Experiment set18IT049 for Pseudomonas putida KT2440

Compare to:

Growth at 34C

200 most important genes:

  gene name fitness t score description  
PP_0293 -7.0 -3.6 Imidazole glycerol phosphate synthase subunit HisF compare
PP_5346 -6.1 -8.4 pyruvate carboxylase subunit B compare
PP_0083 -6.1 -4.2 tryptophan synthase beta chain compare
PP_4679 -5.8 -8.0 acetohydroxybutanoate synthase / acetolactate synthase compare
PP_0289 -5.7 -11.0 Imidazoleglycerol-phosphate dehydratase compare
PP_1985 -5.7 -6.5 3-isopropylmalate dehydratase large subunit compare
PP_0184 -5.6 -7.7 Argininosuccinate lyase compare
PP_0082 -5.6 -7.7 tryptophan synthase alpha chain compare
PP_1995 -5.6 -11.3 N-(5'-phosphoribosyl)anthranilate isomerase compare
PP_5185 -5.5 -9.2 acetylglutamate kinase-like protein (regulatory domain)/amino acid N-acetyltransferase compare
PP_4696 -5.3 -3.6 Nitrogen regulation protein NR(I) compare
PP_0967 -4.9 -10.6 histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) compare
PP_0290 -4.9 -9.2 Imidazole glycerol phosphate synthase subunit HisH compare
PP_1988 -4.8 -8.5 3-isopropylmalate dehydrogenase compare
PP_5347 -4.8 -12.7 pyruvate carboxylase subunit A compare
PP_2371 -4.6 -7.5 Sulphite reductase hemoprotein, beta subunit compare
PP_5348 -4.6 -8.5 Transcriptional regulator, LysR family compare
PP_0292 -4.6 -3.6 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
PP_4804 -4.5 -3.1 RlpA-like lipoprotein compare
PP_2370 -4.4 -4.8 conserved protein of unknown function compare
PP_3511 -4.3 -8.3 Branched-chain-amino-acid aminotransferase compare
PP_1025 -4.3 -11.5 2-isopropylmalate synthase compare
PP_0966 -4.2 -10.0 Histidinol dehydrogenase compare
PP_0965 -4.2 -7.8 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
PP_4678 -4.1 -12.3 Ketol-acid reductoisomerase compare
PP_5098 -4.1 -6.7 methionine biosynthesis protein MetW compare
PP_1079 -3.9 -6.1 Ornithine carbamoyltransferase compare
PP_1022 -3.9 -6.9 glucose 6-phosphate-1-dehydrogenase compare
PP_5303 -3.8 -5.9 aminoacrylate/iminopropionate hydrolase/deaminase compare
PP_1088 -3.7 -9.9 Argininosuccinate synthase compare
PP_4890 -3.7 -5.1 ATP phosphoribosyltransferase regulatory subunit compare
PP_3999 -3.6 -10.7 Uroporphyrinogen-III C-methyltransferase/Precorrin-2 dehydrogenase/Sirohydrochlorin ferrochelatase compare
PP_0421 -3.6 -6.4 Anthranilate phosphoribosyltransferase compare
PP_5097 -3.5 -9.7 homoserine O-acetyltransferase compare
PP_4680 -3.5 -11.0 acetohydroxybutanoate synthase / acetolactate synthase compare
PP_2001 -3.5 -7.1 O-succinylhomoserine sulfhydrylase compare
PP_0422 -3.5 -4.8 Indole-3-glycerol phosphate synthase compare
PP_4909 -3.4 -6.3 phosphoserine phosphatase compare
PP_5289 -3.4 -4.4 Acetylglutamate kinase compare
PP_1231 -3.2 -7.1 quinolinate synthase [4Fe-4S] cluster subunit compare
PP_5017 -3.1 -1.6 Sec-independent protein translocase protein TatB compare
PP_5155 -3.1 -3.3 D-3-phosphoglycerate dehydrogenase / alpha-ketoglutarate reductase compare
PP_0417 -3.0 -12.1 Anthranilate synthase component 1 compare
PP_4700 -2.9 -2.0 pantothenate synthetase compare
PP_1986 -2.9 -2.7 3-isopropylmalate dehydratase small subunit compare
PP_2328 -2.8 -5.7 Phosphoadenosine phosphosulfate reductase compare
PP_5095 -2.8 -1.7 pyrroline-5-carboxylate reductase compare
