Experiment set18IT050 for Pseudomonas putida KT2440

Compare to:

Growth at 34C

200 most detrimental genes:

  gene name fitness t score description  
PP_5654 +1.2 2.6 putative phosphotriesterase compare
PP_2122 +1.1 3.9 molybdenum cofactor biosynthesis protein B compare
PP_4247 +1.0 2.5 Exonuclease compare
PP_1344 +1.0 2.2 conserved protein of unknown function compare
PP_5580 +1.0 2.5 protein of unknown function compare
PP_3052 +1.0 1.7 conserved protein of unknown function compare
PP_3434 +1.0 2.0 conserved protein of unknown function compare
PP_4199 +0.9 1.6 putative Lipoprotein compare
PP_0168 +0.9 8.5 putative surface adhesion protein compare
PP_2631 +0.9 2.3 putative cellulose biosynthesis, BcsF/YhjT compare
PP_1001 +0.9 1.9 arginine deiminase compare
PP_5582 +0.9 1.6 conserved protein of unknown function compare
PP_4519 +0.9 7.5 Agglutination protein compare
PP_0832 +0.9 2.4 S-adenosylmethionine:tRNA ribosyltransferase-isomerase compare
PP_1605 +0.9 2.5 Ribonuclease HII compare
PP_0236 +0.9 3.2 NAD(P)H-dependent FMN reductase subunit compare
PP_3874 +0.9 2.9 conserved protein of unknown function compare
PP_0166 +0.8 7.2 HlyD family secretion protein compare
PP_3201 +0.8 3.7 BNR domain protein compare
PP_2497 +0.8 2.5 conserved protein of unknown function compare
PP_4102 +0.8 2.2 conserved protein of unknown function compare
PP_5216 +0.8 1.8 exopolyphosphatase compare
PP_4018 +0.8 2.4 Acetyltransferase, GNAT family compare
PP_2568 +0.8 1.3 Ring-cleaving dioxygenase compare
PP_5701 +0.8 2.2 conserved protein of unknown function compare
PP_5093 +0.8 1.2 twitching motility protein compare
PP_4642 +0.8 1.3 Cyclic diguanosine monophosphate-binding protein compare
PP_3307 +0.8 2.0 conserved protein of unknown function compare
PP_0165 +0.7 6.4 GGDEF domain protein compare
PP_0167 +0.7 6.6 Toxin secretion ATP-binding protein compare
PP_4892 +0.7 3.5 integral membrane ATP-dependent zinc metallopeptidase / HflK-HflC complex compare
PP_5327 +0.7 2.2 putative phosphate ABC transporter, permease subunit compare
PP_4262 +0.7 1.5 Cytochrome oxidase maturation protein, cbb3-type compare
PP_1176 +0.7 1.2 conserved protein of unknown function compare
PP_5167 +0.7 1.4 conserved hypothetical protein compare
PP_2330 +0.7 2.6 conserved protein of unknown function compare
PP_2705 +0.7 2.8 conserved protein of unknown function compare
PP_4373 +0.7 6.1 Transcriptional regulator FleQ compare
PP_1218 +0.7 2.7 putative acyl-CoA thioesterase compare
PP_3234 +0.7 1.7 Heat shock protein, HSP20 family compare
PP_0711 +0.7 2.6 putative hydrolase compare
PP_3362 +0.7 2.5 Transcriptional regulator, AsnC family compare
PP_1466 +0.7 2.3 Long-chain acyl-CoA thioester hydrolase family protein compare
PP_2387 +0.7 1.5 conserved protein of unknown function compare
PP_2616 +0.7 2.0 conserved protein of unknown function compare
PP_1813 +0.6 2.5 ComEA-related protein compare
PP_3559 +0.6 2.1 glycine betaine ABC transporter (permease) compare
PP_2291 +0.6 1.8 conserved protein of unknown function compare
PP_3840 +0.6 1.2 conserved protein of unknown function compare
PP_0352 +0.6 2.8 RNA polymerase sigma-70 factor, ECF subfamily compare
PP_1556 +0.6 1.9 conserved protein of unknown function compare
