Experiment set18IT025 for Pseudomonas putida KT2440

Compare to:

Growth at 30C

200 most important genes:

  gene name fitness t score description  
PP_0787 -7.7 -5.1 quinolinate phosphoribosyltransferase (decarboxylating) monomer compare
PP_1079 -7.4 -5.1 Ornithine carbamoyltransferase compare
PP_0293 -6.9 -3.2 Imidazole glycerol phosphate synthase subunit HisF compare
PP_1986 -6.3 -3.7 3-isopropylmalate dehydratase small subunit compare
PP_0290 -6.3 -7.5 Imidazole glycerol phosphate synthase subunit HisH compare
PP_0422 -6.1 -6.5 Indole-3-glycerol phosphate synthase compare
PP_5289 -6.0 -4.2 Acetylglutamate kinase compare
PP_0967 -5.8 -10.5 histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) compare
PP_5346 -5.7 -11.0 pyruvate carboxylase subunit B compare
PP_0289 -5.3 -9.7 Imidazoleglycerol-phosphate dehydratase compare
PP_1995 -5.2 -9.5 N-(5'-phosphoribosyl)anthranilate isomerase compare
PP_4696 -5.1 -3.6 Nitrogen regulation protein NR(I) compare
PP_2371 -5.1 -9.2 Sulphite reductase hemoprotein, beta subunit compare
PP_0083 -5.0 -8.4 tryptophan synthase beta chain compare
PP_0082 -5.0 -7.6 tryptophan synthase alpha chain compare
PP_5348 -4.6 -8.6 Transcriptional regulator, LysR family compare
PP_1022 -4.5 -3.1 glucose 6-phosphate-1-dehydrogenase compare
PP_2370 -4.4 -4.5 conserved protein of unknown function compare
PP_5347 -4.3 -9.5 pyruvate carboxylase subunit A compare
PP_0184 -4.3 -8.0 Argininosuccinate lyase compare
PP_5015 -4.3 -4.0 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
PP_1088 -4.2 -11.1 Argininosuccinate synthase compare
PP_3511 -4.2 -6.6 Branched-chain-amino-acid aminotransferase compare
PP_1988 -4.2 -7.2 3-isopropylmalate dehydrogenase compare
PP_0363 -4.2 -12.2 8-amino-7-oxononanoate synthase compare
PP_0362 -4.0 -10.7 Biotin synthase compare
PP_0966 -4.0 -7.7 Histidinol dehydrogenase compare
PP_1985 -3.8 -3.3 3-isopropylmalate dehydratase large subunit compare
PP_5014 -3.8 -3.6 Phosphoribosyl-AMP cyclohydrolase compare
PP_0292 -3.7 -2.7 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
PP_3999 -3.7 -10.7 Uroporphyrinogen-III C-methyltransferase/Precorrin-2 dehydrogenase/Sirohydrochlorin ferrochelatase compare
PP_4678 -3.6 -10.9 Ketol-acid reductoisomerase compare
PP_5128 -3.6 -7.4 Dihydroxy-acid dehydratase compare
PP_5097 -3.5 -9.7 homoserine O-acetyltransferase compare
PP_0366 -3.5 -5.0 dethiobiotin synthetase compare
PP_2328 -3.4 -6.1 Phosphoadenosine phosphosulfate reductase compare
PP_0421 -3.4 -7.2 Anthranilate phosphoribosyltransferase compare
PP_4984 -3.4 -7.8 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase compare
PP_4680 -3.2 -9.9 acetohydroxybutanoate synthase / acetolactate synthase compare
PP_0965 -3.2 -6.9 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
PP_5185 -3.2 -5.7 acetylglutamate kinase-like protein (regulatory domain)/amino acid N-acetyltransferase compare
PP_1733 -3.1 -4.8 membrane ATPase of the MinC-MinD-MinE system compare
PP_5303 -3.1 -3.9 aminoacrylate/iminopropionate hydrolase/deaminase compare
PP_5155 -3.1 -4.1 D-3-phosphoglycerate dehydrogenase / alpha-ketoglutarate reductase compare
PP_0364 -3.1 -4.9 pimeloyl-[acp] methyl ester esterase compare
PP_0417 -3.0 -11.4 Anthranilate synthase component 1 compare
PP_1231 -3.0 -4.0 quinolinate synthase [4Fe-4S] cluster subunit compare
