Experiment set18IT039 for Pseudomonas putida KT2440

Compare to:

Growth at 25C

200 most important genes:

  gene name fitness t score description  
PP_1079 -7.1 -4.9 Ornithine carbamoyltransferase compare
PP_4680 -7.1 -4.9 acetohydroxybutanoate synthase / acetolactate synthase compare
PP_0293 -6.7 -2.4 Imidazole glycerol phosphate synthase subunit HisF compare
PP_1985 -6.6 -4.1 3-isopropylmalate dehydratase large subunit compare
PP_0290 -6.6 -4.6 Imidazole glycerol phosphate synthase subunit HisH compare
PP_0789 -6.4 -3.9 N-acetyl-anhydromuramyl-L-alanine-amidase compare
PP_5253 -6.3 -2.9 Arylesterase compare
PP_0082 -6.0 -4.2 tryptophan synthase alpha chain compare
PP_0083 -5.9 -4.1 tryptophan synthase beta chain compare
PP_2999 -5.8 -1.2 Glyoxalase family protein compare
PP_0289 -5.8 -9.6 Imidazoleglycerol-phosphate dehydratase compare
PP_4678 -5.8 -15.1 Ketol-acid reductoisomerase compare
PP_2168 -5.7 -11.4 Transaldolase compare
PP_1988 -5.4 -7.8 3-isopropylmalate dehydrogenase compare
PP_1995 -5.3 -9.1 N-(5'-phosphoribosyl)anthranilate isomerase compare
PP_5097 -5.3 -12.8 homoserine O-acetyltransferase compare
PP_0566 -5.3 -1.1 translation-related factor compare
PP_3378 -5.3 -1.6 putative 2-ketogluconokinase compare
PP_5347 -5.0 -11.6 pyruvate carboxylase subunit A compare
PP_0967 -5.0 -8.0 histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) compare
PP_5014 -5.0 -2.9 Phosphoribosyl-AMP cyclohydrolase compare
PP_3417 -4.9 -5.2 D-gluconate transporter compare
PP_4696 -4.9 -3.4 Nitrogen regulation protein NR(I) compare
PP_4679 -4.7 -6.9 acetohydroxybutanoate synthase / acetolactate synthase compare
PP_4909 -4.7 -7.2 phosphoserine phosphatase compare
PP_5098 -4.6 -6.6 methionine biosynthesis protein MetW compare
PP_0001 -4.4 -1.8 probable chromosome-partitioning protein compare
PP_1654 -4.3 -3.0 cysteine synthase B compare
PP_4902 -4.3 -2.5 Oligoribonuclease compare
PP_4268 -4.3 -1.3 nucleoid-associated broad specificity regulator compare
PP_5267 -4.2 -2.5 putative cytochrome c5 compare
PP_1824 -4.2 -1.2 Smr domain protein compare
PP_1362 -4.1 -4.8 pyruvate kinase II compare
PP_0364 -4.0 -5.1 pimeloyl-[acp] methyl ester esterase compare
PP_1366 -4.0 -1.2 Transcriptional regulator MvaT, P16 subunit compare
PP_2145 -4.0 -2.4 beta-N-acetylglucosaminidase compare
PP_5240 -3.9 -3.4 Response regulator compare
PP_1231 -3.8 -5.2 quinolinate synthase [4Fe-4S] cluster subunit compare
PP_0422 -3.8 -3.4 Indole-3-glycerol phosphate synthase compare
PP_3999 -3.7 -8.7 Uroporphyrinogen-III C-methyltransferase/Precorrin-2 dehydrogenase/Sirohydrochlorin ferrochelatase compare
PP_5001 -3.7 -3.1 protease HslVU, ATPase component compare
PP_1025 -3.7 -8.5 2-isopropylmalate synthase compare
PP_2371 -3.6 -4.2 Sulphite reductase hemoprotein, beta subunit compare
PP_0420 -3.6 -6.6 aminodeoxychorismate synthase / para-aminobenzoate synthase multi-enzyme complex compare
PP_1764 -3.6 -3.7 Phosphoglycolate phosphatase 2 compare
PP_4480 -3.5 -7.7 arginine N-succinyltransferase, subunit alpha compare
PP_5155 -3.4 -2.6 D-3-phosphoglycerate dehydrogenase / alpha-ketoglutarate reductase compare
PP_2847 -3.4 -1.4 Urease accessory protein UreJ compare
PP_0966 -3.2 -5.5 Histidinol dehydrogenase compare
PP_4874 -3.1 -1.3 50S ribosomal protein L9 compare