PP_5279 +0.6 1.6 conserved protein of unknown function compare
PP_4720 +0.6 1.5 putative RNA binding protein compare
PP_1428 +0.6 1.0 Sigma factor AlgU negative regulatory protein compare
PP_1122 +0.6 1.1 OmpA family protein compare
PP_2121 +0.6 1.1 putative Lipoprotein compare
PP_2768 +0.6 1.9 putative Branched-chain amino acid ABC transporter, permease protein compare
PP_2718 +0.6 2.0 arsenic resistance transcriptional regulator compare
PP_4136 +0.6 0.9 Transcriptional regulator, LuxR family compare
PP_5483 +0.6 1.1 conserved protein of unknown function compare
PP_5594 +0.6 0.9 conserved protein of unknown function compare
PP_1909 +0.6 2.6 putative septum formation protein compare
PP_1005 +0.6 2.9 Heme oxygenase compare
PP_3481 +0.6 1.1 conserved exported protein of unknown function compare
PP_1836 +0.6 2.0 putative metal transporter, ZIP family compare
PP_3732 +0.6 3.1 Enoyl-CoA hydratase/isomerase family protein compare
PP_4529 +0.6 1.8 conserved protein of unknown function compare
PP_1322 +0.6 1.4 putative Lipoprotein compare
PP_0319 +0.6 0.9 conserved protein of unknown function compare
PP_0801 +0.6 0.9 conserved exported protein of unknown function compare
PP_0804 +0.6 2.6 Protein secretion ABC efflux system, permease and ATP-binding protein compare
PP_3190 +0.6 1.3 Ornithine cyclodeaminase/mu-crystallin family protein compare
PP_2365 +0.6 2.0 Transcriptional regulator, AraC family compare
PP_2723 +0.6 2.6 Uncharacterized oxidoreductase YhdF compare
PP_5021 +0.6 2.0 Methyl-accepting chemotaxis transducer compare
PP_1328 +0.6 0.9 Protein MraZ compare
PP_1844 +0.6 2.1 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
PP_5538 +0.6 2.9 putative ABC transporter, substrate-binding protein compare
PP_4808 +0.6 1.3 23S rRNA m3psi1915 methyltransferase compare
PP_0805 +0.5 3.5 Outer membrane efflux protein compare
PP_0108 +0.5 2.4 conserved protein of unknown function compare
PP_0806 +0.5 5.1 putative Surface adhesion protein compare
PP_3892 +0.5 0.9 conserved protein of unknown function compare
PP_1410 +0.5 0.7 conserved protein of unknown function compare
PP_2714 +0.5 3.0 Sensor histidine kinase compare
PP_3121 +0.5 1.7 transcriptional regulator, LysR family compare
PP_5152 +0.5 2.3 conserved exported protein of unknown function compare
PP_0182 +0.5 2.6 conserved protein of unknown function compare
PP_0092 +0.5 1.3 putative lipoprotein compare
PP_1938 +0.5 1.6 conserved protein of unknown function compare
PP_5479 +0.5 2.3 transcriptional regulator HTH, LysR family compare
PP_4768 +0.5 2.1 Exonuclease compare
PP_0685 +0.5 0.8 conserved protein of unknown function compare
PP_2716 +0.5 2.2 arsenate reductase compare
PP_3247 +0.5 1.5 Transporter, bile acid/Na+ symporter family compare
PP_0880 +0.5 2.7 dipeptide ABC transporter - putative membrane subunit compare
PP_4957 +0.5 2.3 conserved protein of unknown function compare
PP_2192 +0.5 1.9 putative RNA polymerase sigma-70 factor, ECF subfamily/transmembrane sensor protein compare
PP_2373 +0.5 1.8 conserved protein of unknown function compare
PP_1245 +0.5 2.9 conserved exported protein of unknown function compare
PP_1187 +0.5 2.8 sensor protein compare