PP_2001 -3.0 -6.8 O-succinylhomoserine sulfhydrylase compare
PP_1025 -2.9 -8.1 2-isopropylmalate synthase compare
PP_4909 -2.9 -6.1 phosphoserine phosphatase compare
PP_1237 -2.9 -1.8 4-hydroxy-tetrahydrodipicolinate synthase compare
PP_2168 -2.9 -7.0 Transaldolase compare
PP_5274 -2.8 -2.8 conserved protein of unknown function compare
PP_4700 -2.8 -1.9 pantothenate synthetase compare
PP_5095 -2.7 -1.5 pyrroline-5-carboxylate reductase compare
PP_5098 -2.7 -5.2 methionine biosynthesis protein MetW compare
PP_1654 -2.7 -3.5 cysteine synthase B compare
PP_5017 -2.6 -1.4 Sec-independent protein translocase protein TatB compare
PP_4804 -2.6 -3.6 RlpA-like lipoprotein compare
PP_4679 -2.6 -5.2 acetohydroxybutanoate synthase / acetolactate synthase compare
PP_4785 -2.6 -5.4 conserved exported protein of unknown function compare
PP_5331 -2.6 -2.7 Long-chain acyl-CoA thioester hydrolase compare
PP_3241 -2.5 -1.8 conserved exported protein of unknown function compare
PP_4517 -2.5 -2.5 conserved protein of unknown function compare
PP_1826 -2.5 -2.9 Hydrolase, isochorismatase family compare
PP_2327 -2.4 -4.7 transcriptional dual regulator / CysB-O-acetyl-L-serine compare
PP_0291 -2.4 -2.1 conserved protein of unknown function compare
PP_4890 -2.4 -3.1 ATP phosphoribosyltransferase regulatory subunit compare
PP_5217 -2.3 -7.1 Polyphosphate kinase compare
PP_4271 -2.3 -1.2 conserved protein of unknown function compare
PP_0393 -2.3 -1.5 putative 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase compare
PP_4874 -2.2 -1.5 50S ribosomal protein L9 compare
PP_0420 -2.1 -6.3 aminodeoxychorismate synthase / para-aminobenzoate synthase multi-enzyme complex compare
PP_0365 -2.1 -6.1 Malonyl-[acyl-carrier protein] O-methyltransferase compare
PP_4964 -2.1 -3.5 D-erythrose 4-phosphate dehydrogenase compare
PP_3519 -2.0 -1.3 putative Lipoprotein compare
PP_4720 -2.0 -1.9 putative RNA binding protein compare
PP_4997 -2.0 -1.7 pyrimidine operon regulatory protein/uracil phosphoribosyltransferase compare
PP_3417 -2.0 -3.7 D-gluconate transporter compare
PP_4129 -1.9 -3.4 NADH:ubiquinone oxidoreductase, membrane subunit L compare
PP_4942 -1.9 -3.7 conserved protein of unknown function compare
PP_1362 -1.8 -3.0 pyruvate kinase II compare
PP_5216 -1.7 -1.7 exopolyphosphatase compare
PP_2378 -1.7 -2.3 Fe/S biogenesis protein NfuA compare
PP_1764 -1.7 -2.7 Phosphoglycolate phosphatase 2 compare
PP_1774 -1.7 -2.0 conserved exported protein of unknown function compare
PP_5393 -1.7 -1.3 putative metal-binding chaperone compare
PP_4895 -1.7 -2.7 tRNA dimethylallyltransferase compare
PP_4936 -1.7 -5.2 O-antigen polymerase compare
PP_1676 -1.6 -4.3 subunit of adenosylcobinamide-phosphate synthase beta component compare
PP_0959 -1.6 -1.7 phospholipid ABC transporter compare
PP_4902 -1.6 -2.1 Oligoribonuclease compare
PP_4109 -1.5 -1.4 conserved protein of unknown function compare
PP_4693 -1.5 -3.7 RNA polymerase-binding transcription factor DksA compare
PP_2402 -1.5 -1.7 putative Sensor histidine kinase compare
PP_2414 -1.5 -1.4 conserved exported protein of unknown function compare
PP_3245 -1.5 -1.9 conserved protein of unknown function compare
PP_5350 -1.5 -2.4 Transcriptional regulator, RpiR family compare
PP_2880 -1.4 -2.0 Transcriptional regulator, TetR family compare
PP_1468 -1.4 -1.5 Tyrosine recombinase XerD compare
