| | gene | name | fitness | t score | description | |
|---|
| b0462 | acrB | +1.5 | 13.9 | multidrug efflux system protein (NCBI) | compare |
| b4217 | ytfK | +1.3 | 7.1 | orf, hypothetical protein (VIMSS) | compare |
| b0564 | appY | +1.1 | 1.4 | DLP12 prophage; DNA-binding transcriptional activator (NCBI) | compare |
| b0463 | acrA | +1.1 | 7.6 | multidrug efflux system (NCBI) | compare |
| b2024 | hisA | +1.0 | 3.5 | N-(5'-phospho-L-ribosyl-formimino)-5-amino-1-(5'- phosphoribosyl)-4-imidazolecarboxamide isomerase (VIMSS) | compare |
| b1778 | yeaA | +1.0 | 3.1 | methionine sulfoxide reductase B (NCBI) | compare |
| b1824 | yobF | +1.0 | 2.7 | hypothetical protein (NCBI) | compare |
| b2356 | yfdM | +1.0 | 2.8 | orf, hypothetical protein (VIMSS) | compare |
| b1038 | csgF | +1.0 | 3.5 | predicted transport protein (NCBI) | compare |
| b4396 | rob | +0.9 | 7.7 | DNA-binding transcriptional activator (NCBI) | compare |
| b4402 | yjjY | +0.9 | 1.6 | hypothetical protein (NCBI) | compare |
| b1074 | flgC | +0.9 | 3.0 | flagellar basal-body rod protein C (NCBI) | compare |
| b4406 | yaeP | +0.9 | 1.5 | hypothetical protein (NCBI) | compare |
| b3229 | sspA | +0.9 | 3.2 | stringent starvation protein A (NCBI) | compare |
| b1357 | ydaS | +0.9 | 2.6 | Rac prophage; predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b3341 | rpsG | +0.9 | 1.6 | 30S ribosomal protein S7 (NCBI) | compare |
| b2741 | rpoS | +0.8 | 5.2 | RNA polymerase sigma factor (NCBI) | compare |
| b1461 | ydcE | +0.8 | 1.2 | 4-oxalocrotonate tautomerase (NCBI) | compare |
| b1095 | fabF | +0.8 | 5.9 | 3-oxoacyl-(acyl carrier protein) synthase (NCBI) | compare |
| b1823 | cspC | +0.8 | 2.4 | stress protein, member of the CspA-family (NCBI) | compare |
| b2058 | wcaB | +0.8 | 1.5 | predicted acyl transferase (NCBI) | compare |
| b2642 | yfjW | +0.8 | 1.0 | CP4-57 prophage; predicted inner membrane protein (NCBI) | compare |
| b1295 | ymjA | +0.7 | 2.1 | hypothetical protein (NCBI) | compare |
| b3979 | thrT | +0.7 | 0.4 | tRNA-Thr (NCBI) | compare |
| b0998 | torD | +0.7 | 1.2 | chaperone protein TorD (NCBI) | compare |
| b4172 | hfq | +0.7 | 0.7 | RNA-binding protein Hfq (NCBI) | compare |
| b4431 | rprA | +0.7 | 1.6 | Positive regulatory sRNA for RpoS translation; non-essential gene (RefSeq) | compare |
| b2258 | b2258 | +0.7 | 1.3 | putative transport/receptor protein (VIMSS) | compare |
| b1493 | gadB | +0.7 | 0.8 | glutamate decarboxylase B, PLP-dependent (NCBI) | compare |
| b1753 | ynjA | +0.7 | 2.4 | hypothetical protein (NCBI) | compare |
| b1591 | b1591 | +0.7 | 1.0 | putative oxidoreductase component (VIMSS) | compare |
| b0605 | ahpC | +0.7 | 2.3 | alkyl hydroperoxide reductase, C22 subunit (NCBI) | compare |
| b2814 | metZ | +0.6 | 1.3 | tRNA-Met (NCBI) | compare |
| b1765 | ydjA | +0.6 | 0.7 | predicted oxidoreductase (NCBI) | compare |
| b4441 | glmY | +0.6 | 1.8 | sRNA activator of glmS mRNA (RefSeq) | compare |
| b2009 | sbmC | +0.6 | 1.6 | DNA gyrase inhibitor (NCBI) | compare |
| b3977 | tyrU | +0.6 | 0.8 | tRNA-Tyr (NCBI) | compare |
| b1806 | yeaY | +0.6 | 2.3 | predicted lipoprotein (NCBI) | compare |
