Experiment set18IT044 for Pseudomonas simiae WCS417

200 most important genes:

gene	name	fitness	t score	description
PS417_06375		-4.4	-1.6	deoxycytidine triphosphate deaminase
PS417_04365		-2.1	-1.5	3-deoxy-D-manno-octulosonate 8-phosphate phosphatase
PS417_26900		-2.0	-3.0	L-cystine transporter tcyP
PS417_08220		-1.9	-1.6	epimerase
PS417_27300		-1.8	-1.3	cell division protein ZapA
PS417_20125		-1.8	-5.0	phosphoribosylglycinamide formyltransferase
PS417_27800		-1.7	-2.0	exodeoxyribonuclease III
PS417_08125		-1.7	-0.9	prephenate dehydratase
PS417_01965		-1.7	-2.7	fimbriae biosynthesis protein
PS417_04380		-1.7	-1.4	ABC transporter permease
PS417_15975		-1.6	-2.2	glutamate carboxypeptidase
PS417_08410		-1.5	-2.3	hypothetical protein
PS417_01915		-1.5	-0.8	ATP-dependent protease ATP-binding subunit HslU
PS417_21430		-1.5	-1.6	3-oxoacyl-ACP synthase
PS417_00180		-1.5	-3.0	tryptophan synthase subunit alpha
PS417_08090		-1.5	-1.0	3-oxoacyl-ACP reductase
PS417_15090		-1.4	-2.7	hypothetical protein
PS417_23135		-1.4	-2.3	GTP-binding protein
PS417_09590		-1.4	-4.0	membrane protein
PS417_18395		-1.4	-2.7	D-ribose ABC transporter, permease component RbsC (from data)
PS417_20985		-1.4	-1.3	porin
PS417_07170		-1.3	-3.1	hypothetical protein
PS417_06245		-1.3	-1.3	zinc metallopeptidase RseP
PS417_04595		-1.3	-2.4	cell division protein MraZ
PS417_15095		-1.3	-3.8	hypothetical protein
PS417_02560		-1.3	-2.3	23S rRNA methyltransferase
PS417_23375		-1.2	-2.4	cytochrome C oxidase
PS417_22520		-1.2	-1.4	histidine kinase
PS417_21360		-1.2	-1.3	termination factor Rho
PS417_28225		-1.1	-1.5	hypothetical protein
PS417_14980		-1.1	-1.1	universal stress protein UspA
PS417_00045		-1.1	-1.8	glycerol acyltransferase
PS417_21015		-1.1	-2.2	EstX protein
PS417_09245		-1.1	-1.7	recombinase RdgC
PS417_22450		-1.1	-1.1	ATP-dependent DNA helicase RuvA
PS417_18310		-1.1	-1.1	hypothetical protein
PS417_23205		-1.1	-2.3	transcriptional regulator
PS417_17215		-1.1	-1.6	peptidylprolyl isomerase
PS417_04385		-1.1	-2.5	organic solvent ABC transporter substrate-binding protein
PS417_07710		-1.0	-3.7	membrane protein
PS417_24705		-1.0	-2.2	D-alanyl-D-alanine carboxypeptidase
PS417_05560		-1.0	-1.7	ABC transporter
PS417_19955		-1.0	-1.3	hypothetical protein
PS417_18425		-1.0	-1.6	sporulation protein
PS417_02485		-1.0	-3.6	tRNA delta(2)-isopentenylpyrophosphate transferase
PS417_27795		-0.9	-0.7	orotate phosphoribosyltransferase
PS417_24155		-0.9	-1.0	ATP-binding protein
PS417_07165		-0.9	-2.9	dihydrodipicolinate synthase
PS417_23775		-0.9	-1.4	exodeoxyribonuclease V subunit beta
PS417_06370		-0.9	-1.5	cold-shock protein
PS417_23770		-0.9	-1.0	exodeoxyribonuclease V subunit alpha
PS417_04390		-0.9	-2.4	toluene tolerance protein
PS417_23475		-0.9	-1.5	hypothetical protein
PS417_03560		-0.9	-1.4	GTP-binding protein
PS417_26060		-0.9	-2.1	DNA polymerase III subunit epsilon
PS417_10405		-0.9	-1.2	filamentous hemagglutinin
PS417_12935		-0.9	-1.7	RNA polymerase sigma factor
PS417_04915		-0.9	-1.7	glutamine ABC transporter ATP-binding protein
PS417_15305		-0.9	-1.9	type VI secretion protein
PS417_15100		-0.9	-2.1	BatB protein
PS417_05160		-0.9	-0.9	DNA polymerase III subunit chi
PS417_10715		-0.9	-2.2	Cro/Cl family transcriptional regulator
PS417_21480		-0.9	-1.3	23S rRNA pseudouridylate synthase
PS417_20160		-0.8	-1.9	cysteine synthase
PS417_22300		-0.8	-1.4	LTXXQ domain protein