PP_3821 -1.4 -5.7 UTP-glucose-1-phosphate uridylyltransferase compare
PP_2121 -1.4 -1.1 putative Lipoprotein compare
PP_1426 -1.4 -6.4 L-aspartate oxidase compare
PP_4253 -1.4 -1.7 cytochrome c oxidase subunit, cbb3-type compare
PP_4098 -1.4 -1.2 UvrABC system protein C compare
PP_2309 -1.4 -1.3 conserved protein of unknown function compare
PP_5609 -1.3 -3.1 conserved protein of unknown function compare
PP_4120 -1.3 -2.3 NADH-quinone oxidoreductase subunit B compare
PP_0914 -1.3 -4.9 GGDEF domain protein compare
PP_5639 -1.3 -6.1 conserved exported protein of unknown function compare
PP_0735 -1.3 -1.2 molybdopterin-synthase adenylyltransferase compare
PP_1303 -1.3 -3.8 Sulfate adenylyltransferase subunit 2 compare
PP_1656 -1.3 -4.3 ATP:GTP 3'-pyrophosphotransferase compare
PP_4695 -1.3 -5.7 Sensory box histidine kinase compare
PP_0610 -1.3 -3.3 conserved exported protein of unknown function compare
PP_1898 -1.3 -2.4 MotA/TolQ/ExbB proton channel family protein compare
PP_4546 -1.3 -2.6 ATP-dependent helicase HrpA compare
PP_4480 -1.3 -4.7 arginine N-succinyltransferase, subunit alpha compare
PP_1664 -1.2 -2.2 phosphoribosylglycinamide formyltransferase 1 compare
PP_0958 -1.2 -3.3 phospholipid ABC transporter ATP-binding subunit compare
PP_1729 -1.2 -1.5 conserved protein of unknown function compare
PP_2929 -1.2 -5.0 Carboxynorspermidine/carboxyspermidine decarboxylase compare
PP_2720 -1.2 -1.2 conserved protein of unknown function compare
PP_5486 -1.2 -1.1 conserved protein of unknown function compare
PP_1493 -1.2 -2.6 chemotaxis response regulator protein-glutamate methylesterase of group 3 operon compare
PP_4699 -1.2 -2.0 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
PP_1233 -1.2 -2.6 sulfurtransferase compare
PP_5104 -1.2 -4.5 thiazole synthase compare
PP_5619 -1.1 -2.6 protein of unknown function compare
PP_2403 -1.1 -1.4 Chemotaxis protein CheY compare
PP_0846 -1.1 -0.8 DnaK-like molecular chaperone specific for IscU compare
PP_2375 -1.1 -6.6 cobalamin-dependent methionine synthase compare
PP_4124 -1.1 -2.9 NADH-quinone oxidoreductase subunit G compare
PP_4338 -1.1 -4.0 Chemotaxis histidine kinase CheA compare
PP_4223 -1.1 -1.0 diaminobutyrate-2-oxoglutarate transaminase compare
PP_5557 -1.1 -1.7 protein of unknown function compare
PP_5000 -1.1 -1.2 peptidase component of the ATP-dependent HslVU protease compare
PP_5582 -1.1 -1.1 conserved protein of unknown function compare
PP_0962 -1.1 -1.4 toluene-tolerance protein compare
PP_4131 -1.1 -3.3 NADH-quinone oxidoreductase subunit N compare
PP_1770 -1.1 -1.3 3-phosphoshikimate 1-carboxyvinyltransferase compare
PP_5007 -1.1 -1.6 Polyhydroxyalkanoate granule-associated protein GA2 compare
PP_0832 -1.1 -2.9 S-adenosylmethionine:tRNA ribosyltransferase-isomerase compare
PP_0905 -1.1 -1.4 conserved exported protein of unknown function compare
PP_4560 -1.1 -3.1 putative Ribonuclease BN compare
PP_3307 -1.1 -1.6 conserved protein of unknown function compare
PP_2313 -1.1 -1.6 conserved membrane protein of unknown function compare
PP_0048 -1.1 -1.0 conserved protein of unknown function compare
PP_0893 -1.0 -2.0 ThiJ/PfpI family protein compare
PP_1304 -1.0 -3.1 sulfate adenylyltransferase subunit 1/adenylyl-sulfate kinase compare
PP_1677 -1.0 -2.6 Adenosyl-cobyric acid synthase compare
