Experiment set18IT037 for Pseudomonas putida KT2440

Compare to:

Growth at 25C

200 most important genes:

  gene name fitness t score description  
PP_1079 -7.3 -5.1 Ornithine carbamoyltransferase compare
PP_0293 -6.8 -2.7 Imidazole glycerol phosphate synthase subunit HisF compare
PP_1985 -6.8 -4.6 3-isopropylmalate dehydratase large subunit compare
PP_2371 -6.3 -4.4 Sulphite reductase hemoprotein, beta subunit compare
PP_0083 -6.0 -4.2 tryptophan synthase beta chain compare
PP_0967 -5.8 -10.5 histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) compare
PP_0653 -5.7 -1.3 conserved protein of unknown function compare
PP_0048 -5.5 -1.2 conserved protein of unknown function compare
PP_5453 -5.4 -2.0 conserved protein of unknown function compare
PP_5347 -5.2 -12.2 pyruvate carboxylase subunit A compare
PP_0082 -5.2 -8.1 tryptophan synthase alpha chain compare
PP_3511 -5.1 -8.0 Branched-chain-amino-acid aminotransferase compare
PP_0022 -5.1 -1.2 hypothetical protein compare
PP_0290 -4.7 -7.3 Imidazole glycerol phosphate synthase subunit HisH compare
PP_0422 -4.5 -4.4 Indole-3-glycerol phosphate synthase compare
PP_0292 -4.5 -3.9 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
PP_3999 -4.3 -10.4 Uroporphyrinogen-III C-methyltransferase/Precorrin-2 dehydrogenase/Sirohydrochlorin ferrochelatase compare
PP_1988 -4.3 -5.9 3-isopropylmalate dehydrogenase compare
PP_4828 -4.2 -1.3 Precorrin-8X methylmutase compare
PP_4122 -4.2 -2.1 proton-pumping NADH:ubiquinone oxidoreductase, respiratory complex I, subunit E compare
PP_4680 -4.1 -10.6 acetohydroxybutanoate synthase / acetolactate synthase compare
PP_5014 -4.1 -4.1 Phosphoribosyl-AMP cyclohydrolase compare
PP_0289 -4.1 -5.5 Imidazoleglycerol-phosphate dehydratase compare
PP_5097 -4.1 -8.8 homoserine O-acetyltransferase compare
PP_5348 -4.0 -5.9 Transcriptional regulator, LysR family compare
PP_4678 -4.0 -9.8 Ketol-acid reductoisomerase compare
PP_5185 -3.9 -4.9 acetylglutamate kinase-like protein (regulatory domain)/amino acid N-acetyltransferase compare
PP_2378 -3.9 -2.7 Fe/S biogenesis protein NfuA compare
PP_2168 -3.9 -8.0 Transaldolase compare
PP_2001 -3.8 -5.5 O-succinylhomoserine sulfhydrylase compare
PP_5289 -3.7 -4.0 Acetylglutamate kinase compare
PP_5346 -3.6 -6.1 pyruvate carboxylase subunit B compare
PP_4679 -3.6 -5.2 acetohydroxybutanoate synthase / acetolactate synthase compare
PP_5128 -3.5 -6.2 Dihydroxy-acid dehydratase compare
PP_4701 -3.5 -1.1 glucose-6-phosphate isomerase compare
PP_4909 -3.5 -6.8 phosphoserine phosphatase compare
PP_1995 -3.5 -7.8 N-(5'-phosphoribosyl)anthranilate isomerase compare
PP_5098 -3.3 -5.1 methionine biosynthesis protein MetW compare
PP_4136 -3.3 -1.0 Transcriptional regulator, LuxR family compare
PP_0846 -3.2 -1.5 DnaK-like molecular chaperone specific for IscU compare
PP_0966 -3.0 -5.5 Histidinol dehydrogenase compare
PP_1664 -3.0 -2.1 phosphoribosylglycinamide formyltransferase 1 compare
PP_4696 -3.0 -5.0 Nitrogen regulation protein NR(I) compare
PP_1344 -3.0 -2.4 conserved protein of unknown function compare
PP_3824 -2.9 -2.3 conserved exported protein of unknown function compare
PP_4424 -2.9 -1.9 Uncharacterized HTH-type transcriptional regulator y4tD compare
PP_1428 -2.9 -1.6 Sigma factor AlgU negative regulatory protein compare
PP_2370 -2.9 -2.7 conserved protein of unknown function compare