PP_1912 -2.7 -5.4 Phosphate acyltransferase compare
PP_5217 -2.7 -8.7 Polyphosphate kinase compare
PP_4122 -2.6 -2.2 proton-pumping NADH:ubiquinone oxidoreductase, respiratory complex I, subunit E compare
PP_2327 -2.6 -4.8 transcriptional dual regulator / CysB-O-acetyl-L-serine compare
PP_5128 -2.6 -5.6 Dihydroxy-acid dehydratase compare
PP_5014 -2.5 -2.1 Phosphoribosyl-AMP cyclohydrolase compare
PP_2168 -2.5 -7.0 Transaldolase compare
PP_4874 -2.4 -1.9 50S ribosomal protein L9 compare
PP_0787 -2.4 -3.7 quinolinate phosphoribosyltransferase (decarboxylating) monomer compare
PP_4785 -2.4 -5.1 conserved exported protein of unknown function compare
PP_4830 -2.3 -5.3 precorrin-6Y C(5,15)-methyltransferase compare
PP_0420 -2.2 -6.7 aminodeoxychorismate synthase / para-aminobenzoate synthase multi-enzyme complex compare
PP_1898 -2.2 -2.3 MotA/TolQ/ExbB proton channel family protein compare
PP_5216 -2.2 -1.5 exopolyphosphatase compare
PP_4964 -2.1 -4.6 D-erythrose 4-phosphate dehydrogenase compare
PP_2378 -2.1 -2.9 Fe/S biogenesis protein NfuA compare
PP_1664 -2.1 -3.8 phosphoribosylglycinamide formyltransferase 1 compare
PP_0362 -2.1 -8.4 Biotin synthase compare
PP_1764 -2.0 -2.7 Phosphoglycolate phosphatase 2 compare
PP_1673 -2.0 -4.6 cobyrinate a,c-diamide synthase compare
PP_3508 -2.0 -3.7 Protein CobW compare
PP_2375 -1.9 -10.2 cobalamin-dependent methionine synthase compare
PP_5015 -1.9 -2.4 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
PP_4994 -1.9 -4.0 conserved protein of unknown function compare
PP_0393 -1.9 -2.2 putative 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase compare
PP_3417 -1.9 -2.6 D-gluconate transporter compare
PP_4902 -1.8 -2.6 Oligoribonuclease compare
PP_1734 -1.8 -3.3 Probable septum site-determining protein MinC compare
PP_0364 -1.8 -5.4 pimeloyl-[acp] methyl ester esterase compare
PP_4828 -1.7 -1.1 Precorrin-8X methylmutase compare
PP_4984 -1.7 -6.9 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase compare
PP_0547 -1.7 -5.3 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase compare
PP_0365 -1.7 -5.8 Malonyl-[acyl-carrier protein] O-methyltransferase compare
PP_4977 -1.6 -6.4 5,10-methylenetetrahydrofolate reductase compare
PP_0833 -1.6 -1.8 queuine tRNA-ribosyltransferase compare
PP_4895 -1.6 -3.0 tRNA dimethylallyltransferase compare
PP_4829 -1.6 -3.5 putative precorrin-3B synthase compare
PP_0363 -1.6 -7.0 8-amino-7-oxononanoate synthase compare
PP_0366 -1.5 -4.3 dethiobiotin synthetase compare
PP_1233 -1.5 -3.1 sulfurtransferase compare
PP_1678 -1.5 -2.5 bifunctional cobinamide-P guanylyltransferase - adenosylcobinamide kinase compare
PP_0291 -1.5 -1.6 conserved protein of unknown function compare
PP_1672 -1.5 -5.4 cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase compare
PP_0962 -1.5 -2.9 toluene-tolerance protein compare
PP_2720 -1.5 -1.5 conserved protein of unknown function compare
PP_5028 -1.5 -3.1 proline iminopeptidase compare
PP_5350 -1.4 -2.8 Transcriptional regulator, RpiR family compare
PP_1994 -1.4 -2.3 tRNA pseudouridine (38-40)synthase compare
PP_1675 -1.4 -6.3 Subunit of adenosylcobinamide-phosphate synthase beta component compare
PP_4126 -1.4 -1.5 NADH-quinone oxidoreductase subunit I compare
PP_1426 -1.4 -6.5 L-aspartate oxidase compare
PP_4338 -1.4 -6.6 Chemotaxis histidine kinase CheA compare
