Experiment set18IT051 for Pseudomonas putida KT2440

Compare to:

Growth at 34C

200 most important genes:

  gene name fitness t score description  
PP_0293 -6.8 -4.0 Imidazole glycerol phosphate synthase subunit HisF compare
PP_0082 -6.2 -4.3 tryptophan synthase alpha chain compare
PP_0292 -6.0 -5.9 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
PP_1985 -5.5 -7.2 3-isopropylmalate dehydratase large subunit compare
PP_0967 -5.5 -12.2 histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) compare
PP_0083 -5.4 -7.4 tryptophan synthase beta chain compare
PP_4696 -5.2 -3.6 Nitrogen regulation protein NR(I) compare
PP_0289 -5.0 -9.5 Imidazoleglycerol-phosphate dehydratase compare
PP_0184 -4.9 -9.3 Argininosuccinate lyase compare
PP_1995 -4.7 -9.7 N-(5'-phosphoribosyl)anthranilate isomerase compare
PP_5098 -4.6 -9.6 methionine biosynthesis protein MetW compare
PP_4909 -4.6 -8.2 phosphoserine phosphatase compare
PP_5289 -4.4 -4.8 Acetylglutamate kinase compare
PP_5348 -4.3 -8.3 Transcriptional regulator, LysR family compare
PP_1025 -4.3 -13.7 2-isopropylmalate synthase compare
PP_0966 -4.2 -9.4 Histidinol dehydrogenase compare
PP_1988 -4.2 -8.4 3-isopropylmalate dehydrogenase compare
PP_5185 -4.1 -7.2 acetylglutamate kinase-like protein (regulatory domain)/amino acid N-acetyltransferase compare
PP_3511 -4.1 -8.6 Branched-chain-amino-acid aminotransferase compare
PP_4678 -4.0 -12.9 Ketol-acid reductoisomerase compare
PP_5347 -4.0 -10.6 pyruvate carboxylase subunit A compare
PP_4902 -3.9 -3.8 Oligoribonuclease compare
PP_1022 -3.8 -6.4 glucose 6-phosphate-1-dehydrogenase compare
PP_5346 -3.8 -6.9 pyruvate carboxylase subunit B compare
PP_0965 -3.8 -10.2 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
PP_4680 -3.7 -13.4 acetohydroxybutanoate synthase / acetolactate synthase compare
PP_3999 -3.7 -10.0 Uroporphyrinogen-III C-methyltransferase/Precorrin-2 dehydrogenase/Sirohydrochlorin ferrochelatase compare
PP_4804 -3.7 -5.0 RlpA-like lipoprotein compare
PP_5097 -3.6 -10.8 homoserine O-acetyltransferase compare
PP_0290 -3.6 -5.4 Imidazole glycerol phosphate synthase subunit HisH compare
PP_1079 -3.5 -5.3 Ornithine carbamoyltransferase compare
PP_1088 -3.5 -11.6 Argininosuccinate synthase compare
PP_5155 -3.4 -4.1 D-3-phosphoglycerate dehydrogenase / alpha-ketoglutarate reductase compare
PP_1654 -3.2 -4.3 cysteine synthase B compare
PP_5128 -3.1 -6.7 Dihydroxy-acid dehydratase compare
PP_4679 -3.1 -6.6 acetohydroxybutanoate synthase / acetolactate synthase compare
PP_5014 -3.1 -4.0 Phosphoribosyl-AMP cyclohydrolase compare
PP_0417 -3.0 -12.7 Anthranilate synthase component 1 compare
PP_2328 -3.0 -6.2 Phosphoadenosine phosphosulfate reductase compare
PP_0422 -3.0 -5.8 Indole-3-glycerol phosphate synthase compare
PP_1362 -2.9 -4.8 pyruvate kinase II compare
PP_2371 -2.9 -5.6 Sulphite reductase hemoprotein, beta subunit compare
PP_0421 -2.9 -6.8 Anthranilate phosphoribosyltransferase compare
PP_3378 -2.9 -3.7 putative 2-ketogluconokinase compare
PP_2001 -2.9 -7.0 O-succinylhomoserine sulfhydrylase compare
PP_3417 -2.9 -5.2 D-gluconate transporter compare
PP_5015 -2.9 -3.3 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
PP_4785 -2.8 -6.2 conserved exported protein of unknown function compare
PP_4700 -2.8 -1.9 pantothenate synthetase compare
