Experiment set18IT025 for Pseudomonas putida KT2440

Compare to:

Growth at 30C

200 most detrimental genes:

  gene name fitness t score description  
PP_3971 +1.4 2.5 conserved protein of unknown function compare
PP_5748 +1.3 1.9 cytochrome c heme lyase subunit compare
PP_4342 +1.3 4.6 flagellar synthesis regulator, putative ATPase compare
PP_1325 +1.3 6.9 putative lipoprotein compare
PP_0274 +1.2 2.6 putative transcriptional regulator containing HTH domain compare
PP_5084 +1.1 7.4 penicillin-insensitive transglycosylase/penicillin-sensitive transpeptidase compare
PP_0888 +1.1 2.7 Photosynthetic apparatus regulatory protein RegA compare
PP_0167 +1.0 8.7 Toxin secretion ATP-binding protein compare
PP_3551 +1.0 1.4 DNA-binding response regulator, LuxR family compare
PP_4875 +1.0 3.5 conserved membrane protein of unknown function compare
PP_1113 +1.0 6.9 Pyridoxal-phosphate dependent enzyme family protein compare
PP_0168 +1.0 9.1 putative surface adhesion protein compare
PP_0801 +1.0 1.5 conserved exported protein of unknown function compare
PP_2331 +1.0 4.0 conserved membrane protein of unknown function compare
PP_1062 +1.0 2.4 MutT/nudix family protein compare
PP_0166 +1.0 7.7 HlyD family secretion protein compare
PP_4373 +1.0 8.1 Transcriptional regulator FleQ compare
PP_2003 +1.0 3.9 conserved protein of unknown function compare
PP_0803 +0.9 4.5 Protein secretion ABC efflux system, membrane fusion protein compare
PP_2715 +0.9 3.5 ArsH protein compare
PP_1428 +0.9 0.8 Sigma factor AlgU negative regulatory protein compare
PP_1353 +0.9 1.7 conserved membrane protein of unknown function compare
PP_1697 +0.9 2.1 transcriptional regulator, GntR family compare
PP_3559 +0.9 2.3 glycine betaine ABC transporter (permease) compare
PP_5580 +0.9 1.5 protein of unknown function compare
PP_1096 +0.8 1.6 putative electron transport complex protein compare
PP_2196 +0.8 2.2 agmatinase compare
PP_2976 +0.8 1.5 putative transposase compare
PP_4317 +0.8 2.5 conserved protein of unknown function compare
PP_0319 +0.8 1.6 conserved protein of unknown function compare
PP_4262 +0.8 1.2 Cytochrome oxidase maturation protein, cbb3-type compare
PP_4905 +0.8 4.0 Flagellar motor rotation protein compare
PP_5706 +0.8 1.4 Sec translocation complex - SecG subunit compare
PP_4519 +0.8 5.8 Agglutination protein compare
PP_0805 +0.8 4.1 Outer membrane efflux protein compare
PP_1808 +0.8 2.5 glucose-6-phosphate isomerase compare
PP_5073 +0.8 1.5 conserved exported protein of unknown function compare
PP_3447 +0.8 1.0 conserved membrane protein of unknown function compare
PP_0165 +0.7 5.8 GGDEF domain protein compare
PP_5423 +0.7 2.4 conserved membrane protein of unknown function compare
PP_3930 +0.7 2.7 conserved exported protein of unknown function compare
PP_0806 +0.7 6.6 putative Surface adhesion protein compare
PP_5538 +0.7 3.1 putative ABC transporter, substrate-binding protein compare
PP_0440 +0.7 1.7 Elongation factor Tu-A compare
PP_4513 +0.7 2.8 conserved protein of unknown function compare
PP_4343 +0.7 2.4 Flagellar biosynthesis protein FlhF compare
PP_2738 +0.7 2.3 putative Transcriptional regulator compare
PP_0804 +0.7 3.7 Protein secretion ABC efflux system, permease and ATP-binding protein compare
PP_2340 +0.7 1.9 conserved protein of unknown function compare