PP_1097 -3.1 -0.9 Methionine--tRNA ligase compare
PP_3511 -3.1 -4.2 Branched-chain-amino-acid aminotransferase compare
PP_3460 -3.0 -2.1 quinohemoprotein amine dehydrogenase, gamma subunit compare
PP_4984 -3.0 -4.6 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase compare
PP_1218 -2.9 -3.4 putative acyl-CoA thioesterase compare
PP_5346 -2.9 -4.2 pyruvate carboxylase subunit B compare
PP_2378 -2.8 -3.2 Fe/S biogenesis protein NfuA compare
PP_0184 -2.7 -3.7 Argininosuccinate lyase compare
PP_0888 -2.7 -2.3 Photosynthetic apparatus regulatory protein RegA compare
PP_0362 -2.6 -6.2 Biotin synthase compare
PP_3908 -2.6 -2.2 conserved protein of unknown function compare
PP_0365 -2.6 -5.3 Malonyl-[acyl-carrier protein] O-methyltransferase compare
PP_0593 -2.6 -0.9 putative ribosome-binding factor compare
PP_5128 -2.6 -4.3 Dihydroxy-acid dehydratase compare
PP_1122 -2.6 -1.5 OmpA family protein compare
PP_1048 -2.6 -1.6 putative protein secretion protein for export compare
PP_2416 -2.6 -1.4 putative Iron ABC transporter, ATP-binding protein compare
PP_5350 -2.6 -3.5 Transcriptional regulator, RpiR family compare
PP_5348 -2.5 -3.8 Transcriptional regulator, LysR family compare
PP_5289 -2.5 -2.6 Acetylglutamate kinase compare
PP_4700 -2.5 -1.7 pantothenate synthetase compare
PP_5095 -2.5 -1.0 pyrroline-5-carboxylate reductase compare
PP_1303 -2.5 -5.3 Sulfate adenylyltransferase subunit 2 compare
PP_5176 -2.5 -1.6 conserved protein of unknown function compare
PP_0893 -2.4 -1.6 ThiJ/PfpI family protein compare
PP_5028 -2.4 -3.9 proline iminopeptidase compare
PP_5185 -2.4 -3.2 acetylglutamate kinase-like protein (regulatory domain)/amino acid N-acetyltransferase compare
PP_1088 -2.4 -5.0 Argininosuccinate synthase compare
PP_0434 -2.3 -3.3 Anhydro-N-acetylmuramic acid kinase compare
PP_3637 -2.3 -1.2 putative Sulfonate ABC transporter, ATP-binding protein compare
PP_4504 -2.3 -1.4 conserved exported protein of unknown function compare
PP_1679 -2.3 -2.2 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase compare
PP_0292 -2.3 -1.5 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
PP_5015 -2.3 -2.9 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
PP_t11 -2.2 -2.0 tRNA-Lys compare
PP_1233 -2.2 -2.5 sulfurtransferase compare
PP_4964 -2.2 -3.7 D-erythrose 4-phosphate dehydrogenase compare
PP_5580 -2.2 -1.2 protein of unknown function compare
PP_1381 -2.2 -1.1 4-carboxymuconolactone decarboxylase compare
PP_5598 -2.2 -1.5 conserved protein of unknown function compare
PP_2001 -2.1 -3.5 O-succinylhomoserine sulfhydrylase compare
PP_1664 -2.1 -3.4 phosphoribosylglycinamide formyltransferase 1 compare
PP_0393 -2.1 -1.4 putative 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase compare
PP_0417 -2.0 -6.5 Anthranilate synthase component 1 compare
PP_5217 -2.0 -5.0 Polyphosphate kinase compare
PP_3919 -2.0 -2.1 conserved protein of unknown function compare
PP_3899 -2.0 -1.5 conserved protein of unknown function, hicB family compare
PP_4223 -2.0 -1.8 diaminobutyrate-2-oxoglutarate transaminase compare
PP_4120 -1.9 -3.1 NADH-quinone oxidoreductase subunit B compare
PP_0291 -1.9 -1.8 conserved protein of unknown function compare
PP_0366 -1.9 -3.8 dethiobiotin synthetase compare
PP_5528 -1.9 -1.2 conserved protein of unknown function compare