PP_0364 -2.7 -7.7 pimeloyl-[acp] methyl ester esterase compare
PP_5217 -2.7 -10.3 Polyphosphate kinase compare
PP_2327 -2.7 -5.2 transcriptional dual regulator / CysB-O-acetyl-L-serine compare
PP_4890 -2.7 -4.9 ATP phosphoribosyltransferase regulatory subunit compare
PP_1734 -2.4 -5.2 Probable septum site-determining protein MinC compare
PP_1231 -2.4 -6.0 quinolinate synthase [4Fe-4S] cluster subunit compare
PP_4977 -2.4 -9.2 5,10-methylenetetrahydrofolate reductase compare
PP_4943 -2.4 -1.9 putative Glycosyl transferase compare
PP_1664 -2.3 -3.5 phosphoribosylglycinamide formyltransferase 1 compare
PP_4984 -2.2 -7.9 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase compare
PP_2168 -2.2 -7.2 Transaldolase compare
PP_1986 -2.2 -2.7 3-isopropylmalate dehydratase small subunit compare
PP_4964 -2.2 -4.0 D-erythrose 4-phosphate dehydrogenase compare
PP_1428 -2.1 -2.1 Sigma factor AlgU negative regulatory protein compare
PP_2378 -2.1 -3.3 Fe/S biogenesis protein NfuA compare
PP_0420 -2.1 -5.6 aminodeoxychorismate synthase / para-aminobenzoate synthase multi-enzyme complex compare
PP_0362 -2.1 -8.5 Biotin synthase compare
PP_2402 -2.1 -2.3 putative Sensor histidine kinase compare
PP_1677 -2.0 -5.2 Adenosyl-cobyric acid synthase compare
PP_5303 -2.0 -4.3 aminoacrylate/iminopropionate hydrolase/deaminase compare
PP_4829 -2.0 -4.3 putative precorrin-3B synthase compare
PP_0787 -2.0 -5.1 quinolinate phosphoribosyltransferase (decarboxylating) monomer compare
PP_2375 -2.0 -10.8 cobalamin-dependent methionine synthase compare
PP_3649 -1.9 -4.2 Transcriptional regulator, GntR family compare
PP_0833 -1.9 -1.3 queuine tRNA-ribosyltransferase compare
PP_0366 -1.9 -5.1 dethiobiotin synthetase compare
PP_5093 -1.9 -2.0 twitching motility protein compare
PP_1898 -1.9 -4.0 MotA/TolQ/ExbB proton channel family protein compare
PP_0291 -1.8 -1.7 conserved protein of unknown function compare
PP_0363 -1.8 -7.6 8-amino-7-oxononanoate synthase compare
PP_2903 -1.7 -3.2 peptidyl-prolyl cis-trans isomerase B (rotamase B) compare
PP_1912 -1.7 -4.4 Phosphate acyltransferase compare
PP_4830 -1.7 -5.7 precorrin-6Y C(5,15)-methyltransferase compare
PP_1679 -1.7 -2.5 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase compare
PP_3508 -1.6 -3.1 Protein CobW compare
PP_2145 -1.6 -3.6 beta-N-acetylglucosaminidase compare
PP_5007 -1.6 -2.5 Polyhydroxyalkanoate granule-associated protein GA2 compare
PP_t29 -1.6 -2.0 tRNA-Ala compare
PP_1675 -1.5 -5.3 Subunit of adenosylcobinamide-phosphate synthase beta component compare
PP_3505 -1.5 -1.7 conserved protein of unknown function compare
PP_0630 -1.5 -1.4 DNA gyrase inhibitor YacG compare
PP_0365 -1.5 -5.4 Malonyl-[acyl-carrier protein] O-methyltransferase compare
PP_1426 -1.5 -8.4 L-aspartate oxidase compare
PP_4832 -1.5 -3.3 Precorrin-6x reductase compare
PP_3507 -1.4 -7.2 Aerobic cobaltochelatase subunit CobN compare
PP_2370 -1.4 -2.0 conserved protein of unknown function compare
PP_4826 -1.4 -5.2 Precorrin-3B C17-methyltransferase compare
PP_1672 -1.4 -4.3 cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase compare
PP_1673 -1.4 -3.5 cobyrinate a,c-diamide synthase compare
PP_4018 -1.4 -2.9 Acetyltransferase, GNAT family compare
PP_4693 -1.4 -3.6 RNA polymerase-binding transcription factor DksA compare