PP_0362 -2.8 -6.7 Biotin synthase compare
PP_1912 -2.8 -5.3 Phosphate acyltransferase compare
PP_4561 -2.7 -1.0 stress response protein compare
PP_5095 -2.7 -1.2 pyrroline-5-carboxylate reductase compare
PP_4785 -2.7 -5.1 conserved exported protein of unknown function compare
PP_0365 -2.7 -5.6 Malonyl-[acyl-carrier protein] O-methyltransferase compare
PP_1088 -2.6 -6.2 Argininosuccinate synthase compare
PP_0364 -2.6 -4.3 pimeloyl-[acp] methyl ester esterase compare
PP_1025 -2.5 -6.8 2-isopropylmalate synthase compare
PP_5015 -2.5 -3.3 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
PP_0434 -2.5 -3.8 Anhydro-N-acetylmuramic acid kinase compare
PP_0406 -2.5 -2.7 Nucleotidyltransferase family protein compare
PP_3637 -2.5 -1.4 putative Sulfonate ABC transporter, ATP-binding protein compare
PP_0421 -2.5 -4.2 Anthranilate phosphoribosyltransferase compare
PP_1233 -2.5 -3.6 sulfurtransferase compare
PP_0184 -2.4 -4.3 Argininosuccinate lyase compare
PP_3649 -2.4 -3.4 Transcriptional regulator, GntR family compare
PP_1986 -2.3 -2.1 3-isopropylmalate dehydratase small subunit compare
PP_4787 -2.2 -1.9 putative protein with nucleoside triphosphate hydrolase domain compare
PP_0393 -2.2 -1.5 putative 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase compare
PP_5000 -2.2 -1.5 peptidase component of the ATP-dependent HslVU protease compare
PP_4902 -2.2 -2.1 Oligoribonuclease compare
PP_2327 -2.2 -3.7 transcriptional dual regulator / CysB-O-acetyl-L-serine compare
PP_0735 -2.1 -1.6 molybdopterin-synthase adenylyltransferase compare
PP_1788 -2.1 -2.4 conserved protein of unknown function compare
PP_4700 -2.1 -3.2 pantothenate synthetase compare
PP_2328 -2.1 -3.7 Phosphoadenosine phosphosulfate reductase compare
PP_4984 -2.1 -4.6 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase compare
PP_1231 -2.0 -2.8 quinolinate synthase [4Fe-4S] cluster subunit compare
PP_0775 -2.0 -2.1 conserved protein of unknown function compare
PP_2002 -2.0 -2.3 putative enzyme compare
PP_0787 -2.0 -1.7 quinolinate phosphoribosyltransferase (decarboxylating) monomer compare
PP_5017 -2.0 -1.1 Sec-independent protein translocase protein TatB compare
PP_3105 -2.0 -2.2 conserved membrane protein of unknown function compare
PP_5303 -2.0 -2.4 aminoacrylate/iminopropionate hydrolase/deaminase compare
PP_5216 -2.0 -1.1 exopolyphosphatase compare
PP_0593 -2.0 -1.0 putative ribosome-binding factor compare
PP_2145 -1.9 -2.3 beta-N-acetylglucosaminidase compare
PP_5104 -1.9 -3.8 thiazole synthase compare
PP_3946 -1.9 -1.3 HTH-type transcriptional repressor NicR compare
PP_1310 -1.9 -1.7 conserved hypothetical protein compare
PP_3318 -1.9 -1.5 conserved protein of unknown function compare
PP_4129 -1.9 -3.5 NADH:ubiquinone oxidoreductase, membrane subunit L compare
PP_0363 -1.8 -4.6 8-amino-7-oxononanoate synthase compare
PP_t29 -1.8 -1.1 tRNA-Ala compare
PP_2857 -1.8 -1.7 conserved exported protein of unknown function compare
PP_0719 -1.8 -1.0 ribosome-associated potassium-dependent informational ATP/GTPase compare
PP_0833 -1.8 -1.1 queuine tRNA-ribosyltransferase compare
PP_0630 -1.8 -1.0 DNA gyrase inhibitor YacG compare
PP_4726 -1.8 -1.9 Chaperone protein DnaJ compare
PP_4546 -1.8 -4.3 ATP-dependent helicase HrpA compare
PP_0420 -1.8 -4.9 aminodeoxychorismate synthase / para-aminobenzoate synthase multi-enzyme complex compare