PP_2820 -1.9 -2.2 HTH-type transcriptional regulator nfxB compare
PP_0960 -1.8 -2.3 phospholipid ABC transporter binding protein compare
PP_4379 -1.8 -2.5 Beta-ketoacyl-acyl-carrier-protein synthase I compare
PP_4099 -1.8 -16.2 two-componenent system BarA/UvrY - regulatory subunit compare
PP_4238 -1.8 -1.8 conserved protein of unknown function compare
PP_5303 -1.8 -2.3 aminoacrylate/iminopropionate hydrolase/deaminase compare
PP_2370 -1.8 -1.5 conserved protein of unknown function compare
PP_1986 -1.8 -1.7 3-isopropylmalate dehydratase small subunit compare
PP_2474 -1.8 -1.5 Glutathione S-transferase family protein compare
PP_1548 -1.8 -1.6 conserved protein of unknown function compare
PP_5471 -1.8 -1.4 putative response regulator receiver protein compare
PP_1650 -1.7 -14.7 Sensor protein GacS compare
PP_0989 -1.7 -1.3 glycine cleavage system H protein 1 compare
PP_4126 -1.7 -1.4 NADH-quinone oxidoreductase subunit I compare
PP_5320 -1.7 -2.6 two-component system DNA-binding transcriptional dual response regulator PhoB compare
PP_2328 -1.7 -2.7 Phosphoadenosine phosphosulfate reductase compare
PP_4699 -1.7 -2.5 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
PP_0719 -1.7 -0.9 ribosome-associated potassium-dependent informational ATP/GTPase compare
PP_5100 -1.7 -1.0 dITP/XTP pyrophosphatase compare
PP_5321 -1.7 -2.5 two-component system sensory histidine kinase compare
PP_0363 -1.7 -4.1 8-amino-7-oxononanoate synthase compare
PP_0833 -1.7 -1.0 queuine tRNA-ribosyltransferase compare
PP_0421 -1.7 -2.9 Anthranilate phosphoribosyltransferase compare
PP_4546 -1.7 -3.5 ATP-dependent helicase HrpA compare
PP_4479 -1.6 -2.5 arginine N-succinyltransferase, subunit beta compare
PP_0735 -1.6 -1.2 molybdopterin-synthase adenylyltransferase compare
PP_3892 -1.6 -0.9 conserved protein of unknown function compare
PP_0235 -1.6 -2.2 Peroxidase compare
PP_1935 -1.6 -1.1 Transcriptional regulator, Cro/CI family compare
PP_0585 -1.5 -1.0 putative metal-sensitive transcriptional regulator, MerR family compare
PP_3883 -1.5 -1.1 putative Phage holin compare
PP_1022 -1.5 -3.7 glucose 6-phosphate-1-dehydrogenase compare
PP_4785 -1.5 -4.0 conserved exported protein of unknown function compare
PP_5338 -1.5 -1.6 aspartate ammonia-lyase compare
PP_3519 -1.5 -0.8 putative Lipoprotein compare
PP_2475 -1.5 -2.4 Transcriptional regulator, TetR family compare
PP_4156 -1.5 -1.6 Transcriptional regulator, LysR family compare
PP_5331 -1.5 -1.3 Long-chain acyl-CoA thioester hydrolase compare
PP_0965 -1.5 -3.8 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
PP_5534 -1.5 -2.0 protein of unknown function compare
PP_2388 -1.5 -1.7 Transporter, LysE family compare
PP_2442 -1.5 -1.2 conserved protein of unknown function, DUF480 family compare
PP_1783 -1.5 -1.7 dTDP-glucose pyrophosphorylase compare
PP_1906 -1.5 -1.5 ribosomal large subunit pseudouridine synthase C compare
PP_2327 -1.4 -2.4 transcriptional dual regulator / CysB-O-acetyl-L-serine compare
PP_3901 -1.4 -2.0 conserved protein of unknown function compare
PP_2256 -1.4 -2.2 Transcriptional regulator, Cro/CI family compare
PP_2848 -1.4 -1.7 urease accessory protein compare
PP_1683 -1.4 -1.6 Transcriptional regulator, MarR family compare
PP_5203 -1.4 -2.6 5-formyltetrahydrofolate cyclo-ligase compare