PP_4782 -1.4 -2.1 Phosphomethylpyrimidine kinase compare
PP_1733 -1.4 -2.0 membrane ATPase of the MinC-MinD-MinE system compare
PP_3507 -1.4 -7.4 Aerobic cobaltochelatase subunit CobN compare
PP_4936 -1.4 -5.6 O-antigen polymerase compare
PP_3409 -1.4 -3.0 putative Cobalamin biosynthesis protein cobE compare
PP_5639 -1.4 -6.7 conserved exported protein of unknown function compare
PP_0959 -1.4 -2.2 phospholipid ABC transporter compare
PP_4701 -1.4 -1.1 glucose-6-phosphate isomerase compare
PP_5104 -1.4 -5.6 thiazole synthase compare
PP_4722 -1.3 -3.3 Transcription elongation factor GreA compare
PP_5203 -1.3 -3.8 5-formyltetrahydrofolate cyclo-ligase compare
PP_1062 -1.3 -1.8 MutT/nudix family protein compare
PP_2878 -1.3 -2.3 conserved protein of unknown function compare
PP_1681 -1.3 -5.6 cobalamin 5'-phosphate synthase / Cobalamin synthase compare
PP_5310 -1.3 -3.9 junction-specific ATP-dependent DNA helicase compare
PP_1428 -1.3 -1.4 Sigma factor AlgU negative regulatory protein compare
PP_3580 -1.3 -2.7 conserved protein of unknown function compare
PP_3821 -1.3 -6.3 UTP-glucose-1-phosphate uridylyltransferase compare
PP_0512 -1.3 -0.9 hypothetical protein compare
PP_4940 -1.2 -5.1 Putative glycosyltransferase compare
PP_3506 -1.2 -2.4 Magnesium chelatase, subunit ChII compare
PP_0406 -1.2 -1.6 Nucleotidyltransferase family protein compare
PP_1783 -1.2 -2.0 dTDP-glucose pyrophosphorylase compare
PP_2070 -1.2 -1.5 Transcriptional regulator, AraC family compare
PP_4832 -1.2 -1.8 Precorrin-6x reductase compare
PP_0434 -1.2 -2.9 Anhydro-N-acetylmuramic acid kinase compare
PP_1355 -1.2 -4.9 Muropeptide permease AmpG compare
PP_2145 -1.2 -1.8 beta-N-acetylglucosaminidase compare
PP_1677 -1.2 -3.4 Adenosyl-cobyric acid synthase compare
PP_5423 -1.2 -1.9 conserved membrane protein of unknown function compare
PP_1778 -1.1 -4.1 Lipopolysaccharide ABC export system, permease protein compare
PP_1656 -1.1 -3.6 ATP:GTP 3'-pyrophosphotransferase compare
PP_5507 -1.1 -3.9 protein of unknown function compare
PP_1739 -1.1 -3.4 conserved membrane protein of unknown function compare
PP_3522 -1.1 -1.8 conserved protein of unknown function compare
PP_2147 -1.1 -1.8 conserved exported protein of unknown function compare
PP_5451 -1.1 -3.5 protein of unknown function compare
PP_4406 -1.1 -2.2 conserved protein of unknown function compare
PP_1045 -1.1 -1.0 Type II secretion pathway protein XcpP compare
PP_1304 -1.1 -4.3 sulfate adenylyltransferase subunit 1/adenylyl-sulfate kinase compare
PP_0339 -1.1 -0.7 Pyruvate dehydrogenase E1 component compare
PP_4695 -1.1 -5.2 Sensory box histidine kinase compare
PP_1676 -1.1 -2.9 subunit of adenosylcobinamide-phosphate synthase beta component compare
PP_1654 -1.1 -1.6 cysteine synthase B compare
PP_3883 -1.1 -2.2 putative Phage holin compare
PP_5689 -1.1 -3.2 conserved protein of unknown function compare
PP_4529 -1.1 -2.6 conserved protein of unknown function compare
PP_0022 -1.1 -1.0 hypothetical protein compare
PP_1872 -1.0 -4.5 glutamate-pyruvate aminotransferase compare
PP_0949 -1.0 -3.2 putative ATP-binding protein UPF0042 compare
PP_4938 -1.0 -5.1 putative Glycosyl transferase compare
PP_1679 -1.0 -1.5 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase compare
PP_4479 -1.0 -3.7 arginine N-succinyltransferase, subunit beta compare