PP_4180 +0.5 1.5 conserved protein of unknown function compare
PP_3924 +0.5 1.4 conserved protein of unknown function compare
PP_2435 +0.5 1.9 cysteine desulfurase compare
PP_1113 +0.5 3.2 Pyridoxal-phosphate dependent enzyme family protein compare
PP_2958 +0.5 1.1 Glutaredoxin compare
PP_5604 +0.5 0.6 putative subtilisin-like serine protease compare
PP_1300 +0.5 1.8 putative amino acid ABC transporter - ATP-binding subunit compare
PP_4907 +0.5 1.6 Thiosulfate sulfurtransferase compare
PP_2073 +0.5 1.3 Acetyltransferase, GNAT family compare
PP_5052 +0.5 2.2 tRNA(Leu) mC34,mU34 2'-O-ribose methyltransferase, AdoMet-dependent compare
PP_5667 +0.5 2.1 putative microcin B17-like-processing protein, McbC family compare
PP_3484 +0.5 2.4 Response regulator receiver protein compare
PP_3627 +0.5 2.0 conserved protein of unknown function compare
PP_3258 +0.5 1.7 conserved protein of unknown function compare
PP_0803 +0.5 2.6 Protein secretion ABC efflux system, membrane fusion protein compare
PP_2475 +0.5 1.9 Transcriptional regulator, TetR family compare
PP_2311 +0.5 2.1 Mg-dependent cytoplasmic DNase / RNase compare
PP_4959 +0.5 3.5 diguanylate cyclase compare
PP_0125 +0.5 1.5 putative cytochrome c-type protein compare
PP_3265 +0.5 1.6 putative phosphohydrolase of unknown function compare
PP_5575 +0.5 0.7 conserved protein of unknown function compare
PP_4449 +0.5 1.4 conserved protein of unknown function compare
PP_5589 +0.5 1.6 protein of unknown function containing Rhs repeat-associated core domain compare
PP_0937 +0.5 1.9 endoribonuclease G (RNAse G) compare
PP_5568 +0.5 2.2 conserved membrane protein of unknown function compare
PP_3081 +0.5 1.5 conserved protein of unknown function compare
PP_0257 +0.5 2.2 protein sulfur transferase compare
PP_2747 +0.5 0.9 conserved protein of unknown function compare
PP_2500 +0.5 1.6 conserved protein of unknown function compare
PP_3899 +0.5 1.1 conserved protein of unknown function, hicB family compare
PP_1392 +0.5 2.3 putative NAD-binding protein compare
PP_5337 +0.5 1.9 LysR family transcriptional regulator compare
PP_1570 +0.5 1.6 Head-tail adaptor compare
PP_5480 +0.5 1.8 conserved exported protein of unknown function compare
PP_5139 +0.5 1.8 cadmium translocating P-type ATPase compare
PP_2873 +0.5 1.5 conserved protein of unknown function, UPF0145 family compare
PP_4363 +0.5 3.1 Sensor histidine kinase/response regulator compare
PP_2573 +0.5 2.0 conserved protein of unknown function compare
PP_4528 +0.5 0.4 conserved protein of unknown function compare
PP_5045 +0.5 1.4 tRNA sulfurtransferase compare
PP_2331 +0.5 2.1 conserved membrane protein of unknown function compare
PP_2795 +0.4 1.6 AMP-binding domain protein compare
PP_5705 +0.4 0.9 protein of unknown function compare
PP_4100 +0.4 2.4 Transcriptional regulator, Cro/CI family compare
PP_4904 +0.4 2.3 Flagellar motor rotation protein compare
PP_0941 +0.4 1.7 putative ribosome associated protein compare
PP_2307 +0.4 0.5 conserved protein of unknown function compare
PP_5008 +0.4 0.9 Poly granule-associated protein compare
PP_5472 +0.4 1.7 conserved exported protein of unknown function compare
PP_4981 +0.4 1.0 polyisoprene-binding protein, acidic stress response factor compare