PP_5541 +0.7 2.6 conserved protein of unknown function compare
PP_3412 +0.7 2.8 DNA-binding response regulator, LuxR family compare
PP_4814 +0.7 1.3 ATP-dependent protease La domain protein compare
PP_3964 +0.7 2.9 transposase compare
PP_5428 +0.7 2.1 conserved exported protein of unknown function compare
PP_1702 +0.7 2.2 Recombination-associated protein RdgC compare
PP_4707 +0.7 1.7 OsmY-related protein compare
PP_0833 +0.7 0.8 queuine tRNA-ribosyltransferase compare
PP_4171 +0.7 6.2 conserved exported protein of unknown function compare
PP_1623 +0.7 3.6 RNA polymerase, sigma S (sigma 38) factor compare
PP_4769 +0.7 2.3 conserved protein of unknown function compare
PP_5338 +0.7 2.2 aspartate ammonia-lyase compare
PP_5247 +0.7 1.6 conserved protein of unknown function compare
PP_2318 +0.7 2.0 acyl-CoA thioesterase I/protease I/lysophospholipase L1 compare
PP_1007 +0.7 4.2 putative Transmembrane sensor compare
PP_4946 +0.7 3.6 sodium/L-proline transporter compare
PP_3685 +0.7 2.0 conserved protein of unknown function compare
PP_4820 +0.7 2.2 tRNA-dihydrouridine synthase B compare
PP_1381 +0.7 0.9 4-carboxymuconolactone decarboxylase compare
PP_2794 +0.6 0.9 Oxidoreductase, short chain dehydrogenase/reductase family compare
PP_5487 +0.6 1.4 conserved protein of unknown function compare
PP_5658 +0.6 1.8 protein of unknown function compare
PP_2118 +0.6 1.0 conserved protein of unknown function compare
PP_1813 +0.6 2.0 ComEA-related protein compare
PP_4162 +0.6 2.6 conserved membrane protein of unknown function compare
PP_5248 +0.6 0.3 putative hydrolase compare
PP_4166 +0.6 1.3 conserved protein of unknown function compare
PP_5528 +0.6 0.9 conserved protein of unknown function compare
PP_4892 +0.6 2.4 integral membrane ATP-dependent zinc metallopeptidase / HflK-HflC complex compare
PP_1573 +0.6 2.4 putative Major tail protein compare
PP_2192 +0.6 2.2 putative RNA polymerase sigma-70 factor, ECF subfamily/transmembrane sensor protein compare
PP_5717 +0.6 1.0 conserved protein of unknown function compare
PP_1087 +0.6 3.2 Outer membrane protein, OmpA family compare
PP_3761 +0.6 4.1 Sensor histidine kinase/response regulator compare
PP_5298 +0.6 2.0 putative glutamine amidotransferase compare
PP_5145 +0.6 4.8 phosphoenolpyruvate-dependent regulator (with NPR and NTR proteins) compare
PP_0152 +0.6 1.6 conserved exported protein of unknown function compare
PP_2028 +0.6 1.4 conserved protein of unknown function containing tetratricopeptide (TPR) domain repeat compare
PP_5678 +0.6 1.9 protein of unknown function compare
PP_5517 +0.6 2.3 conserved exported protein of unknown function compare
PP_0585 +0.6 2.1 putative metal-sensitive transcriptional regulator, MerR family compare
PP_2061 +0.6 1.8 conserved protein of unknown function compare
PP_3048 +0.6 1.2 conserved protein of unknown function compare
PP_5107 +0.6 2.4 Monofunctional biosynthetic peptidoglycan transglycosylase compare
PP_4406 +0.6 1.0 conserved protein of unknown function compare
PP_1867 +0.6 2.7 conserved protein of unknown function compare
PP_5324 +0.6 1.1 Response regulator compare
PP_4959 +0.6 4.0 diguanylate cyclase compare
PP_3714 +0.6 2.8 Muconolactone Delta-isomerase compare
PP_1410 +0.6 0.6 conserved protein of unknown function compare
