Experiment set18IT049 for Pseudomonas putida KT2440

Compare to:

Growth at 34C

200 most detrimental genes:

  gene name fitness t score description  
PP_5329 +1.6 5.8 putative phosphate ABC transporter, periplasmic phosphate-binding protein compare
PP_5748 +1.6 1.6 cytochrome c heme lyase subunit compare
PP_5328 +1.4 2.9 putative phosphate transport system permease protein compare
PP_2740 +1.4 3.8 Transcriptional regulator, MerR family compare
PP_0653 +1.4 2.8 conserved protein of unknown function compare
PP_1410 +1.3 1.6 conserved protein of unknown function compare
PP_2403 +1.2 2.1 Chemotaxis protein CheY compare
PP_3874 +1.0 2.1 conserved protein of unknown function compare
PP_0888 +1.0 2.6 Photosynthetic apparatus regulatory protein RegA compare
PP_2568 +1.0 1.6 Ring-cleaving dioxygenase compare
PP_5051 +1.0 3.8 conserved protein of unknown function compare
PP_0168 +1.0 9.1 putative surface adhesion protein compare
PP_4528 +1.0 2.1 conserved protein of unknown function compare
PP_4227 +0.9 2.3 conserved protein of unknown function compare
PP_3243 +0.9 3.9 Acetyltransferase, GNAT family compare
PP_5093 +0.9 1.9 twitching motility protein compare
PP_0167 +0.9 7.8 Toxin secretion ATP-binding protein compare
PP_3110 +0.9 1.5 protein of unknown function compare
PP_0827 +0.9 2.6 putative phosphonate transport system permease protein PtxC compare
PP_4519 +0.9 7.1 Agglutination protein compare
PP_1560 +0.9 3.6 conserved protein of unknown function compare
PP_0166 +0.8 6.5 HlyD family secretion protein compare
PP_3265 +0.8 2.0 putative phosphohydrolase of unknown function compare
PP_5546 +0.8 1.6 conserved protein of unknown function compare
PP_1215 +0.8 0.9 Crossover junction endodeoxyribonuclease RuvC compare
PP_2118 +0.8 2.7 conserved protein of unknown function compare
PP_2122 +0.8 2.1 molybdenum cofactor biosynthesis protein B compare
PP_0803 +0.8 4.3 Protein secretion ABC efflux system, membrane fusion protein compare
PP_5218 +0.8 2.3 DedA family protein compare
PP_5232 +0.8 2.2 conserved protein of unknown function compare
PP_2575 +0.8 1.7 conserved exported protein of unknown function compare
PP_0804 +0.8 5.0 Protein secretion ABC efflux system, permease and ATP-binding protein compare
PP_0307 +0.8 3.0 conserved exported protein of unknown function compare
PP_3693 +0.8 2.1 putative Transcriptional regulator MvaT, P16 subunit compare
PP_0855 +0.8 2.2 conserved protein of unknown function compare
PP_0999 +0.8 1.9 carbamate kinase compare
PP_2972 +0.8 1.4 conserved protein of unknown function compare
PP_2330 +0.8 3.1 conserved protein of unknown function compare
PP_2121 +0.8 1.4 putative Lipoprotein compare
PP_5000 +0.8 0.8 peptidase component of the ATP-dependent HslVU protease compare
PP_3840 +0.7 1.4 conserved protein of unknown function compare
PP_5705 +0.7 2.0 protein of unknown function compare
PP_2530 +0.7 2.2 conserved protein of unknown function compare
PP_0165 +0.7 6.3 GGDEF domain protein compare
PP_1366 +0.7 1.0 Transcriptional regulator MvaT, P16 subunit compare
PP_4373 +0.7 5.9 Transcriptional regulator FleQ compare
PP_3892 +0.7 1.2 conserved protein of unknown function compare
PP_4792 +0.7 1.5 conserved exported protein of unknown function compare
PP_0001 +0.7 1.5 probable chromosome-partitioning protein compare