PP_1265 +0.4 1.5 conserved protein of unknown function compare
PP_2847 +0.4 0.8 Urease accessory protein UreJ compare
PP_2214 +0.4 1.7 3-hydroxyacyl-CoA dehydrogenase type-2 compare
PP_1057 +0.4 2.3 Transcriptional regulator, PadR family compare
PP_4353 +0.4 2.7 Flagellar biosynthetic protein fliR compare
PP_2403 +0.4 0.4 Chemotaxis protein CheY compare
PP_5486 +0.4 1.0 conserved protein of unknown function compare
PP_2442 +0.4 1.1 conserved protein of unknown function, DUF480 family compare
PP_3761 +0.4 3.3 Sensor histidine kinase/response regulator compare
PP_5066 +0.4 2.3 K(+)/H(+) antiporter NhaP2 compare
PP_3249 +0.4 1.8 putative oxidoreductase compare
PP_5053 +0.4 2.6 Protein-export protein SecB compare
PP_3075 +0.4 1.1 putative transcriptional regulator compare
PP_1875 +0.4 2.3 Sensor histidine kinase/response regulator compare
PP_2772 +0.4 2.0 putative Monooxygenase compare
PP_3766 +0.4 0.8 Lactoylglutathione lyase compare
PP_4843 +0.4 1.8 putative Urea ABC transporter, permease protein compare
PP_5713 +0.4 1.9 conserved protein of unknown function compare
PP_3640 +0.4 1.5 Transcriptional regulator, AraC family compare
PP_3118 +0.4 2.2 DNA linked enzyme involved in DNA repair compare
PP_4286 +0.4 2.1 allantoinase compare
PP_1494 +0.4 1.6 Response regulator/GGDEF domain protein compare
PP_2793 +0.4 1.0 Acyl-CoA dehydrogenase family protein compare
PP_0274 +0.4 0.8 putative transcriptional regulator containing HTH domain compare
PP_2740 +0.4 1.1 Transcriptional regulator, MerR family compare
PP_1489 +0.4 1.2 CheW domain protein compare
PP_1071 +0.4 1.5 glutamate / aspartate ABC transporter - periplasmic binding protein compare
PP_5241 +0.4 1.0 DNA-binding response regulator, LuxR family compare
PP_4769 +0.4 1.4 conserved protein of unknown function compare
PP_5574 +0.4 1.8 conserved protein of unknown function compare
PP_3400 +0.4 1.7 alpha-ketoglutarate- and Fe(II)-dependent dioxygenase compare
PP_0645 +0.4 2.1 protein of unknown function compare
PP_3806 +0.4 1.5 Hydrolase, isochorismatase family compare
PP_2210 +0.4 1.1 LysR family transcriptional regulator compare
PP_4223 +0.4 0.6 diaminobutyrate-2-oxoglutarate transaminase compare
PP_3304 +0.4 2.3 Multidrug resistance transporter, Bcr/CflA family compare
PP_0754 +0.4 1.7 conserved protein of unknown function compare
PP_2866 +0.4 1.7 FMN-dependent NADH-azoreductase 1 compare
PP_3685 +0.4 1.6 conserved protein of unknown function compare
PP_3849 +0.4 2.7 putative calcium-binding protein, hemolysin-type compare
PP_1087 +0.4 2.2 Outer membrane protein, OmpA family compare
PP_4138 +0.4 1.5 Chromate reductase compare
PP_4945 +0.4 2.0 23S rRNA m(6)A2030 methyltransferase compare
PP_5478 +0.4 2.2 conserved protein of unknown function compare
PP_0556 +0.4 1.0 Acetoin catabolism protein compare
PP_1635 +0.4 1.5 DNA-binding response regulator compare
PP_2400 +0.4 2.4 conserved protein of unknown function compare
PP_3174 +0.4 2.0 putative Oxidoreductase compare
PP_0574 +0.4 2.6 DNA-binding response regulator, LuxR family compare


Specific Phenotypes

None in this experiment

For Pseudomonas putida KT2440 in temperature experiments

For temperature D-Glucose across organisms