Experiment set18IT027 for Pseudomonas simiae WCS417

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Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic acid monopotassium salt monohydrate; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50

200 most important genes:

  gene name fitness t score description  
PS417_23545 -4.3 -2.7 gamma-glutamyl kinase compare
PS417_05975 -4.2 -1.2 chemotaxis protein CheW compare
PS417_27870 -3.9 -5.5 ATP-dependent DNA helicase RecG compare
PS417_19835 -3.3 -1.6 flagellar biosynthesis protein FliS compare
PS417_16490 -3.1 -1.5 cell division protein FtsK compare
PS417_01915 -3.0 -0.8 ATP-dependent protease ATP-binding subunit HslU compare
PS417_17215 -3.0 -3.9 peptidylprolyl isomerase compare
PS417_23950 -2.9 -2.0 polynucleotide phosphorylase/polyadenylase compare
PS417_24370 -2.9 -1.1 (2Fe-2S)-binding protein compare
PS417_12805 -2.9 -12.8 glycogen branching protein compare
PS417_14065 -2.9 -7.9 UTP--glucose-1-phosphate uridylyltransferase compare
PS417_19650 -2.9 -6.2 chemotaxis protein CheW compare
PS417_19705 -2.8 -3.0 flagellar biosynthesis regulator FlhF compare
PS417_19675 -2.7 -4.7 chemotaxis protein CheY compare
PS417_03260 -2.7 -1.4 5S ribosomal RNA compare
PS417_06680 -2.6 -8.9 nuclease PIN compare
PS417_19690 -2.6 -8.5 histidine kinase compare
PS417_26990 -2.6 -1.0 RNA pyrophosphohydrolase compare
PS417_24745 -2.5 -2.4 gamma-glutamyl phosphate reductase compare
PS417_22445 -2.5 -4.3 ATP-dependent DNA helicase RuvB compare
PS417_01030 -2.5 -1.9 glutamine ABC transporter substrate-binding protein compare
PS417_04380 -2.5 -1.2 ABC transporter permease compare
PS417_21575 -2.4 -7.9 chemotaxis protein compare
PS417_12855 -2.4 -4.5 3-phosphoshikimate 1-carboxyvinyltransferase compare
PS417_19660 -2.4 -6.2 cobalamin biosynthesis protein CobQ compare
PS417_22565 -2.4 -0.9 formyltetrahydrofolate deformylase compare
PS417_26985 -2.4 -5.3 phosphoenolpyruvate-protein phosphotransferase compare
PS417_21480 -2.4 -1.8 23S rRNA pseudouridylate synthase compare
PS417_19805 -2.3 -4.2 flagellar M-ring protein FliF compare
PS417_27040 -2.3 -3.6 3-phosphoglycerate dehydrogenase compare
PS417_23025 -2.2 -6.9 murein transglycosylase compare
PS417_19740 -2.2 -5.1 flagellar biosynthesis protein flip compare
PS417_19725 -2.2 -6.8 flagellar biosynthesis protein FlhB compare
PS417_19860 -2.2 -14.2 flagellar hook protein FlgL compare
PS417_23775 -2.2 -1.9 exodeoxyribonuclease V subunit beta compare
PS417_19885 -2.2 -3.3 flagellar basal body rod protein FlgG compare
PS417_19850 -2.2 -10.3 branched-chain alpha-keto acid dehydrogenase subunit E2 compare
PS417_27865 -2.2 -2.1 LysR family transcriptional regulator compare
PS417_19765 -2.2 -9.9 flagellar hook-length control protein compare
PS417_19840 -2.1 -11.7 flagellar cap protein FliD compare
PS417_16005 -2.1 -4.5 ATPase compare
PS417_27795 -2.1 -0.8 orotate phosphoribosyltransferase compare
PS417_08135 -2.1 -4.2 3-phosphoshikimate 1-carboxyvinyltransferase compare
PS417_19800 -2.1 -3.3 flagellar motor switch protein FliG compare
PS417_04650 -2.0 -0.8 D-alanine--D-alanine ligase compare
PS417_19655 -2.0 -3.3 chemotaxis protein CheW compare