PP_3730 +0.7 1.4 Transcriptional regulatory protein AruR compare
PP_3339 +0.7 2.7 conserved exported protein of unknown function compare
PP_3074 +0.7 2.7 D-beta-hydroxybutyrate permease compare
PP_1623 +0.7 4.1 RNA polymerase, sigma S (sigma 38) factor compare
PP_1713 +0.7 1.5 Transcriptional regulator PcaQ compare
PP_4253 +0.7 1.8 cytochrome c oxidase subunit, cbb3-type compare
PP_4556 +0.7 2.6 conserved protein of unknown function compare
PP_2023 +0.7 3.1 Glutathione S-transferase family protein compare
PP_2684 +0.7 2.2 conserved membrane protein of unknown function compare
PP_0801 +0.7 1.0 conserved exported protein of unknown function compare
PP_0775 +0.7 0.8 conserved protein of unknown function compare
PP_3234 +0.7 2.6 Heat shock protein, HSP20 family compare
PP_0640 +0.7 2.8 conserved protein of unknown function compare
PP_0240 +0.7 1.8 Aliphatic sulfonates import ATP-binding protein SsuB compare
PP_2845 +0.7 2.9 urease subunit alpha compare
PP_0805 +0.7 4.0 Outer membrane efflux protein compare
PP_3761 +0.6 4.6 Sensor histidine kinase/response regulator compare
PP_1097 +0.6 0.9 Methionine--tRNA ligase compare
PP_1968 +0.6 2.4 TetR family transcriptional regulator compare
PP_4363 +0.6 3.9 Sensor histidine kinase/response regulator compare
PP_2340 +0.6 1.9 conserved protein of unknown function compare
PP_3551 +0.6 1.1 DNA-binding response regulator, LuxR family compare
PP_5066 +0.6 2.6 K(+)/H(+) antiporter NhaP2 compare
PP_3682 +0.6 1.5 conserved protein of unknown function compare
PP_4426 +0.6 3.0 Amino acid ABC transporter, permease protein compare
PP_0367 +0.6 2.7 conserved protein of unknown function compare
PP_1178 +0.6 2.4 conserved protein of unknown function compare
PP_4162 +0.6 1.8 conserved membrane protein of unknown function compare
PP_5580 +0.6 1.0 protein of unknown function compare
PP_3073 +0.6 3.3 3-hydroxybutyrate dehydrogenase compare
PP_1787 +0.6 3.6 conserved protein of unknown function compare
PP_4133 +0.6 1.0 Transcriptional regulator-related protein compare
PP_4959 +0.6 4.2 diguanylate cyclase compare
PP_2646 +0.6 1.9 conserved protein of unknown function compare
PP_5569 +0.6 1.8 protein of unknown function of phage origin compare
PP_3337 +0.6 2.6 conserved membrane protein of unknown function compare
PP_1862 +0.6 1.6 conserved membrane protein of unknown function compare
PP_0063 +0.6 2.1 putative Lipid A biosynthesis lauroyl acyltransferase compare
PP_0806 +0.6 5.2 putative Surface adhesion protein compare
PP_5161 +0.6 3.2 putative lysophospholipase compare
PP_4470 +0.6 2.4 putative transcriptional regulator (Arc domain-containing) compare
PP_3560 +0.6 3.9 Transcriptional regulator, LysR family compare
PP_1513 +0.6 1.6 Ribosomal RNA small subunit methyltransferase J compare
PP_4520 +0.6 2.2 conserved protein of unknown function compare
PP_0274 +0.6 1.3 putative transcriptional regulator containing HTH domain compare
PP_t11 +0.6 1.3 tRNA-Lys compare
PP_4891 +0.6 2.6 integral membrane ATP-dependent zinc metallopeptidase / HflK-HflC complex compare
PP_1368 +0.6 2.1 putative membrane protein containing a glycosyltransferase domain compare
PP_2055 +0.6 1.7 putative isomerase compare
PP_5201 +0.6 0.9 conserved protein of unknown function, UPF0149 family compare
