Experiment set18IT050 for Pseudomonas putida KT2440

Compare to:

Growth at 34C

200 most important genes:

  gene name fitness t score description  
PP_0293 -6.8 -3.9 Imidazole glycerol phosphate synthase subunit HisF compare
PP_0292 -6.0 -5.9 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
PP_1988 -5.2 -10.2 3-isopropylmalate dehydrogenase compare
PP_0967 -5.0 -10.4 histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) compare
PP_5185 -4.7 -9.0 acetylglutamate kinase-like protein (regulatory domain)/amino acid N-acetyltransferase compare
PP_0083 -4.7 -8.2 tryptophan synthase beta chain compare
PP_4902 -4.5 -3.1 Oligoribonuclease compare
PP_5346 -4.4 -9.0 pyruvate carboxylase subunit B compare
PP_0966 -4.3 -11.4 Histidinol dehydrogenase compare
PP_0082 -4.2 -8.1 tryptophan synthase alpha chain compare
PP_1025 -4.2 -11.7 2-isopropylmalate synthase compare
PP_1022 -4.1 -4.9 glucose 6-phosphate-1-dehydrogenase compare
PP_4696 -4.1 -7.4 Nitrogen regulation protein NR(I) compare
PP_0289 -4.1 -7.0 Imidazoleglycerol-phosphate dehydratase compare
PP_5155 -4.0 -5.5 D-3-phosphoglycerate dehydrogenase / alpha-ketoglutarate reductase compare
PP_4909 -3.9 -8.6 phosphoserine phosphatase compare
PP_1079 -3.9 -5.8 Ornithine carbamoyltransferase compare
PP_5347 -3.9 -10.9 pyruvate carboxylase subunit A compare
PP_4678 -3.8 -12.6 Ketol-acid reductoisomerase compare
PP_2371 -3.8 -7.4 Sulphite reductase hemoprotein, beta subunit compare
PP_0184 -3.8 -6.8 Argininosuccinate lyase compare
PP_5348 -3.7 -7.7 Transcriptional regulator, LysR family compare
PP_5303 -3.6 -6.0 aminoacrylate/iminopropionate hydrolase/deaminase compare
PP_1985 -3.6 -4.5 3-isopropylmalate dehydratase large subunit compare
PP_4679 -3.6 -5.4 acetohydroxybutanoate synthase / acetolactate synthase compare
PP_1088 -3.5 -11.1 Argininosuccinate synthase compare
PP_1995 -3.5 -6.8 N-(5'-phosphoribosyl)anthranilate isomerase compare
PP_3999 -3.5 -9.8 Uroporphyrinogen-III C-methyltransferase/Precorrin-2 dehydrogenase/Sirohydrochlorin ferrochelatase compare
PP_1986 -3.5 -4.0 3-isopropylmalate dehydratase small subunit compare
PP_5128 -3.4 -8.0 Dihydroxy-acid dehydratase compare
PP_3511 -3.4 -7.4 Branched-chain-amino-acid aminotransferase compare
PP_0735 -3.3 -2.6 molybdopterin-synthase adenylyltransferase compare
PP_4874 -3.3 -2.2 50S ribosomal protein L9 compare
PP_0965 -3.3 -8.3 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
PP_5289 -3.3 -4.2 Acetylglutamate kinase compare
PP_4804 -3.2 -4.9 RlpA-like lipoprotein compare
PP_4680 -3.2 -9.9 acetohydroxybutanoate synthase / acetolactate synthase compare
PP_5098 -3.1 -7.2 methionine biosynthesis protein MetW compare
PP_0290 -3.1 -5.8 Imidazole glycerol phosphate synthase subunit HisH compare
PP_0787 -3.1 -6.4 quinolinate phosphoribosyltransferase (decarboxylating) monomer compare
PP_0422 -3.1 -5.1 Indole-3-glycerol phosphate synthase compare
PP_4829 -3.0 -3.6 putative precorrin-3B synthase compare
PP_0417 -2.9 -12.8 Anthranilate synthase component 1 compare
PP_2370 -2.9 -2.9 conserved protein of unknown function compare
PP_0291 -2.8 -3.1 conserved protein of unknown function compare
PP_3505 -2.8 -3.0 conserved protein of unknown function compare
PP_5097 -2.8 -10.3 homoserine O-acetyltransferase compare
PP_0406 -2.8 -3.8 Nucleotidyltransferase family protein compare
