3.9
-1.0
cell division protein ZapA
compare
PS417
_26850
-3.9
-1.0
twin-arginine translocation pathway signal protein
compare
PS417
_16555
-3.5
-1.8
cupin
compare
PS417
_24500
-3.4
-2.8
DEAD/DEAH box helicase
compare
PS417
_27795
-3.1
-0.8
orotate phosphoribosyltransferase
compare
PS417
_00385
-2.6
-0.9
Fur family transcriptional regulator
compare
PS417
_04290
-2.6
-3.6
hypothetical protein
compare
PS417
_27870
-2.6
-3.4
ATP-dependent DNA helicase RecG
compare
PS417
_01915
-2.3
-0.6
ATP-dependent protease ATP-binding subunit HslU
compare
PS417
_08410
-2.2
-1.9
hypothetical protein
compare
PS417
_03300
-2.2
-2.5
alanine acetyltransferase
compare
PS417
_18310
-2.2
-0.9
hypothetical protein
compare
PS417
_04585
-2.2
-0.9
hypothetical protein
compare
PS417
_19350
-2.2
-4.7
GTP cyclohydrolase
compare
PS417
_26370
-2.1
-3.3
RNA helicase
compare
PS417
_15705
-2.1
-2.0
nitrate reductase
compare
PS417
_22060
-2.1
-1.0
hypothetical protein
compare
PS417
_26240
-2.0
-1.8
N-methylproline demethylase
compare
PS417
_18055
-2.0
-0.9
general secretion pathway protein GspK
compare
PS417
_26990
-2.0
-0.7
RNA pyrophosphohydrolase
compare
PS417
_00975
-2.0
-1.2
hypothetical protein
compare
PS417
_24745
-2.0
-2.6
gamma-glutamyl phosphate reductase
compare
PS417
_27595
-1.9
-1.6
recombinase XerC
compare
PS417
_27005
-1.9
-0.8
membrane protein
compare
PS417
_26175
-1.9
-0.9
sarcosine oxidase subunit gamma
compare
PS417
_01590
-1.9
-1.6
polysaccharide deacetylase
compare
PS417
_17240
-1.8
-1.9
trigger factor
compare
PS417
_02880
-1.8
-0.9
copper chaperone
compare
PS417
_15480
-1.7
-1.8
ABC transporter substrate-binding protein
compare
PS417
_04090
-1.7
-3.1
hypothetical protein
compare
PS417
_08170
-1.7
-6.6
capsular biosynthesis protein
compare
PS417
_24115
-1.7
-1.4
hypothetical protein
compare
PS417
_23545
-1.7
-1.2
gamma-glutamyl kinase
compare
PS417
_03560
-1.7
-1.0
GTP-binding protein
compare
PS417
_11705
-1.7
-4.6
cyclic peptide transporter
compare
PS417
_20880
-1.6
-1.9
GntR family transcriptional regulator
compare
PS417
_06680
-1.6
-5.3
nuclease PIN
compare
PS417
_04960
-1.6
-1.1
hypothetical protein
compare
PS417
_13510
-1.6
-0.8
polyketide cyclase
compare
PS417
_22565
-1.6
-0.5
formyltetrahydrofolate deformylase
compare
PS417
_06370
-1.5
-1.0
cold-shock protein
compare
PS417
_11320
-1.5
-1.3
hypothetical protein
compare
PS417
_13055
-1.5
-1.6
aminotransferase
compare
PS417
_19955
-1.5
-1.3
hypothetical protein
compare
PS417
_21850
-1.5
-0.9
LysR family transcriptional regulator
compare
PS417
_05865
-1.5
-1.1
hypothetical protein
compare
PS417
_16490
-1.5
-1.0
cell division protein FtsK
compare
PS417
_00085
-1.5
-1.7
16S rRNA methyltransferase
compare
PS417
_15770
-1.5
-0.9
pyridoxine 5'-phosphate oxidase
compare
PS417
_27245
-1.5
-2.7
aminotransferase DegT
compare
PS417
_09200
-1.4