PS417_00180 -2.0 -2.4 tryptophan synthase subunit alpha compare
PS417_18545 -2.0 -2.8 cell division protein compare
PS417_19745 -2.0 -8.9 flagellar assembly protein FliO compare
PS417_19665 -2.0 -4.0 flagellar motor protein MotD compare
PS417_27195 -2.0 -1.4 N-acetylglutamate synthase compare
PS417_20985 -1.9 -1.3 porin compare
PS417_18310 -1.9 -1.0 hypothetical protein compare
PS417_23915 -1.9 -4.9 pantoate--beta-alanine ligase compare
PS417_20715 -1.9 -2.2 cytochrome Cbb3 compare
PS417_19695 -1.9 -9.5 flagellar biosynthesis sigma factor compare
PS417_21585 -1.9 -10.7 flagellar basal body P-ring biosynthesis protein FlgA compare
PS417_01850 -1.9 -4.8 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
PS417_19865 -1.9 -9.6 flagellar hook protein FlgK compare
PS417_01580 -1.9 -1.4 imidazole glycerol phosphate synthase compare
PS417_20785 -1.9 -3.0 transcriptional regulator compare
PS417_19735 -1.9 -6.5 flagellar biosynthesis protein FliQ compare
PS417_19795 -1.9 -11.4 flagellar assembly protein FliH compare
PS417_23135 -1.8 -2.1 GTP-binding protein compare
PS417_19785 -1.8 -5.2 flagellar biogenesis protein compare
PS417_18600 -1.8 -3.0 isopropylmalate isomerase compare
PS417_21595 -1.8 -5.7 flagellar biosynthesis protein FlgN compare
PS417_27835 -1.8 -6.4 endoribonuclease compare
PS417_19790 -1.8 -2.7 ATP synthase compare
PS417_02005 -1.8 -9.8 glutamate synthase compare
PS417_21555 -1.8 -8.0 flagellar hook protein FlgE compare
PS417_27800 -1.8 -1.7 exodeoxyribonuclease III compare
PS417_24710 -1.8 -4.8 lipoprotein compare
PS417_02415 -1.7 -2.4 phosphoserine phosphatase compare
PS417_06200 -1.7 -4.3 protein-PII uridylyltransferase compare
PS417_07170 -1.7 -2.9 hypothetical protein compare
PS417_19880 -1.7 -7.0 flagellar basal body L-ring protein compare
PS417_23805 -1.7 -5.6 acetolactate synthase 3 regulatory subunit compare
PS417_19755 -1.7 -1.9 flagellar motor switch protein FliM compare
PS417_02560 -1.7 -2.0 23S rRNA methyltransferase compare
PS417_19870 -1.7 -3.8 flagellar rod assembly protein FlgJ compare
PS417_04050 -1.7 -2.3 peptide ABC transporter ATP-binding protein compare
PS417_19710 -1.7 -9.8 flagellar biosynthesis protein FlhA compare
PS417_02000 -1.6 -7.3 glutamate synthase compare
PS417_26420 -1.6 -1.3 hypothetical protein compare
PS417_19955 -1.6 -2.0 hypothetical protein compare
PS417_21430 -1.6 -1.5 3-oxoacyl-ACP synthase compare
PS417_05815 -1.6 -4.9 recombinase RecA compare
PS417_20855 -1.6 -1.3 hypothetical protein compare
PS417_02485 -1.6 -3.6 tRNA delta(2)-isopentenylpyrophosphate transferase compare
PS417_06375 -1.6 -0.8 deoxycytidine triphosphate deaminase compare
PS417_02975 -1.6 -4.5 3-dehydroquinate dehydratase compare
PS417_19645 -1.6 -2.4 chemotaxis protein compare
PS417_22450 -1.6 -1.2 ATP-dependent DNA helicase RuvA compare
PS417_23810 -1.5 -7.7 acetolactate synthase 3 catalytic subunit compare
PS417_01565 -1.5 -3.6 imidazole glycerol phosphate synthase compare
PS417_21565 -1.5 -3.2 flagellar basal body rod protein FlgC compare
PS417_07615 -1.5 -5.6 TetR family transcriptional regulator compare
PS417_01795 -1.5 -8.9 glucosyltransferase MdoH compare