PP_2168 -2.8 -7.9 Transaldolase compare
PP_4700 -2.7 -1.9 pantothenate synthetase compare
PP_2328 -2.7 -5.9 Phosphoadenosine phosphosulfate reductase compare
PP_5095 -2.7 -1.8 pyrroline-5-carboxylate reductase compare
PP_2001 -2.5 -8.3 O-succinylhomoserine sulfhydrylase compare
PP_0421 -2.5 -5.5 Anthranilate phosphoribosyltransferase compare
PP_5217 -2.5 -9.1 Polyphosphate kinase compare
PP_2402 -2.4 -3.3 putative Sensor histidine kinase compare
PP_1231 -2.4 -5.6 quinolinate synthase [4Fe-4S] cluster subunit compare
PP_4994 -2.3 -4.3 conserved protein of unknown function compare
PP_4785 -2.3 -4.1 conserved exported protein of unknown function compare
PP_2378 -2.3 -4.0 Fe/S biogenesis protein NfuA compare
PP_4895 -2.3 -1.6 tRNA dimethylallyltransferase compare
PP_1362 -2.3 -3.7 pyruvate kinase II compare
PP_4890 -2.2 -4.5 ATP phosphoribosyltransferase regulatory subunit compare
PP_0393 -2.2 -1.5 putative 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase compare
PP_0362 -2.2 -8.5 Biotin synthase compare
PP_1898 -2.2 -3.4 MotA/TolQ/ExbB proton channel family protein compare
PP_4830 -2.2 -3.5 precorrin-6Y C(5,15)-methyltransferase compare
PP_4826 -2.1 -6.5 Precorrin-3B C17-methyltransferase compare
PP_4977 -2.1 -8.1 5,10-methylenetetrahydrofolate reductase compare
PP_1672 -2.1 -4.9 cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase compare
PP_0365 -2.1 -7.7 Malonyl-[acyl-carrier protein] O-methyltransferase compare
PP_2327 -2.1 -4.8 transcriptional dual regulator / CysB-O-acetyl-L-serine compare
PP_1664 -2.1 -3.5 phosphoribosylglycinamide formyltransferase 1 compare
PP_4828 -2.0 -1.8 Precorrin-8X methylmutase compare
PP_4984 -2.0 -7.6 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase compare
PP_5014 -2.0 -2.8 Phosphoribosyl-AMP cyclohydrolase compare
PP_5027 -1.9 -3.0 D-tyrosyl-tRNA(Tyr) deacylase compare
PP_2720 -1.9 -1.8 conserved protein of unknown function compare
PP_3417 -1.9 -4.4 D-gluconate transporter compare
PP_1994 -1.9 -2.4 tRNA pseudouridine (38-40)synthase compare
PP_2145 -1.9 -2.5 beta-N-acetylglucosaminidase compare
PP_0363 -1.9 -8.8 8-amino-7-oxononanoate synthase compare
PP_1293 -1.9 -2.3 molybdopterin synthase small subunit compare
PP_2375 -1.8 -8.2 cobalamin-dependent methionine synthase compare
PP_1733 -1.8 -3.2 membrane ATPase of the MinC-MinD-MinE system compare
PP_0366 -1.8 -3.3 dethiobiotin synthetase compare
PP_0364 -1.8 -5.6 pimeloyl-[acp] methyl ester esterase compare
PP_0420 -1.8 -5.0 aminodeoxychorismate synthase / para-aminobenzoate synthase multi-enzyme complex compare
PP_1673 -1.7 -4.5 cobyrinate a,c-diamide synthase compare
PP_2337 -1.7 -3.4 aconitate isomerase compare
PP_4943 -1.7 -1.8 putative Glycosyl transferase compare
PP_4301 -1.6 -3.1 Pyruvate kinase compare
PP_1734 -1.6 -2.7 Probable septum site-determining protein MinC compare
PP_2414 -1.6 -3.4 conserved exported protein of unknown function compare
PP_5104 -1.6 -5.3 thiazole synthase compare
PP_1654 -1.6 -2.5 cysteine synthase B compare
PP_1675 -1.5 -7.3 Subunit of adenosylcobinamide-phosphate synthase beta component compare
PP_1656 -1.5 -4.9 ATP:GTP 3'-pyrophosphotransferase compare
PP_3508 -1.5 -1.6 Protein CobW compare
PP_3507 -1.5 -7.7 Aerobic cobaltochelatase subunit CobN compare