PS417_01030		-0.8	-1.4	glutamine ABC transporter substrate-binding protein
PS417_15110		-0.8	-3.2	protein BatD
PS417_01605		-0.8	-0.9	phosphoglycerate mutase
PS417_04590		-0.8	-3.0	methyltransferase
PS417_27195		-0.8	-1.0	N-acetylglutamate synthase
PS417_14075		-0.8	-1.6	hypothetical protein
PS417_22375		-0.8	-0.8	cold-shock protein
PS417_08335		-0.8	-1.3	hypothetical protein
PS417_04375		-0.8	-1.3	ABC transporter ATP-binding protein
PS417_11485		-0.8	-2.0	AraC family transcriptional regulator
PS417_02280		-0.8	-0.9	GlcNAc-PI de-N-acetylase
PS417_03465		-0.8	-1.4	type III secretion protein
PS417_00380		-0.8	-1.6	zinc ABC transporter ATP-binding protein
PS417_17835		-0.8	-1.9	2-hydroxyhepta-2,4-diene-1,7-dioate isomerase
PS417_07820		-0.8	-2.1	transposase
PS417_28080		-0.7	-5.7	phosphate ABC transporter permease
PS417_04585		-0.7	-0.9	hypothetical protein
PS417_11060		-0.7	-2.7	transporter
PS417_21425		-0.7	-0.9	4-amino-4-deoxychorismate lyase
PS417_28265		-0.7	-1.6	pyridoxamine kinase
PS417_14065		-0.7	-3.1	UTP--glucose-1-phosphate uridylyltransferase
PS417_02225		-0.7	-1.3	bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase
PS417_07700		-0.7	-1.9	chromosome partitioning protein ParA
PS417_28515		-0.7	-1.7	16S rRNA methyltransferase
PS417_05045		-0.7	-2.5	acetamidase
PS417_12220		-0.7	-3.1	hydroxyacylglutathione hydrolase
PS417_13245		-0.7	-2.5	saccharopine dehydrogenase
PS417_02805		-0.7	-0.9	urease subunit gamma
PS417_27935		-0.7	-0.9	type VI secretion protein
PS417_22795		-0.7	-1.1	exclusion suppressor FxsA
PS417_26730		-0.7	-0.3	pyrroline-5-carboxylate reductase
PS417_24370		-0.7	-0.7	(2Fe-2S)-binding protein
PS417_13640		-0.7	-1.4	ribose ABC transporter permease
PS417_25985		-0.7	-1.4	dethiobiotin synthetase
PS417_02160		-0.7	-0.9	hypothetical protein
PS417_02845		-0.7	-2.1	ABC transporter permease
PS417_18235		-0.7	-2.2	nitrile hydratase
PS417_18360		-0.7	-1.5	hypothetical protein
PS417_27110		-0.7	-1.9	spermidine/putrescine ABC transporter permease
PS417_10655		-0.7	-2.1	LuxR family transcriptional regulator
PS417_12930		-0.7	-2.4	LpxA family transferase
PS417_14240		-0.7	-2.1	isochorismatase
PS417_20485		-0.7	-2.1	hypothetical protein
PS417_10120		-0.6	-1.9	hypothetical protein
PS417_27815		-0.6	-0.9	hypothetical protein
PS417_23820		-0.6	-2.5	hypothetical protein
PS417_26815		-0.6	-1.4	peptidase M16
PS417_27315		-0.6	-1.1	hypothetical protein
PS417_15915		-0.6	-1.0	hypothetical protein
PS417_06680		-0.6	-3.4	nuclease PIN
PS417_28070		-0.6	-4.0	phosphate ABC transporter ATP-binding protein
PS417_14245		-0.6	-1.4	hypothetical protein
PS417_20500		-0.6	-2.8	hypothetical protein
PS417_24125		-0.6	-1.9	hypothetical protein
PS417_19350		-0.6	-2.1	GTP cyclohydrolase
PS417_07565		-0.6	-1.7	hypothetical protein
PS417_05325		-0.6	-1.2	fimbrial protein
PS417_18420		-0.6	-2.0	deoxyribonuclease
PS417_24135		-0.6	-1.5	hypothetical protein
PS417_07870		-0.6	-1.2	hypothetical protein
PS417_07455		-0.6	-0.9	glutamine amidotransferase
PS417_12260		-0.6	-2.0	hypothetical protein
PS417_26225		-0.6	-1.7	electron transfer flavoprotein subunit beta
PS417_13075		-0.6	-1.1	hypothetical protein
PS417_20855		-0.6	-0.6	hypothetical protein
PS417_03300		-0.6	-1.2	alanine acetyltransferase
PS417_20930		-0.6	-3.3	50S rRNA methyltransferase
PS417_23370		-0.6	-2.6	protoheme IX farnesyltransferase
PS417_23170		-0.6	-1.4	FeS assembly protein IscX
PS417_04905		-0.6	-2.6	amino acid ABC transporter permease