PP_3559 +0.6 1.5 glycine betaine ABC transporter (permease) compare
PP_2597 +0.6 1.7 conserved protein of unknown function compare
PP_2923 +0.5 1.1 conserved protein of unknown function compare
PP_5027 +0.5 0.9 D-tyrosyl-tRNA(Tyr) deacylase compare
PP_2907 +0.5 0.9 DNA-binding response regulator compare
PP_0355 +0.5 3.0 Response regulator compare
PP_4814 +0.5 1.9 ATP-dependent protease La domain protein compare
PP_2864 +0.5 2.0 conserved protein of unknown function compare
PP_1864 +0.5 0.9 conserved protein of unknown function compare
PP_0414 +0.5 1.8 Polyamine ABC transporter, permease protein compare
PP_4271 +0.5 0.7 conserved protein of unknown function compare
PP_3685 +0.5 1.9 conserved protein of unknown function compare
PP_5022 +0.5 1.2 Glutamine transport ATP-binding protein GlnQ compare
PP_t10 +0.5 1.2 tRNA-Pro compare
PP_4214 +0.5 1.5 pyoverdine biosynthesis related protein compare
PP_1269 +0.5 0.8 Universal stress protein family compare
PP_3926 +0.5 1.0 short-chain dehydrogenase compare
PP_0319 +0.5 1.1 conserved protein of unknown function compare
PP_3930 +0.5 1.2 conserved exported protein of unknown function compare
PP_3891 +0.5 1.8 conserved protein of unknown function compare
PP_5145 +0.5 4.5 phosphoenolpyruvate-dependent regulator (with NPR and NTR proteins) compare
PP_4534 +0.5 1.9 conserved protein of unknown function compare
PP_2926 +0.5 3.5 UDP-glucose 6-dehydrogenase compare
PP_1322 +0.5 0.7 putative Lipoprotein compare
PP_0398 +0.5 1.2 Thiosulfate sulfurtransferase GlpE compare
PP_0556 +0.5 1.9 Acetoin catabolism protein compare
PP_1122 +0.5 1.1 OmpA family protein compare
PP_0244 +0.5 1.9 conserved protein of unknown function compare
PP_5667 +0.5 1.1 putative microcin B17-like-processing protein, McbC family compare
PP_4263 +0.5 1.4 putative membrane-bounded cytochrome biogenesis cycZ-like domain, copper tolerance protein compare
PP_3143 +0.5 2.8 Transcriptional regulator, LysR family compare
PP_2291 +0.5 1.9 conserved protein of unknown function compare
PP_4353 +0.5 2.3 Flagellar biosynthetic protein fliR compare
PP_2079 +0.5 1.8 conserved protein of unknown function compare
PP_1562 +0.5 1.1 putative Phage terminase, small subunit compare
PP_5575 +0.5 0.9 conserved protein of unknown function compare
PP_3742 +0.5 2.0 Glutathione S-transferase family protein compare
PP_0998 +0.5 2.3 conserved protein of unknown function compare
PP_4946 +0.5 2.6 sodium/L-proline transporter compare
PP_4375 +0.5 2.3 flagellar chaperone, inhibits premature FliC assembly compare
PP_2572 +0.5 2.8 conserved protein of unknown function compare
PP_5007 +0.5 0.8 Polyhydroxyalkanoate granule-associated protein GA2 compare
PP_1824 +0.5 1.0 Smr domain protein compare
PP_0943 +0.5 2.2 conserved protein of unknown function compare
PP_0400 +0.5 1.9 CO2+/MG2+ efflux protein compare
PP_2873 +0.5 1.4 conserved protein of unknown function, UPF0145 family compare
PP_3726 +0.5 0.7 Enoyl-CoA hydratase/isomerase family protein compare
PP_4789 +0.5 2.2 heat shock protein, Co2+ and Mg2+ efflux protein compare
PP_3312 +0.5 0.5 putative Heat shock protein compare
PP_1271 +0.5 2.1 putative Multidrug efflux MFS transporter compare
PP_4045 +0.5 1.5 conserved protein of unknown function compare
PP_1984 +0.5 2.2 Transcriptional regulator, LysR family compare