PP_1020 -1.5 -1.4 putative glucose-6-phosphate 1-epimerase compare
PP_5015 -1.5 -3.3 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
PP_t12 -1.5 -1.2 tRNA-Thr compare
PP_4827 -1.5 -7.1 Precorrin-2 C(20)-methyltransferase compare
PP_4989 -1.5 -2.3 Protein PilJ compare
PP_3312 -1.4 -1.6 putative Heat shock protein compare
PP_1426 -1.4 -7.8 L-aspartate oxidase compare
PP_1677 -1.4 -3.6 Adenosyl-cobyric acid synthase compare
PP_5248 -1.4 -1.3 putative hydrolase compare
PP_4480 -1.4 -5.9 arginine N-succinyltransferase, subunit alpha compare
PP_1303 -1.4 -3.9 Sulfate adenylyltransferase subunit 2 compare
PP_0653 -1.4 -1.5 conserved protein of unknown function compare
PP_0048 -1.4 -1.4 conserved protein of unknown function compare
PP_t13 -1.3 -2.5 tRNA-Lys compare
PP_2203 -1.3 -2.0 conserved protein of unknown function compare
PP_3241 -1.3 -1.5 conserved exported protein of unknown function compare
PP_0719 -1.3 -1.2 ribosome-associated potassium-dependent informational ATP/GTPase compare
PP_1681 -1.3 -5.7 cobalamin 5'-phosphate synthase / Cobalamin synthase compare
PP_4964 -1.3 -2.5 D-erythrose 4-phosphate dehydrogenase compare
PP_0916 -1.3 -2.1 Amino acid transporter LysE compare
PP_4561 -1.3 -1.1 stress response protein compare
PP_5SB -1.3 -3.8 5S ribosomal RNA compare
PP_4952 -1.3 -1.4 ATP-dependent RNA helicase, specific for 23S rRNA compare
PP_3821 -1.2 -6.2 UTP-glucose-1-phosphate uridylyltransferase compare
PP_4782 -1.2 -2.9 Phosphomethylpyrimidine kinase compare
PP_1676 -1.2 -4.0 subunit of adenosylcobinamide-phosphate synthase beta component compare
PP_1678 -1.2 -1.9 bifunctional cobinamide-P guanylyltransferase - adenosylcobinamide kinase compare
PP_1233 -1.2 -3.4 sulfurtransferase compare
PP_1778 -1.2 -4.1 Lipopolysaccharide ABC export system, permease protein compare
PP_2900 -1.2 -2.8 conserved protein of unknown function compare
PP_1679 -1.2 -3.4 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase compare
PP_0232 -1.2 -1.3 ATP-binding taurine transporter subunit compare
PP_4004 -1.2 -2.9 DNA translocase FtsK compare
PP_1011 -1.2 -6.0 glucokinase compare
PP_0962 -1.2 -2.0 toluene-tolerance protein compare
PP_4268 -1.2 -1.3 nucleoid-associated broad specificity regulator compare
PP_2302 -1.2 -3.1 DNA-binding, ATP-dependent protease compare
PP_1128 -1.2 -3.0 OmpA family protein compare
PP_1041 -1.2 -2.2 twin arginine protein export complex subunit compare
PP_4054 -1.1 -2.3 conserved protein of unknown function compare
PP_1055 -1.1 -1.4 Type II secretion pathway protein GspN compare
PP_0888 -1.1 -1.5 Photosynthetic apparatus regulatory protein RegA compare
PP_1216 -1.1 -2.4 Holliday junction ATP-dependent DNA helicase RuvA compare
PP_4338 -1.1 -4.2 Chemotaxis histidine kinase CheA compare
PP_3808 -1.1 -1.8 Antibiotic synthesis protein MbtH compare
PP_5350 -1.1 -2.0 Transcriptional regulator, RpiR family compare
PP_4792 -1.1 -1.8 conserved exported protein of unknown function compare
PP_4695 -1.1 -5.7 Sensory box histidine kinase compare
PP_5639 -1.1 -4.7 conserved exported protein of unknown function compare
PP_5310 -1.1 -4.2 junction-specific ATP-dependent DNA helicase compare
PP_5508 -1.1 -1.2 conserved protein of unknown function compare
PP_4832 -1.1 -2.2 Precorrin-6x reductase compare
PP_3757 -1.1 -2.0 Chemotaxis protein CheY compare