PS417_11865		-0.6	-1.5	xylose isomerase
PS417_26420		-0.6	-1.2	hypothetical protein
PS417_02475		-0.6	-1.2	N-acetylmuramoyl-L-alanine amidase
PS417_09585		-0.6	-3.0	acetyltransferase
PS417_21760		-0.6	-1.0	hypothetical protein
PS417_25315		-0.6	-2.1	membrane protein
PS417_24225		-0.6	-1.4	hypothetical protein
PS417_26605		-0.6	-0.5	malonate decarboxylase subunit beta
PS417_07140		-0.6	-1.7	peptidase M48
PS417_22315		-0.6	-2.0	DNA-3-methyladenine glycosylase
PS417_09330		-0.6	-1.5	NAD(P)H-quinone oxidoreductase
PS417_05820		-0.6	-1.5	recombinase RecX
PS417_10425		-0.6	-1.2	hypothetical protein
PS417_20785		-0.6	-1.6	transcriptional regulator
PS417_14165		-0.6	-2.2	ArsR family transcriptional regulator
PS417_18545		-0.6	-1.8	cell division protein
PS417_09210		-0.5	-0.6	TetR family transcriptional regulator
PS417_24710		-0.5	-2.8	lipoprotein
PS417_27510		-0.5	-2.6	disulfide bond formation protein B
PS417_18055		-0.5	-0.8	general secretion pathway protein GspK
PS417_11615		-0.5	-1.1	urea ABC transporter ATP-binding protein
PS417_12845		-0.5	-1.3	NAD(P)H dehydrogenase
PS417_23250		-0.5	-2.6	S-adenosylmethionine tRNA ribosyltransferase
PS417_16395		-0.5	-1.6	arsenate reductase
PS417_27075		-0.5	-1.4	thiol-disulfide isomerase
PS417_26695		-0.5	-0.9	uracil phosphoribosyltransferase
PS417_12455		-0.5	-0.9	hydrolase
PS417_05545		-0.5	-1.7	amino acid ABC transporter ATP-binding protein
PS417_19505		-0.5	-1.0	2,4-diaminobutyrate 4-aminotransferase
PS417_26985		-0.5	-1.9	phosphoenolpyruvate-protein phosphotransferase
PS417_14140		-0.5	-0.9	membrane protein
PS417_23105		-0.5	-0.7	hypothetical protein
PS417_19135		-0.5	-1.0	DeoR faimly transcriptional regulator
PS417_11710		-0.5	-1.7	N(5)-hydroxyornithine transformylase PvdF
PS417_12405		-0.5	-1.1	DNA-binding protein
PS417_06025		-0.5	-1.4	alpha/beta hydrolase
PS417_06175		-0.5	-1.9	cysteine sulfinate desulfinase
PS417_23095		-0.5	-0.7	exodeoxyribonuclease
PS417_15860		-0.5	-2.8	chromate transporter
PS417_17320		-0.5	-1.5	phenylhydantoinase
PS417_13670		-0.5	-2.4	protease
PS417_15135		-0.5	-0.9	hypothetical protein
PS417_15030		-0.5	-0.8	short-chain dehydrogenase
PS417_17035		-0.5	-0.8	Cro/Cl family transcriptional regulator
PS417_07985		-0.5	-0.9	AbrB family transcriptional regulator
PS417_17450		-0.5	-1.5	amino acid ABC transporter substrate-binding protein
PS417_10720		-0.5	-2.2	chemotaxis protein CheY
PS417_20185		-0.5	-1.6	ketosteroid isomerase
PS417_14650		-0.5	-1.6	chemotaxis protein
PS417_02995		-0.5	-1.8	NUDIX hydrolase
PS417_17160		-0.5	-0.8	1-aminocyclopropane-1-carboxylate deaminase
PS417_23545		-0.5	-1.3	gamma-glutamyl kinase
PS417_22380		-0.5	-1.8	hypothetical protein
PS417_13795		-0.5	-2.4	UDP-4-amino-4-deoxy-L-arabinose formyltransferase
PS417_18150		-0.5	-2.1	chemotaxis protein CheY
PS417_18860		-0.5	-2.0	transcriptional regulator
PS417_00900		-0.5	-1.4	4-aminobutyrate aminotransferase
PS417_18225		-0.5	-2.6	phenol degradation protein meta
PS417_11510		-0.5	-0.9	AraC family transcriptional regulator
PS417_13885		-0.5	-1.4	chemotaxis protein CheY
PS417_18105		-0.5	-0.9	iron-dicitrate transporter substrate-binding subunit
PS417_01140		-0.5	-1.7	taurine ABC transporter permease
PS417_17405		-0.5	-1.0	AraC family transcriptional regulator
PS417_12515		-0.5	-1.0	lactate dehydrogenase
PS417_06960		-0.5	-1.6	membrane protein

Specific Phenotypes

None in this experiment

For Pseudomonas simiae WCS417 in r2a control experiments