PP_3065 -1.0 -4.5 Pyocin R2_PP, tail formation compare
PP_4832 -1.0 -2.2 Precorrin-6x reductase compare
PP_3064 -1.0 -1.7 Phage tail protein compare
PP_0339 -1.0 -0.7 Pyruvate dehydrogenase E1 component compare
PP_0220 -1.0 -1.9 methionine import ATP-binding protein metN2 compare
PP_4830 -1.0 -2.7 precorrin-6Y C(5,15)-methyltransferase compare
PP_4482 -1.0 -1.6 Transcriptional regulator, AraC family compare
PP_5583 -1.0 -1.0 conserved protein of unknown function compare
PP_3105 -1.0 -1.7 conserved membrane protein of unknown function compare
PP_3506 -1.0 -1.9 Magnesium chelatase, subunit ChII compare
PP_0725 -1.0 -2.1 conserved hypothetical TPR repeat protein compare
PP_4787 -1.0 -1.3 putative protein with nucleoside triphosphate hydrolase domain compare
PP_5240 -1.0 -1.8 Response regulator compare
PP_2499 -1.0 -1.2 conserved protein of unknown function compare
PP_1013 -1.0 -3.3 Sensor histidine kinase compare
PP_1016 -1.0 -4.2 mannose/glucose ABC transporter, permease protein compare
PP_4994 -1.0 -2.1 conserved protein of unknown function compare
PP_5114 -1.0 -1.6 putative adenine methyltransferase compare
PP_1731 -1.0 -1.8 23S rRNA (746) and tRNA (32) pseudouridine synthase compare
PP_4263 -1.0 -1.9 putative membrane-bounded cytochrome biogenesis cycZ-like domain, copper tolerance protein compare
PP_2152 -1.0 -1.7 glycerophosphoryl diester phosphodiesterase compare
PP_1912 -1.0 -2.6 Phosphate acyltransferase compare
PP_4121 -0.9 -2.8 NADH-quinone oxidoreductase subunit C/D compare
PP_4102 -0.9 -2.2 conserved protein of unknown function compare
PP_4817 -0.9 -1.6 MaoC domain protein compare
PP_0834 -0.9 -1.7 Sec translocation complex subunit YajC compare
PP_1673 -0.9 -2.3 cobyrinate a,c-diamide synthase compare
PP_0630 -0.9 -0.8 DNA gyrase inhibitor YacG compare
PP_5345 -0.9 -2.2 Acetyltransferase, GNAT family compare
PP_4394 -0.9 -3.0 flagella basal body P-ring formation protein compare
PP_1004 -0.9 -1.5 conserved protein of unknown function compare
PP_2633 -0.9 -0.8 conserved protein of unknown function compare
PP_4952 -0.9 -1.2 ATP-dependent RNA helicase, specific for 23S rRNA compare
PP_1783 -0.9 -1.1 dTDP-glucose pyrophosphorylase compare
PP_4724 -0.9 -0.6 Carbamoyl-phosphate synthase small chain compare
PP_1348 -0.9 -2.9 putative MutT/nudix family protein/thiamine-phosphate pyrophosphorylase compare
PP_4355 -0.9 -1.4 flagellar export apparatus subunit compare
PP_1214 -0.9 -1.4 putative transcriptional regulatory protein compare
PP_0516 -0.9 -1.9 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II compare
PP_0547 -0.9 -3.0 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase compare
PP_2000 -0.9 -0.6 amidophosphoribosyl transferase compare
PP_0164 -0.9 -2.1 conserved protein of unknown function compare
PP_2547 -0.8 -1.8 Transcriptional regulator, LysR family compare
PP_0550 -0.8 -2.1 conserved protein of unknown function compare
PP_0303 -0.8 -1.6 dehydrocarnitine cleavage enzyme compare
PP_4379 -0.8 -1.4 Beta-ketoacyl-acyl-carrier-protein synthase I compare
PP_1041 -0.8 -1.5 twin arginine protein export complex subunit compare
PP_2640 -0.8 -1.5 Acetyltransferase, GNAT family compare
PP_3833 -0.8 -2.2 Response regulator compare


Specific Phenotypes

None in this experiment

For Pseudomonas putida KT2440 in temperature experiments

For temperature D-Glucose across organisms