PS417_01920 -1.5 -0.6 ATP-dependent protease subunit HslV compare
PS417_10675 -1.5 -0.9 TetR family transcriptional regulator compare
PS417_01575 -1.5 -4.3 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
PS417_04420 -1.5 -7.8 histidinol dehydrogenase compare
PS417_21570 -1.5 -5.7 flagellar basal body rod protein FlgB compare
PS417_01560 -1.5 -2.5 imidazoleglycerol-phosphate dehydratase compare
PS417_23390 -1.5 -6.0 ubiquinol oxidase subunit II compare
PS417_04080 -1.5 -2.5 peptide ABC transporter substrate-binding protein compare
PS417_10720 -1.5 -6.6 chemotaxis protein CheY compare
PS417_26685 -1.4 -2.5 hypothetical protein compare
PS417_19730 -1.4 -2.1 flagellar biosynthesis protein FliR compare
PS417_19350 -1.4 -4.1 GTP cyclohydrolase compare
PS417_00185 -1.4 -3.4 tryptophan synthase subunit beta compare
PS417_03525 -1.4 -1.7 hypothetical protein compare
PS417_27595 -1.4 -2.1 recombinase XerC compare
PS417_12310 -1.4 -5.2 methionine synthase compare
PS417_26730 -1.4 -0.5 pyrroline-5-carboxylate reductase compare
PS417_10245 -1.4 -1.4 hypothetical protein compare
PS417_01790 -1.4 -6.7 glucan biosynthesis protein G compare
PS417_23995 -1.4 -0.7 preprotein translocase subunit SecG compare
PS417_02555 -1.4 -8.7 exoribonuclease R compare
PS417_18540 -1.4 -4.0 colicin V production CvpA compare
PS417_27300 -1.4 -0.8 cell division protein ZapA compare
PS417_18560 -1.4 -7.3 N-(5'-phosphoribosyl)anthranilate isomerase compare
PS417_26900 -1.4 -1.6 L-cystine transporter tcyP compare
PS417_21035 -1.4 -6.8 multidrug transporter compare
PS417_25710 -1.4 -1.3 indole-3-glycerol-phosphate synthase compare
PS417_04385 -1.4 -2.4 organic solvent ABC transporter substrate-binding protein compare
PS417_20160 -1.3 -2.5 cysteine synthase compare
PS417_00580 -1.3 -1.9 acyl-CoA dehydrogenase compare
PS417_19825 -1.3 -8.2 ATPase AAA compare
PS417_01635 -1.3 -5.2 nitrogen regulation protein NR(I) compare
PS417_04365 -1.3 -0.8 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase compare
PS417_05635 -1.3 -5.6 membrane protein compare
PS417_05885 -1.3 -6.1 potassium transporter Kup compare
PS417_16370 -1.3 -5.8 chemotaxis protein CheY compare
PS417_08540 -1.3 -2.0 RNA helicase compare
PS417_08170 -1.3 -6.8 capsular biosynthesis protein compare
PS417_02990 -1.3 -2.2 hypothetical protein compare
PS417_04390 -1.3 -2.4 toluene tolerance protein compare
PS417_24525 -1.2 -1.9 nuclease compare
PS417_26890 -1.2 -6.6 dihydroxy-acid dehydratase compare
PS417_23770 -1.2 -0.7 exodeoxyribonuclease V subunit alpha compare
PS417_00160 -1.2 -2.4 2-dehydro-3-deoxy-6-phosphogalactonate aldolase compare
PS417_06205 -1.2 -6.2 methionine aminopeptidase compare
PS417_21560 -1.2 -4.1 flagellar basal body rod modification protein FlgD compare
PS417_08685 -1.2 -1.5 flagellar hook-length control protein FliK compare
PS417_08090 -1.2 -0.5 3-oxoacyl-ACP reductase compare
PS417_05790 -1.2 -2.0 hypothetical protein compare
PS417_08620 -1.2 -1.0 hypothetical protein compare
PS417_00045 -1.2 -1.4 glycerol acyltransferase compare
PS417_04415 -1.2 -4.6 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
PS417_27425 -1.1 -5.2 exopolyphosphatase compare