PP_0512 -1.8 -1.5 hypothetical protein compare
PP_0240 -1.7 -1.5 Aliphatic sulfonates import ATP-binding protein SsuB compare
PP_4480 -1.7 -4.9 arginine N-succinyltransferase, subunit alpha compare
PP_0065 -1.7 -2.2 NAD-binding component of TrK potassium transporter compare
PP_1303 -1.7 -3.2 Sulfate adenylyltransferase subunit 2 compare
PP_1650 -1.7 -12.2 Sensor protein GacS compare
PP_4296 -1.6 -1.2 conserved exported protein of unknown function compare
PP_4993 -1.6 -3.2 Glutathione synthetase compare
PP_0417 -1.6 -7.5 Anthranilate synthase component 1 compare
PP_4793 -1.6 -1.8 conserved protein of unknown function compare
PP_4379 -1.6 -2.3 Beta-ketoacyl-acyl-carrier-protein synthase I compare
PP_4099 -1.6 -14.7 two-componenent system BarA/UvrY - regulatory subunit compare
PP_3035 -1.6 -1.3 conserved protein of unknown function compare
PP_2459 -1.6 -1.0 ribose pyranase compare
PP_1176 -1.6 -1.2 conserved protein of unknown function compare
PP_3098 -1.6 -0.9 conserved protein of unknown function compare
PP_1002 -1.6 -3.1 arginine/ornithine antiporter compare
PP_5155 -1.6 -3.2 D-3-phosphoglycerate dehydrogenase / alpha-ketoglutarate reductase compare
PP_4263 -1.5 -1.7 putative membrane-bounded cytochrome biogenesis cycZ-like domain, copper tolerance protein compare
PP_2231 -1.5 -1.9 putative permease of the drug/metabolite transporter (DMT) superfamily compare
PP_5202 -1.5 -1.1 putative cell division protein compare
PP_4964 -1.5 -2.5 D-erythrose 4-phosphate dehydrogenase compare
PP_1011 -1.5 -4.1 glucokinase compare
PP_2640 -1.5 -1.7 Acetyltransferase, GNAT family compare
PP_4121 -1.5 -3.5 NADH-quinone oxidoreductase subunit C/D compare
PP_1381 -1.5 -1.0 4-carboxymuconolactone decarboxylase compare
PP_2390 -1.5 -4.2 Transcriptional regulator, LysR family compare
PP_5320 -1.4 -3.3 two-component system DNA-binding transcriptional dual response regulator PhoB compare
PP_4159 -1.4 -2.7 Potassium-transporting ATPase C chain compare
PP_0789 -1.4 -4.2 N-acetyl-anhydromuramyl-L-alanine-amidase compare
PP_0366 -1.4 -2.3 dethiobiotin synthetase compare
PP_0405 -1.4 -4.0 conserved protein of unknown function compare
PP_4693 -1.4 -3.5 RNA polymerase-binding transcription factor DksA compare
PP_5217 -1.4 -4.4 Polyphosphate kinase compare
PP_0848 -1.4 -1.1 donor of Fe2+ and regulator of cysteine desulfurase activity compare
PP_4699 -1.4 -2.0 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
PP_5279 -1.4 -1.5 conserved protein of unknown function compare
PP_0380 -1.4 -2.2 Coenzyme PQQ synthesis protein A compare
PP_t10 -1.4 -0.9 tRNA-Pro compare
PP_2809 -1.4 -1.7 conserved membrane protein of unknown function compare
PP_0291 -1.4 -1.1 conserved protein of unknown function compare
PP_1355 -1.3 -3.8 Muropeptide permease AmpG compare
PP_3244 -1.3 -1.4 Magnesium transporter, MgtC family compare
PP_3487 -1.3 -1.3 conserved exported protein of unknown function compare
PP_2442 -1.3 -1.7 conserved protein of unknown function, DUF480 family compare
PP_1362 -1.3 -1.8 pyruvate kinase II compare
PP_2681 -1.3 -1.1 coenzyme PQQ synthesis protein D compare
PP_4126 -1.3 -1.3 NADH-quinone oxidoreductase subunit I compare
PP_0949 -1.3 -2.6 putative ATP-binding protein UPF0042 compare
PP_3198 -1.3 -1.6 Ferredoxin, 2Fe-2S compare