PP_4724 -1.0 -0.7 Carbamoyl-phosphate synthase small chain compare
PP_4120 -1.0 -1.9 NADH-quinone oxidoreductase subunit B compare
PP_5227 -1.0 -3.8 diaminopimelate decarboxylase compare
PP_1589 -1.0 -4.3 uridylyltransferase compare
PP_2307 -1.0 -2.2 conserved protein of unknown function compare
PP_4058 -1.0 -4.4 1,4-alpha-glucan branching enzyme compare
PP_0593 -1.0 -0.9 putative ribosome-binding factor compare
PP_1217 -1.0 -2.7 Holliday junction ATP-dependent DNA helicase RuvB compare
PP_4340 -1.0 -2.7 response regulator for chemotactic signal transduction compare
PP_1346 -1.0 -2.5 Glutamate N-acetyltransferase/Amino-acid acetyltransferase compare
PP_2144 -1.0 -2.2 Transcriptional regulator, TetR family compare
PP_0719 -1.0 -1.0 ribosome-associated potassium-dependent informational ATP/GTPase compare
PP_3241 -1.0 -1.2 conserved exported protein of unknown function compare
PP_3946 -1.0 -1.2 HTH-type transcriptional repressor NicR compare
PP_4827 -0.9 -4.2 Precorrin-2 C(20)-methyltransferase compare
PP_4693 -0.9 -2.5 RNA polymerase-binding transcription factor DksA compare
PP_1770 -0.9 -1.5 3-phosphoshikimate 1-carboxyvinyltransferase compare
PP_3245 -0.9 -1.4 conserved protein of unknown function compare
PP_3824 -0.9 -1.2 conserved exported protein of unknown function compare
PP_4379 -0.9 -2.0 Beta-ketoacyl-acyl-carrier-protein synthase I compare
PP_3034 -0.9 -1.8 putative Regulator protein compare
PP_1553 -0.9 -1.1 conserved protein of unknown function compare
PP_4099 -0.9 -8.8 two-componenent system BarA/UvrY - regulatory subunit compare
PP_3766 -0.9 -2.1 Lactoylglutathione lyase compare
PP_5621 -0.9 -0.8 protein of unknown function compare
PP_1468 -0.9 -1.0 Tyrosine recombinase XerD compare
PP_2681 -0.9 -1.2 coenzyme PQQ synthesis protein D compare
PP_2862 -0.9 -3.4 Undecaprenyl-diphosphatase compare
PP_1979 -0.9 -1.3 putative Hydrolase compare
PP_0789 -0.9 -2.7 N-acetyl-anhydromuramyl-L-alanine-amidase compare
PP_2345 -0.9 -1.6 conserved exported protein of unknown function compare
PP_2857 -0.9 -1.0 conserved exported protein of unknown function compare
PP_4699 -0.9 -2.2 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
PP_2107 -0.9 -1.5 conserved protein of unknown function compare
PP_1552 -0.9 -1.9 putative Phage replication protein compare
PP_1826 -0.9 -1.5 Hydrolase, isochorismatase family compare
PP_3192 -0.9 -2.0 conserved protein of unknown function compare
PP_0957 -0.9 -1.5 D-arabinose 5-phosphate isomerase compare
PP_1800 -0.9 -5.2 Oxidoreductase Rmd compare
PP_1780 -0.9 -6.9 putative mannosyltransferase compare
PP_3649 -0.9 -2.1 Transcriptional regulator, GntR family compare
PP_4988 -0.9 -2.9 signal transduction histidine kinase CheA/CheY-like receiver compare
PP_0735 -0.9 -0.8 molybdopterin-synthase adenylyltransferase compare
PP_2748 -0.9 -1.0 putative Branched-chain amino acid ABC transporter, ATP-binding protein compare
PP_1650 -0.9 -7.7 Sensor protein GacS compare
PP_0138 -0.8 -4.1 conserved membrane protein of unknown function compare
PP_2903 -0.8 -1.5 peptidyl-prolyl cis-trans isomerase B (rotamase B) compare
PP_2217 -0.8 -1.7 enoyl-CoA hydratase compare


Specific Phenotypes

None in this experiment

For Pseudomonas putida KT2440 in temperature experiments

For temperature D-Glucose across organisms