PP_1681 -1.4 -6.7 cobalamin 5'-phosphate synthase / Cobalamin synthase compare
PP_5104 -1.4 -6.2 thiazole synthase compare
PP_4994 -1.3 -4.7 conserved protein of unknown function compare
PP_5508 -1.3 -1.5 conserved protein of unknown function compare
PP_1656 -1.3 -4.2 ATP:GTP 3'-pyrophosphotransferase compare
PP_4480 -1.3 -5.5 arginine N-succinyltransferase, subunit alpha compare
PP_4827 -1.3 -6.2 Precorrin-2 C(20)-methyltransferase compare
PP_1217 -1.3 -2.8 Holliday junction ATP-dependent DNA helicase RuvB compare
PP_5054 -1.3 -1.9 glutaredoxin 3 compare
PP_0888 -1.2 -2.5 Photosynthetic apparatus regulatory protein RegA compare
PP_4895 -1.2 -2.3 tRNA dimethylallyltransferase compare
PP_3938 -1.2 -1.7 conserved protein of unknown function compare
PP_3506 -1.2 -3.1 Magnesium chelatase, subunit ChII compare
PP_5533 -1.2 -1.7 conserved protein of unknown function compare
PP_3241 -1.2 -1.5 conserved exported protein of unknown function compare
PP_4695 -1.2 -5.6 Sensory box histidine kinase compare
PP_1304 -1.2 -6.2 sulfate adenylyltransferase subunit 1/adenylyl-sulfate kinase compare
PP_3880 -1.2 -1.6 conserved exported protein of unknown function compare
PP_4988 -1.2 -4.6 signal transduction histidine kinase CheA/CheY-like receiver compare
PP_2307 -1.2 -1.2 conserved protein of unknown function compare
PP_0393 -1.2 -1.8 putative 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase compare
PP_3821 -1.1 -6.2 UTP-glucose-1-phosphate uridylyltransferase compare
PP_0001 -1.1 -1.1 probable chromosome-partitioning protein compare
PP_1655 -1.1 -2.0 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD compare
PP_3098 -1.1 -1.2 conserved protein of unknown function compare
PP_5203 -1.1 -4.9 5-formyltetrahydrofolate cyclo-ligase compare
PP_2226 -1.1 -3.4 putative K(+)/H(+) antiporter subunit F compare
PP_0959 -1.1 -1.9 phospholipid ABC transporter compare
PP_4120 -1.1 -2.3 NADH-quinone oxidoreductase subunit B compare
PP_2862 -1.1 -4.4 Undecaprenyl-diphosphatase compare
PP_4546 -1.1 -2.6 ATP-dependent helicase HrpA compare
PP_1303 -1.1 -3.8 Sulfate adenylyltransferase subunit 2 compare
PP_1733 -1.1 -2.1 membrane ATPase of the MinC-MinD-MinE system compare
PP_0339 -1.1 -0.7 Pyruvate dehydrogenase E1 component compare
PP_0022 -1.0 -1.1 hypothetical protein compare
PP_5453 -1.0 -1.3 conserved protein of unknown function compare
PP_1678 -1.0 -2.5 bifunctional cobinamide-P guanylyltransferase - adenosylcobinamide kinase compare
PP_5027 -1.0 -1.4 D-tyrosyl-tRNA(Tyr) deacylase compare
PP_1778 -1.0 -4.5 Lipopolysaccharide ABC export system, permease protein compare
PP_4129 -1.0 -2.5 NADH:ubiquinone oxidoreductase, membrane subunit L compare
PP_1011 -1.0 -5.1 glucokinase compare
PP_3064 -1.0 -1.7 Phage tail protein compare
PP_5090 -1.0 -2.1 putative cell division protein compare
PP_5095 -1.0 -0.8 pyrroline-5-carboxylate reductase compare
PP_2107 -1.0 -1.0 conserved protein of unknown function compare
PP_0434 -1.0 -2.8 Anhydro-N-acetylmuramic acid kinase compare
PP_3411 -1.0 -1.1 conserved protein of unknown function compare
PP_1676 -1.0 -3.2 subunit of adenosylcobinamide-phosphate synthase beta component compare
PP_3105 -1.0 -2.6 conserved membrane protein of unknown function compare
PP_4724 -1.0 -0.7 Carbamoyl-phosphate synthase small chain compare