PP_2070 -1.3 -1.1 Transcriptional regulator, AraC family compare
PP_5659 -1.3 -2.4 protein of unknown function compare
PP_5648 -1.3 -1.8 conserved exported protein of unknown function compare
PP_3378 -1.3 -1.1 putative 2-ketogluconokinase compare
PP_5617 -1.3 -1.8 conserved protein of unknown function compare
PP_1589 -1.3 -3.9 uridylyltransferase compare
PP_4098 -1.3 -1.4 UvrABC system protein C compare
PP_4479 -1.3 -1.9 arginine N-succinyltransferase, subunit beta compare
PP_2274 -1.2 -1.2 conserved protein of unknown function compare
PP_2880 -1.2 -1.3 Transcriptional regulator, TetR family compare
PP_5176 -1.2 -0.6 conserved protein of unknown function compare
PP_4532 -1.2 -0.9 ATP-dependent DEAD-box RNA helicase require for 50S ribosomal subunit biogenesis compare
PP_5022 -1.2 -1.3 Glutamine transport ATP-binding protein GlnQ compare
PP_5441 -1.2 -0.9 protein of unknown function compare
PP_2160 -1.2 -1.8 NADPH-dependent 7-cyano-7-deazaguanine reductase compare
PP_5324 -1.2 -1.4 Response regulator compare
PP_1713 -1.2 -1.0 Transcriptional regulator PcaQ compare
PP_5639 -1.2 -4.0 conserved exported protein of unknown function compare
PP_2136 -1.2 -2.1 enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase compare
PP_0628 -1.2 -1.1 conserved protein of unknown function compare
PP_2929 -1.2 -3.2 Carboxynorspermidine/carboxyspermidine decarboxylase compare
PP_5001 -1.1 -2.2 protease HslVU, ATPase component compare
PP_5321 -1.1 -3.0 two-component system sensory histidine kinase compare
PP_2878 -1.1 -1.3 conserved protein of unknown function compare
PP_4199 -1.1 -0.8 putative Lipoprotein compare
PP_1930 -1.1 -2.7 arsenic resistance transcriptional regulator compare
PP_5035 -1.1 -3.4 Histidine utilization repressor compare
PP_4285 -1.1 -2.0 5-hydroxyisourate hydrolase compare
PP_0947 -1.1 -2.6 conserved membrane protein of unknown function compare
PP_1656 -1.1 -3.6 ATP:GTP 3'-pyrophosphotransferase compare
PP_4981 -1.1 -0.8 polyisoprene-binding protein, acidic stress response factor compare
PP_1658 -1.1 -1.8 conserved protein of unknown function compare
PP_5253 -1.1 -1.8 Arylesterase compare
PP_0261 -1.1 -1.7 adenosine-3'(2'),5'-bisphosphate nucleotidase compare
PP_1655 -1.1 -1.8 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD compare
PP_0235 -1.1 -1.5 Peroxidase compare
PP_4273 -1.1 -1.1 Transcriptional regulator, MerR family compare
PP_0962 -1.1 -2.0 toluene-tolerance protein compare
PP_1265 -1.1 -1.9 conserved protein of unknown function compare
PP_0874 -1.1 -0.6 conserved protein of unknown function compare
PP_4642 -1.1 -0.8 Cyclic diguanosine monophosphate-binding protein compare
PP_2387 -1.1 -0.6 conserved protein of unknown function compare
PP_2417 -1.1 -2.1 putative Iron ABC transporter, permease protein compare
PP_5621 -1.1 -1.3 protein of unknown function compare
PP_1736 -1.1 -1.0 conserved protein of unknown function compare
PP_1979 -1.0 -1.1 putative Hydrolase compare
PP_1096 -1.0 -1.3 putative electron transport complex protein compare
PP_0114 -1.0 -2.8 methionine ABC transporter ATP-binding protein compare
PP_5605 -1.0 -2.2 conserved exported protein of unknown function compare
PP_4507 -1.0 -3.4 potassium transporter compare


Specific Phenotypes

For 5 genes in this experiment

For temperature D-Glucose in Pseudomonas putida KT2440

For temperature D-Glucose across organisms