PP_4936 -1.1 -4.6 O-antigen polymerase compare
PP_2416 -1.0 -1.9 putative Iron ABC transporter, ATP-binding protein compare
PP_0339 -1.0 -0.7 Pyruvate dehydrogenase E1 component compare
PP_4693 -1.0 -2.4 RNA polymerase-binding transcription factor DksA compare
PP_3926 -1.0 -1.3 short-chain dehydrogenase compare
PP_5598 -1.0 -3.2 conserved protein of unknown function compare
PP_1770 -1.0 -1.2 3-phosphoshikimate 1-carboxyvinyltransferase compare
PP_1009 -1.0 -2.9 glyceraldehyde-3-phosphate dehydrogenase compare
PP_3105 -1.0 -1.4 conserved membrane protein of unknown function compare
PP_4560 -1.0 -2.6 putative Ribonuclease BN compare
PP_0949 -1.0 -2.4 putative ATP-binding protein UPF0042 compare
PP_5507 -1.0 -2.2 protein of unknown function compare
PP_0775 -1.0 -1.6 conserved protein of unknown function compare
PP_2511 -1.0 -1.8 conserved protein of unknown function compare
PP_0833 -0.9 -1.1 queuine tRNA-ribosyltransferase compare
PP_t29 -0.9 -1.7 tRNA-Ala compare
PP_0959 -0.9 -1.8 phospholipid ABC transporter compare
PP_4724 -0.9 -0.6 Carbamoyl-phosphate synthase small chain compare
PP_2000 -0.9 -0.6 amidophosphoribosyl transferase compare
PP_0547 -0.9 -3.1 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase compare
PP_4556 -0.9 -2.5 conserved protein of unknown function compare
PP_3206 -0.9 -2.9 conserved protein of unknown function compare
PP_4340 -0.9 -2.7 response regulator for chemotactic signal transduction compare
PP_5028 -0.9 -2.4 proline iminopeptidase compare
PP_5321 -0.9 -5.0 two-component system sensory histidine kinase compare
PP_3506 -0.9 -1.9 Magnesium chelatase, subunit ChII compare
PP_4073 -0.9 -1.4 conserved exported protein of unknown function compare
PP_5203 -0.9 -3.7 5-formyltetrahydrofolate cyclo-ligase compare
PP_1304 -0.9 -4.7 sulfate adenylyltransferase subunit 1/adenylyl-sulfate kinase compare
PP_4099 -0.9 -8.6 two-componenent system BarA/UvrY - regulatory subunit compare
PP_5702 -0.9 -2.7 conserved protein of unknown function compare
PP_4988 -0.9 -3.6 signal transduction histidine kinase CheA/CheY-like receiver compare
PP_4593 -0.9 -1.5 conserved protein of unknown function compare
PP_4265 -0.9 -0.6 DNA-binding transcriptional dual regulator compare
PP_4532 -0.9 -1.1 ATP-dependent DEAD-box RNA helicase require for 50S ribosomal subunit biogenesis compare
PP_3919 -0.9 -2.7 conserved protein of unknown function compare
PP_2060 -0.9 -1.8 DNA-binding transcriptional dual regulator - SoxR-reversible one-electron oxidation of its [2Fe-2S] cluster, NADPH-dependent compare
PP_2429 -0.9 -1.6 putative Membrane protein compare
PP_2878 -0.9 -1.8 conserved protein of unknown function compare
PP_3715 -0.8 -1.7 Muconate cycloisomerase 1 compare
PP_0725 -0.8 -3.1 conserved hypothetical TPR repeat protein compare
PP_0434 -0.8 -2.6 Anhydro-N-acetylmuramic acid kinase compare
PP_1926 -0.8 -2.3 putative phosphotyrosine-protein phosphatase compare
PP_1872 -0.8 -4.1 glutamate-pyruvate aminotransferase compare
PP_0673 -0.8 -1.9 conserved protein of unknown function compare
PP_4413 -0.8 -3.4 conserved protein of unknown function compare
PP_0945 -0.8 -1.7 conserved protein of unknown function compare


Specific Phenotypes

None in this experiment

For Pseudomonas putida KT2440 in temperature experiments

For temperature D-Glucose across organisms