PP_5519 -1.0 -1.8 conserved protein of unknown function of phage origin compare
PP_1237 -1.0 -1.3 4-hydroxy-tetrahydrodipicolinate synthase compare
PP_0735 -1.0 -1.7 molybdopterin-synthase adenylyltransferase compare
PP_t13 -1.0 -2.1 tRNA-Lys compare
PP_4591 -1.0 -2.5 Ribonuclease D compare
PP_0065 -1.0 -1.9 NAD-binding component of TrK potassium transporter compare
PP_5202 -1.0 -2.7 putative cell division protein compare
PP_0547 -1.0 -4.5 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase compare
PP_0152 -1.0 -1.0 conserved exported protein of unknown function compare
PP_4131 -1.0 -3.6 NADH-quinone oxidoreductase subunit N compare
PP_2336 -1.0 -2.2 aconitate hydratase 1 compare
PP_1355 -1.0 -4.6 Muropeptide permease AmpG compare
PP_4936 -0.9 -4.4 O-antigen polymerase compare
PP_5039 -0.9 -3.3 conserved protein of unknown function compare
PP_0627 -0.9 -1.8 conserved protein of unknown function compare
PP_4066 -0.9 -2.7 methylglutaconyl-CoA hydratase compare
PP_4058 -0.9 -4.5 1,4-alpha-glucan branching enzyme compare
PP_4099 -0.9 -9.0 two-componenent system BarA/UvrY - regulatory subunit compare
PP_0273 -0.9 -1.6 conserved protein of unknown function compare
PP_1099 -0.9 -2.0 Cold shock protein CapB compare
PP_4265 -0.9 -0.6 DNA-binding transcriptional dual regulator compare
PP_1009 -0.9 -2.3 glyceraldehyde-3-phosphate dehydrogenase compare
PP_0673 -0.9 -1.2 conserved protein of unknown function compare
PP_0194 -0.9 -3.0 Transcriptional regulatory protein AlgP compare
PP_1650 -0.8 -7.6 Sensor protein GacS compare
PP_0254 -0.8 -1.9 conserved protein of unknown function compare
PP_2539 -0.8 -2.9 Transcriptional regulator, LysR family compare
PP_0138 -0.8 -5.3 conserved membrane protein of unknown function compare
PP_0405 -0.8 -4.0 conserved protein of unknown function compare
PP_2088 -0.8 -1.9 RNA polymerase sigma factor SigX compare
PP_2899 -0.8 -1.3 conserved exported protein of unknown function compare
PP_1779 -0.8 -3.1 Lipopolysaccharide ABC export system, ATP-binding protein compare
PP_5639 -0.8 -3.4 conserved exported protein of unknown function compare
PP_1825 -0.8 -2.0 conserved exported protein of unknown function compare
PP_2044 -0.8 -1.2 conserved inner membrane protein of unknown function compare
PP_3672 -0.8 -2.5 conserved protein of unknown function compare
PP_2510 -0.8 -1.3 conserved protein of unknown function compare
PP_2373 -0.8 -1.6 conserved protein of unknown function compare
PP_4392 -0.8 -3.3 chemotaxis protein methyltransferase compare
PP_2693 -0.8 -2.4 putative Dipeptidase compare
PP_1872 -0.8 -4.2 glutamate-pyruvate aminotransferase compare
PP_4828 -0.8 -0.6 Precorrin-8X methylmutase compare
PP_5114 -0.8 -1.6 putative adenine methyltransferase compare
PP_2217 -0.8 -1.8 enoyl-CoA hydratase compare
PP_4004 -0.8 -2.1 DNA translocase FtsK compare
PP_4684 -0.8 -3.6 conserved protein of unknown function with kinase-like domain compare
PP_3376 -0.8 -2.8 putative phosphonate dehydrogenase compare
PP_2900 -0.8 -1.2 conserved protein of unknown function compare
PP_1764 -0.8 -1.9 Phosphoglycolate phosphatase 2 compare
PP_t57 -0.8 -3.2 tRNA-Arg compare


Specific Phenotypes

None in this experiment

For Pseudomonas putida KT2440 in temperature experiments

For temperature D-Glucose across organisms