-2.4
ABC transporter
compare
PS417
_08670
-1.4
-2.2
molybdopterin biosynthesis protein B
compare
PS417
_21430
-1.4
-1.3
3-oxoacyl-ACP synthase
compare
PS417
_15135
-1.4
-1.1
hypothetical protein
compare
PS417
_02885
-1.4
-1.6
hypothetical protein
compare
PS417
_11430
-1.4
-4.4
EamA
compare
PS417
_27195
-1.4
-1.0
N-acetylglutamate synthase
compare
PS417
_24605
-1.4
-1.9
thiamine-phosphate pyrophosphorylase
compare
PS417
_21380
-1.4
-3.1
GntR family transcriptional regulator
compare
PS417
_13010
-1.4
-1.6
alpha/beta hydrolase
compare
PS417
_10145
-1.4
-1.2
hypothetical protein
compare
PS417
_10480
-1.4
-1.6
glutathione S-transferase
compare
PS417
_00180
-1.4
-1.7
tryptophan synthase subunit alpha
compare
PS417
_06150
-1.4
-2.0
SAM-dependent methlyltransferase
compare
PS417
_05200
-1.3
-2.3
DNA recombination protein RecO
compare
PS417
_24525
-1.3
-1.7
nuclease
compare
PS417
_20855
-1.3
-0.7
hypothetical protein
compare
PS417
_04380
-1.3
-0.6
ABC transporter permease
compare
PS417
_06685
-1.3
-0.6
beta-ketoadipyl CoA thiolase
compare
PS417
_07170
-1.3
-1.7
hypothetical protein
compare
PS417
_00045
-1.3
-1.0
glycerol acyltransferase
compare
PS417
_26685
-1.3
-1.5
hypothetical protein
compare
PS417
_04875
-1.3
-1.0
molybdenum cofactor biosynthesis protein MoaE
compare
PS417
_22315
-1.3
-1.8
DNA-3-methyladenine glycosylase
compare
PS417
_02575
-1.3
-2.4
membrane protein
compare
PS417
_07620
-1.3
-1.3
beta-hexosaminidase
compare
PS417
_09470
-1.3
-0.8
hypothetical protein
compare
PS417
_24395
-1.3
-3.3
hemolysin D
compare
PS417
_24135
-1.3
-1.3
hypothetical protein
compare
PS417
_19505
-1.3
-1.2
2,4-diaminobutyrate 4-aminotransferase
compare
PS417
_07165
-1.2
-4.1
dihydrodipicolinate synthase
compare
PS417
_19610
-1.2
-1.3
molybdenum cofactor sulfurase
compare
PS417
_17070
-1.2
-1.6
RNA polymerase subunit sigma-24
compare
PS417
_09545
-1.2
-1.6
aldehyde-activating protein
compare
PS417
_16560
-1.2
-1.5
GNAT family acetyltransferase
compare
PS417
_04865
-1.2
-2.1
molybdenum cofactor biosynthesis protein MoaC
compare
PS417
_06865
-1.2
-1.6
transporter
compare
PS417
_17835
-1.2
-1.9
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase
compare
PS417
_24765
-1.2
-2.2
membrane protein
compare
PS417
_05695
-1.2
-3.2
transcriptional regulator
compare
PS417
_15590
-1.2
-2.8
hypothetical protein
compare
PS417
_09210
-1.1
-0.8
TetR family transcriptional regulator
compare
PS417
_20025
-1.1
-0.9
alpha-ribazole phosphatase
compare
PS417
_08230
-1.1
-1.1
lipopolysaccharide biosynthesis protein RfbH
compare
PS417
_18025
-1.1
-1.7
cytochrome C
compare
PS417
_04500
-1.1
-0.9
hypothetical protein
compare
PS417
_02055
-1.1
-1.9
methyltransferase
compare
PS417
_02925
-1.1
-2.7
membrane protein
compare
PS417
_19790
-1.1
-2.1
ATP synthase
compare
PS417
_16855
-1.1
-1.0
cation:proton antiporter