PP_2551 +0.6 1.8 Transcriptional regulator, LysR family compare
PP_4846 +0.6 1.6 L-amino acid N-acyltransferase compare
PP_2319 +0.6 1.6 conserved protein of unknown function compare
PP_2813 +0.6 2.5 BNR domain protein compare
PP_5548 +0.6 1.8 protein of unknown function compare
PP_2737 +0.6 0.5 Oxidoreductase, short-chain dehydrogenase/reductase family compare
PP_1001 +0.6 1.4 arginine deiminase compare
PP_2181 +0.6 1.1 Transcriptional regulator, Cro/CI family compare
PP_2210 +0.6 2.0 LysR family transcriptional regulator compare
PP_3892 +0.6 0.8 conserved protein of unknown function compare
PP_5597 +0.6 1.6 conserved protein of unknown function compare
PP_4435 +0.6 2.6 conserved protein of unknown function compare
PP_3902 +0.6 0.8 conserved protein of unknown function compare
PP_2907 +0.6 1.3 DNA-binding response regulator compare
PP_1635 +0.6 1.7 DNA-binding response regulator compare
PP_5429 +0.6 2.4 protein of unknown function compare
PP_1559 +0.6 2.1 Holin compare
PP_5698 +0.5 2.4 conserved exported protein of unknown function compare
PP_0685 +0.5 0.9 conserved protein of unknown function compare
PP_0135 +0.5 1.4 conserved exported protein of unknown function compare
PP_1368 +0.5 2.0 putative membrane protein containing a glycosyltransferase domain compare
PP_1186 +0.5 0.6 two component system DNA-binding transcriptional dual regulator compare
PP_2931 +0.5 1.7 conserved protein of unknown function compare
PP_3840 +0.5 0.9 conserved protein of unknown function compare
PP_5552 +0.5 1.3 conserved protein of unknown function compare
PP_3878 +0.5 3.2 putative Phage minor capsid protein C compare
PP_1176 +0.5 0.7 conserved protein of unknown function compare
PP_2330 +0.5 1.9 conserved protein of unknown function compare
PP_4057 +0.5 2.5 conserved membrane protein of unknown function with autotransporter beta-domain compare
PP_5162 +0.5 2.1 conserved exported protein of unknown function compare
PP_0414 +0.5 1.8 Polyamine ABC transporter, permease protein compare
PP_0925 +0.5 1.7 conserved protein of unknown function compare
PP_4859 +0.5 2.5 Transcriptional regulator, TetR family compare
PP_5317 +0.5 0.9 Probable chorismate pyruvate-lyase compare
PP_2435 +0.5 1.7 cysteine desulfurase compare
PP_2858 +0.5 1.4 conserved exported protein of unknown function compare
PP_0241 +0.5 2.1 Transporter compare
PP_5329 +0.5 1.1 putative phosphate ABC transporter, periplasmic phosphate-binding protein compare
PP_3647 +0.5 2.2 putative Oxidoreductase compare
PP_1319 +0.5 2.0 Ubiquinol--cytochrome c reductase, cytochrome c1 compare
PP_1276 +0.5 2.6 conserved protein of unknown function compare
PP_1480 +0.5 1.8 conserved protein of unknown function compare
PP_2333 +0.5 2.0 GntR family transcriptional regulator compare
PP_1787 +0.5 1.9 conserved protein of unknown function compare
PP_4094 +0.5 1.1 conserved protein of unknown function compare
PP_2311 +0.5 1.3 Mg-dependent cytoplasmic DNase / RNase compare
PP_1038 +0.5 1.1 conserved protein of unknown function compare
PP_0634 +0.5 2.3 Fimbrial protein compare
PP_4642 +0.5 0.7 Cyclic diguanosine monophosphate-binding protein compare
PP_2710 +0.5 2.0 conserved protein of unknown function compare
PP_0276 +0.5 0.6 Transcriptional regulator, Cro/CI family compare