PP_5617 -1.4 -1.0 conserved protein of unknown function compare
PP_4122 -1.4 -1.3 proton-pumping NADH:ubiquinone oxidoreductase, respiratory complex I, subunit E compare
PP_4139 -1.4 -2.4 conserved protein of unknown function compare
PP_5639 -1.4 -4.5 conserved exported protein of unknown function compare
PP_4835 -1.4 -1.4 conserved exported protein of unknown function compare
PP_5473 -1.4 -1.0 putative transcriptional regulator, LuxR family compare
PP_1637 -1.4 -2.3 Transcriptional regulator, LysR family compare
PP_2759 -1.4 -2.0 ribose ABC transporter - ATP-binding subunit compare
PP_0405 -1.4 -3.6 conserved protein of unknown function compare
PP_4895 -1.4 -2.3 tRNA dimethylallyltransferase compare
PP_0122 -1.3 -1.2 conserved exported protein of unknown function compare
PP_5104 -1.3 -3.2 thiazole synthase compare
PP_4263 -1.3 -1.9 putative membrane-bounded cytochrome biogenesis cycZ-like domain, copper tolerance protein compare
PP_1912 -1.3 -1.9 Phosphate acyltransferase compare
PP_4556 -1.3 -2.1 conserved protein of unknown function compare
PP_1917 -1.3 -2.5 4-amino-4-deoxychorismate lyase compare
PP_5610 -1.3 -1.1 protein of unknown function compare
PP_5393 -1.3 -1.0 putative metal-binding chaperone compare
PP_4695 -1.3 -4.3 Sensory box histidine kinase compare
PP_0231 -1.3 -2.0 taurine ABC transporter permease subunit compare
PP_0679 -1.3 -1.9 conserved exported protein of unknown function compare
PP_4130 -1.3 -2.4 NADH:ubiquinone oxidoreductase, membrane subunit M compare
PP_3376 -1.3 -2.4 putative phosphonate dehydrogenase compare
PP_2231 -1.3 -2.6 putative permease of the drug/metabolite transporter (DMT) superfamily compare
PP_1099 -1.3 -0.7 Cold shock protein CapB compare
PP_4782 -1.3 -2.0 Phosphomethylpyrimidine kinase compare
PP_0673 -1.2 -1.1 conserved protein of unknown function compare
PP_4787 -1.2 -1.5 putative protein with nucleoside triphosphate hydrolase domain compare
PP_5025 -1.2 -3.6 Glucans biosynthesis glucosyltransferase H compare
PP_3365 -1.2 -0.7 Acetolactate synthase compare
PP_4581 -1.2 -0.7 putative amidotransferase compare
PP_1293 -1.2 -1.0 molybdopterin synthase small subunit compare
PP_1367 -1.2 -2.5 formyltetrahydrofolate hydrolase compare
PP_3295 -1.2 -1.6 YeeE/YedE family protein compare
PP_4907 -1.2 -1.7 Thiosulfate sulfurtransferase compare
PP_4966 -1.2 -1.3 transcriptional regulator of methionine metabolism compare
PP_1001 -1.2 -1.8 arginine deiminase compare
PP_0377 -1.2 -1.3 coenzyme PQQ synthesis protein D compare
PP_4054 -1.2 -1.4 conserved protein of unknown function compare
PP_5322 -1.2 -2.3 putative metal ion transporter compare
PP_4828 -1.2 -0.6 Precorrin-8X methylmutase compare
PP_1011 -1.2 -3.1 glucokinase compare
PP_3770 -1.2 -1.7 conserved protein of unknown function compare
PP_3043 -1.2 -1.2 conserved protein of unknown function compare
PP_4824 -1.2 -3.1 Sensor histidine kinase/response regulator compare
PP_1734 -1.2 -1.9 Probable septum site-determining protein MinC compare
PP_3938 -1.2 -1.1 conserved protein of unknown function compare
PP_3034 -1.2 -1.1 putative Regulator protein compare


Specific Phenotypes

For 5 genes in this experiment

For temperature D-Glucose in Pseudomonas putida KT2440

For temperature D-Glucose across organisms