PP_3907 +0.5 2.0 conserved protein of unknown function compare
PP_0332 +0.5 1.6 putative Acyltransferase compare
PP_5528 +0.5 0.9 conserved protein of unknown function compare
PP_4247 +0.5 0.8 Exonuclease compare
PP_1498 +0.5 2.2 putative Lipoprotein compare
PP_5456 +0.5 0.9 conserved protein of unknown function compare
PP_5159 +0.5 1.9 conserved protein of unknown function compare
PP_4957 +0.5 1.5 conserved protein of unknown function compare
PP_4531 +0.5 1.3 conserved exported protein of unknown function compare
PP_2733 +0.5 2.0 conserved membrane protein of unknown function compare
PP_4102 +0.5 2.0 conserved protein of unknown function compare
PP_1218 +0.5 1.2 putative acyl-CoA thioesterase compare
PP_5337 +0.5 1.4 LysR family transcriptional regulator compare
PP_1544 +0.5 1.5 conserved protein of unknown function compare
PP_1559 +0.5 1.3 Holin compare
PP_4356 +0.5 1.3 Flagellar protein FliO compare
PP_0685 +0.5 1.4 conserved protein of unknown function compare
PP_2061 +0.5 1.5 conserved protein of unknown function compare
PP_2192 +0.5 1.6 putative RNA polymerase sigma-70 factor, ECF subfamily/transmembrane sensor protein compare
PP_0113 +0.5 1.4 methionine ABC transporter, permease protein compare
PP_5520 +0.5 1.7 conserved protein of unknown function compare
PP_2497 +0.4 0.9 conserved protein of unknown function compare
PP_0150 +0.4 1.6 conserved exported protein of unknown function compare
PP_5502 +0.4 1.0 ribosome modulation factor compare
PP_1310 +0.4 1.4 conserved hypothetical protein compare
PP_1578 +0.4 2.4 conserved protein of unknown function compare
PP_0313 +0.4 1.3 putative electron transfer flavoprotein beta subunit compare
PP_4937 +0.4 1.3 toluene tolerance protein compare
PP_4793 +0.4 1.1 conserved protein of unknown function compare
PP_2890 +0.4 1.8 exodeoxyribonuclease III / apurinic/apyrimidinic endodeoxyribonuclease VI compare
PP_3194 +0.4 1.8 conserved protein of unknown function compare
PP_4066 +0.4 0.9 methylglutaconyl-CoA hydratase compare
PP_5191 +0.4 1.4 conserved exported protein of unknown function compare
PP_3863 +0.4 1.5 putative Phage tail protein compare
PP_1000 +0.4 1.3 ornithine carbamoyltransferase, catabolic compare
PP_3814 +0.4 1.2 Polyamine ABC transporter, periplasmic polyamine-binding protein compare
PP_0676 +0.4 1.5 putative Transcription elongation factor compare
PP_2950 +0.4 1.0 conserved protein of unknown function compare
PP_4215 +0.4 1.4 pyoverdine biosynthesis related protein compare
PP_3407 +0.4 1.0 conserved protein of unknown function compare
PP_3562 +0.4 1.7 conserved exported protein of unknown function compare
PP_1466 +0.4 1.1 Long-chain acyl-CoA thioester hydrolase family protein compare
PP_0937 +0.4 1.8 endoribonuclease G (RNAse G) compare
PP_5125 +0.4 2.1 Formamidopyrimidine-DNA glycosylase compare
PP_4349 +0.4 1.8 conserved protein of unknown function compare
PP_2203 +0.4 1.3 conserved protein of unknown function compare
PP_5162 +0.4 1.4 conserved exported protein of unknown function compare
PP_5604 +0.4 0.6 putative subtilisin-like serine protease compare
PP_2389 +0.4 2.2 conserved protein of unknown function compare


Specific Phenotypes

None in this experiment

For Pseudomonas putida KT2440 in temperature experiments

For temperature D-Glucose across organisms