PP_3190 +0.5 1.6 Ornithine cyclodeaminase/mu-crystallin family protein compare
PP_5621 +0.5 1.4 protein of unknown function compare
PP_2716 +0.5 1.7 arsenate reductase compare
PP_4217 +0.5 4.3 outer membrane ferripyoverdine receptor FpvA, TonB-dependent compare
PP_1749 +0.5 2.4 GNAT family acetyltransferase compare
PP_3707 +0.5 1.4 conserved protein of unknown function compare
PP_1112 +0.5 2.5 conserved membrane protein of unknown function compare
PP_1294 +0.5 1.8 molybdopterin synthase large subunit compare
PP_1512 +0.5 1.0 conserved protein of unknown function compare
PP_1827 +0.5 1.7 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase compare
PP_1005 +0.5 1.9 Heme oxygenase compare
PP_2575 +0.5 0.9 conserved exported protein of unknown function compare
PP_1317 +0.5 1.1 Ubiquinol-cytochrome c reductase iron-sulfur subunit compare
PP_3774 +0.5 2.5 conserved protein of unknown function compare
PP_5110 +0.5 1.2 cytokinetic ring ABC transporter-like subunit - ATP-binding subunit compare
PP_4348 +0.5 1.5 putative Cystathionine beta-lyase compare
PP_3415 +0.5 2.2 Transcriptional regulator, LacI family compare
PP_1002 +0.5 1.3 arginine/ornithine antiporter compare
PP_1522 +0.5 2.1 major cold shock protein compare
PP_1417 +0.5 1.9 putative Tricarboxylate transport protein TctB compare
PP_0211 +0.5 1.2 conserved protein of unknown function compare
PP_0840 +0.5 2.2 serine acetyltransferase compare
PP_3874 +0.5 0.9 conserved protein of unknown function compare
PP_1806 +0.5 2.3 putative arabinose 5-phosphate isomerase compare
PP_3044 +0.5 2.7 Phage portal protein, lambda family compare
PP_0837 +0.5 2.3 putative regulator of flagellation compare
PP_2730 +0.5 2.9 putative Lipoprotein compare
PP_4449 +0.5 1.0 conserved protein of unknown function compare
PP_1397 +0.5 1.2 conserved protein of unknown function compare
PP_4266 +0.5 1.0 Adenine phosphoribosyltransferase compare
PP_3888 +0.5 1.8 conserved protein of unknown function compare
PP_2704 +0.5 2.1 Peptidase, M20/M25/M40 family compare
PP_1812 +0.5 1.4 conserved protein of unknown function compare
PP_4509 +0.5 1.9 conserved protein of unknown function compare
PP_5489 +0.5 1.2 conserved protein of unknown function compare
PP_1759 +0.5 1.6 conserved exported protein of unknown function compare
PP_2229 +0.5 1.1 putative K(+)/H(+) antiporter subunit C compare
PP_5337 +0.5 2.0 LysR family transcriptional regulator compare
PP_4721 +0.5 1.7 conserved membrane protein of unknown function compare
PP_5135 +0.5 2.3 ABC transporter, periplasmic binding protein compare
PP_2693 +0.5 1.7 putative Dipeptidase compare
PP_3051 +0.5 1.5 Pyocin R2_PP, tail spike protein compare
PP_4151 +0.5 1.5 Excisionase domain protein compare
PP_4531 +0.5 1.5 conserved exported protein of unknown function compare
PP_1855 +0.5 1.5 conserved exported protein of unknown function compare
PP_2160 +0.5 1.2 NADPH-dependent 7-cyano-7-deazaguanine reductase compare
PP_5066 +0.5 2.0 K(+)/H(+) antiporter NhaP2 compare
PP_3201 +0.5 1.4 BNR domain protein compare
PP_2138 +0.5 1.6 conserved protein of unknown function compare
PP_3782 +0.5 1.4 conserved protein of unknown function compare


Specific Phenotypes

None in this experiment

For Pseudomonas putida KT2440 in temperature experiments

For temperature D-Glucose across organisms