compare
PS417
_11420
-1.1
-1.9
potassium transporter KefB
compare
PS417
_17565
-1.1
-1.7
branched-chain amino acid aminotransferase
compare
PS417
_27180
-1.1
-1.3
peroxidase
compare
PS417
_13620
-1.1
-0.7
thermostable hemolysin
compare
PS417
_03260
-1.1
-0.8
5S ribosomal RNA
compare
PS417
_18235
-1.1
-1.6
nitrile hydratase
compare
PS417
_27425
-1.1
-4.5
exopolyphosphatase
compare
PS417
_04595
-1.1
-1.1
cell division protein MraZ
compare
PS417
_22875
-1.1
-1.0
hypothetical protein
compare
PS417
_05160
-1.1
-0.6
DNA polymerase III subunit chi
compare
PS417
_13255
-1.1
-1.3
ABC transporter
compare
PS417
_10405
-1.1
-0.7
filamentous hemagglutinin
compare
PS417
_22795
-1.1
-0.9
exclusion suppressor FxsA
compare
PS417
_01875
-1.1
-1.2
polyhydroxyalkanoic acid system protein
compare
PS417
_15400
-1.0
-0.9
hypothetical protein
compare
PS417
_05815
-1.0
-2.3
recombinase RecA
compare
PS417
_24560
-1.0
-3.1
ferrous iron transporter
compare
PS417
_26585
-1.0
-2.3
malonate carrier protein
compare
PS417
_08295
-1.0
-1.9
ATPase
compare
PS417
_20090
-1.0
-5.8
DegT/DnrJ/EryC1/StrS aminotransferase
compare
PS417
_14400
-1.0
-1.3
hypothetical protein
compare
PS417
_09035
-1.0
-1.8
hypothetical protein
compare
PS417
_04180
-1.0
-1.9
GntR family transcriptional regulator
compare
PS417
_05470
-1.0
-2.1
DSBA oxidoreductase
compare
PS417
_08045
-1.0
-1.2
uracil permease
compare
PS417
_05535
-1.0
-1.0
Fis family transcriptional regulator
compare
PS417
_21705
-1.0
-2.9
arginine N-succinyltransferase
compare
PS417
_16005
-1.0
-2.0
ATPase
compare
PS417
_15285
-1.0
-0.6
type VI secretion protein
compare
PS417
_04440
-1.0
-1.2
hypoxanthine-guanine phosphoribosyltransferase
compare
PS417
_26340
-1.0
-3.2
betaine-aldehyde dehydrogenase
compare
PS417
_12325
-1.0
-2.1
precorrin-4 C11-methyltransferase
compare
PS417
_08135
-1.0
-2.0
3-phosphoshikimate 1-carboxyvinyltransferase
compare
PS417
_02560
-1.0
-1.1
23S rRNA methyltransferase
compare
PS417
_24575
-1.0
-0.7
hypothetical protein
compare
PS417
_21480
-1.0
-0.8
23S rRNA pseudouridylate synthase
compare
PS417
_11435
-1.0
-3.9
asparagine synthase
compare
PS417
_17650
-1.0
-1.4
proteinase
compare
PS417
_10425
-1.0
-0.9
hypothetical protein
compare
PS417
_23170
-1.0
-1.1
FeS assembly protein IscX
compare
PS417
_22945
-1.0
-1.1
phosphoribosylglycinamide formyltransferase
compare
PS417
_11375
-1.0
-1.3
hypothetical protein
compare
PS417
_01360
-1.0
-1.1
4-oxalocrotonate tautomerase
compare
PS417
_23805
-0.9
-2.4
acetolactate synthase 3 regulatory subunit
compare
PS417
_21125
-0.9
-2.9
phosphoadenosine phosphosulfate reductase
compare
PS417
_25705
-0.9
-1.4
lipoate--protein ligase
compare
PS417
_11025
-0.9
-2.7
sugar ABC transporter substrate-binding protein
compare
PS417
_26420
-0.9
-0.7
hypothetical protein
compare
PS417
_11175
-0.9
-1.1