PS417_15480 -1.1 -2.1 ABC transporter substrate-binding protein compare
PS417_00535 -1.1 -1.7 Holliday junction resolvase compare
PS417_28145 -1.1 -2.1 AraC family transcriptional regulator compare
PS417_18570 -1.1 -3.6 peptidoglycan-binding protein compare
PS417_03465 -1.1 -1.3 type III secretion protein compare
PS417_23385 -1.1 -6.6 cytochrome o ubiquinol oxidase subunit I compare
PS417_10695 -1.1 -2.7 decarboxylase compare
PS417_16555 -1.1 -1.3 cupin compare
PS417_16750 -1.1 -1.3 ABC transporter ATP-binding protein compare
PS417_10265 -1.1 -1.9 peptidase compare
PS417_24585 -1.1 -6.5 AMP nucleosidase compare
PS417_07710 -1.1 -4.1 membrane protein compare
PS417_23380 -1.1 -2.1 cytochrome o ubiquinol oxidase subunit III compare
PS417_01715 -1.1 -1.1 hypothetical protein compare
PS417_05865 -1.1 -1.5 hypothetical protein compare
PS417_20755 -1.1 -1.6 membrane protein compare
PS417_01640 -1.1 -3.6 histidine kinase compare
PS417_01955 -1.1 -5.5 peptidase compare
PS417_02510 -1.1 -4.0 ATP phosphoribosyltransferase regulatory subunit compare
PS417_23375 -1.1 -1.4 cytochrome C oxidase compare
PS417_01855 -1.0 -1.7 phosphoribosyl-AMP cyclohydrolase compare
PS417_08220 -1.0 -0.8 epimerase compare
PS417_04595 -1.0 -1.5 cell division protein MraZ compare
PS417_19685 -1.0 -4.0 protein phosphatase compare
PS417_18595 -1.0 -2.8 3-isopropylmalate dehydratase compare
PS417_20040 -1.0 -2.2 cobyric acid synthase compare
PS417_22520 -1.0 -1.0 histidine kinase compare
PS417_19830 -1.0 -4.2 flagellar assembly protein FliT compare
PS417_08125 -1.0 -0.5 prephenate dehydratase compare
PS417_21125 -1.0 -4.4 phosphoadenosine phosphosulfate reductase compare
PS417_26725 -1.0 -3.2 hypothetical protein compare
PS417_16715 -1.0 -1.2 DoxX family protein compare
PS417_08155 -1.0 -1.0 integration host factor subunit beta compare
PS417_11070 -1.0 -2.0 rhizopine-binding protein compare
PS417_23170 -1.0 -1.5 FeS assembly protein IscX compare
PS417_19295 -1.0 -2.4 hypothetical protein compare
PS417_21630 -1.0 -1.5 magnesium transporter compare
PS417_22850 -1.0 -4.1 virulence factor family protein compare
PS417_02820 -1.0 -1.9 urea ABC transporter ATP-binding protein compare
PS417_12280 -1.0 -0.9 MerR family transcriptional regulator compare
PS417_25720 -1.0 -3.6 anthranilate synthase component II compare
PS417_20775 -1.0 -3.7 coproporphyrinogen III oxidase compare
PS417_24800 -1.0 -2.7 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase compare
PS417_02270 -0.9 -2.7 carbamoyltransferase compare
PS417_18590 -0.9 -2.6 SAM-dependent methyltransferase compare
PS417_16510 -0.9 -2.3 Clp protease ClpX compare
PS417_10125 -0.9 -2.4 hypothetical protein compare
PS417_15495 -0.9 -1.3 FAD-dependent oxidoreductase compare


Specific Phenotypes

For 1 genes in this experiment

For motility_chemotaxis Method=Plug_approach; Chemical=L-Glutamic acid monopotassium salt monohydrate; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 in Pseudomonas simiae WCS417

For motility_chemotaxis Method=Plug_approach; Chemical=L-Glutamic acid monopotassium salt monohydrate; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 across organisms