AraC family transcriptional regulator
compare
PS417
_02555
-0.9
-6.2
exoribonuclease R
compare
PS417
_01305
-0.9
-1.9
Fis family transcriptional regulator
compare
PS417
_19010
-0.9
-3.8
LysR family transcriptional regulator
compare
PS417
_24460
-0.9
-0.8
hypothetical protein
compare
PS417
_08125
-0.9
-0.3
prephenate dehydratase
compare
PS417
_28050
-0.9
-1.5
hypothetical protein
compare
PS417
_04300
-0.9
-1.6
FagA protein
compare
PS417
_27800
-0.9
-0.6
exodeoxyribonuclease III
compare
PS417
_09445
-0.9
-1.7
antibiotic biosynthesis monooxygenase
compare
PS417
_25645
-0.9
-2.8
peptidase M23
compare
PS417
_03340
-0.9
-1.0
gluconate transporter
compare
PS417
_04295
-0.9
-3.7
peptidase PmbA
compare
PS417
_16995
-0.9
-2.4
LysR family transcriptional regulator
compare
PS417
_12540
-0.9
-1.3
hypothetical protein
compare
PS417
_26730
-0.9
-0.3
pyrroline-5-carboxylate reductase
compare
PS417
_26215
-0.9
-2.7
ferredoxin
compare
PS417
_19430
-0.9
-1.1
ureidoglycolate hydrolase
compare
PS417
_26190
-0.9
-3.1
sarcosine oxidase subunit beta
compare
PS417
_12455
-0.9
-1.2
hydrolase
compare
PS417
_07595
-0.9
-1.5
PasA protein
compare
PS417
_23615
-0.9
-1.5
sulfate transporter
compare
PS417
_27155
-0.9
-0.7
aliphatic sulfonates transport ATP-binding subunit
compare
PS417
_15470
-0.9
-2.2
saccharopine dehydrogenase
compare
PS417
_13800
-0.9
-0.9
4-deoxy-4-formamido-L-arabinose-phospho-UDP deformylase
compare
PS417
_23490
-0.9
-0.7
dihydrofolate reductase
compare
PS417
_16535
-0.9
-1.4
NUDIX hydrolase
compare
PS417
_08665
-0.9
-2.2
molybdopterin-guanine dinucleotide biosynthesis protein A
compare
PS417
_18165
-0.9
-1.3
membrane protein
compare
PS417
_13300
-0.9
-1.7
short-chain dehydrogenase
compare
PS417
_21760
-0.9
-0.9
hypothetical protein
compare
PS417
_12750
-0.9
-2.8
acriflavine resistance protein B
compare
PS417
_04715
-0.9
-2.2
Fe-S oxidoreductase
compare
PS417
_25390
-0.9
-2.2
MFS transporter
compare
PS417
_21270
-0.9
-0.9
translation initiation factor 2
compare
PS417
_20985
-0.9
-0.5
porin
compare
PS417
_05100
-0.9
-0.8
RNA polymerase sigma factor
compare
PS417
_19490
-0.9
-2.0
mechanosensitive ion channel protein
compare
PS417
_10050
-0.8
-1.3
hypothetical protein
compare
PS417
_04530
-0.8
-1.3
glycerate dehydrogenase
compare
PS417
_23825
-0.8
-2.6
penicillin-binding protein
compare
PS417
_26635
-0.8
-2.3
hypothetical protein
compare
PS417
_27110
-0.8
-2.2
spermidine/putrescine ABC transporter permease
compare
PS417
_10955
-0.8
-2.3
porin
compare
PS417
_26645
-0.8
-0.9
chemotaxis protein
compare
PS417
_16870
-0.8
-1.4
short-chain dehydrogenase
compare
PS417
_27510
-0.8
-2.4
disulfide bond formation protein B
compare
PS417
_28020
-0.8
-1.8
chorismate--pyruvate lyase
compare
PS417
_19695
-0.8
-4.0
flagellar biosynthesis sigma factor
compare
Specific Phenotypes
For 2 genes in this experiment