| b4071 | nrfB | +0.6 | 2.3 | formate-dependent nitrite reductase; a penta-haeme cytochrome c (VIMSS) | compare |
| b0990 | cspG | +0.6 | 0.7 | DNA-binding transcriptional regulator (NCBI) | compare |
| b4647 | mokA | +0.6 | 0.8 | no description | compare |
| b3888 | yiiD | +0.6 | 4.4 | predicted acetyltransferase (NCBI) | compare |
| b1305 | pspB | +0.6 | 1.6 | phage shock protein B (NCBI) | compare |
| b0746 | valZ | +0.6 | 1.5 | tRNA-Val (NCBI) | compare |
| b1954 | dsrA | +0.6 | 2.1 | regulatory antisense RNA (NCBI) | compare |
| b1233 | ychJ | +0.6 | 3.1 | hypothetical protein (NCBI) | compare |
| b2673 | nrdH | +0.6 | 2.0 | glutaredoxin-like protein (NCBI) | compare |
| b1335 | ogt | +0.6 | 1.8 | O-6-alkylguanine-DNA:cysteine-protein methyltransferase (NCBI) | compare |
| b2493 | yfgO | +0.6 | 3.6 | predicted inner membrane protein (NCBI) | compare |
| b1685 | ydiH | +0.6 | 1.0 | predicted protein (RefSeq) | compare |
| b4630 | ykgP | +0.6 | 1.3 | no description | compare |
| b1582 | ynfA | +0.5 | 1.9 | hypothetical protein (NCBI) | compare |
| b3129 | sohA | +0.5 | 2.6 | predicted regulator (NCBI) | compare |
| b1792 | yeaO | +0.5 | 2.5 | orf, hypothetical protein (VIMSS) | compare |
| b4503 | yafF | +0.5 | 0.7 | no description | compare |
| b1743 | spy | +0.5 | 3.1 | envelope stress induced periplasmic protein (NCBI) | compare |
| b1326 | mpaA | +0.5 | 2.5 | murein peptide amidase A (RefSeq) | compare |
| b1414 | ydcF | +0.5 | 2.9 | hypothetical protein (NCBI) | compare |
| b2168 | fruK | +0.5 | 0.7 | 1-phosphofructokinase (NCBI) | compare |
| b4592 | yccB | +0.5 | 1.3 | hypothetical protein (RefSeq) | compare |
| b1919 | yedO | +0.5 | 2.2 | putative 1-aminocyclopropane-1-carboxylate deaminase (VIMSS) | compare |
| b1394 | paaG | +0.5 | 2.2 | enoyl-CoA hydratase (NCBI) | compare |
| b1333 | uspE | +0.5 | 1.7 | stress-induced protein (NCBI) | compare |
| b0881 | clpS | +0.5 | 0.6 | ATP-dependent Clp protease adaptor protein ClpS (NCBI) | compare |
| b4548 | ypjJ | +0.5 | 2.2 | hypothetical protein (NCBI) | compare |
| b4557 | yidD | +0.5 | 1.4 | hypothetical protein (NCBI) | compare |
| b2490 | b2490 | +0.5 | 2.0 | putative protein processing element (VIMSS) | compare |
| b3658 | selC | +0.5 | 1.0 | tRNA-Sec (NCBI) | compare |
| b2446 | yffO | +0.5 | 1.6 | CPZ-55 prophage; predicted protein (NCBI) | compare |
| b4215 | ytfI | +0.5 | 1.0 | hypothetical protein (NCBI) | compare |
| b4523 | yciX | +0.5 | 2.3 | hypothetical protein (RefSeq) | compare |
| b3858 | yihD | +0.5 | 2.1 | hypothetical protein (NCBI) | compare |
| b1831 | proQ | +0.5 | 2.1 | putative solute/DNA competence effector (NCBI) | compare |
| b3163 | nlpI | +0.5 | 2.4 | hypothetical protein (NCBI) | compare |
| b1086 | rluC | +0.5 | 2.7 | 23S rRNA pseudouridylate synthase (NCBI) | compare |
| b0456 | ybaA | +0.5 | 1.8 | hypothetical protein (NCBI) | compare |
| b1566 | flxA | +0.5 | 1.3 | Qin prophage; predicted protein (NCBI) | compare |
| b2262 | menB | +0.5 | 1.7 | naphthoate synthase (NCBI) | compare |
| b1659 | ydhB | +0.5 | 1.1 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b4048 | yjbM | +0.5 | 0.9 | hypothetical protein (NCBI) | compare |
| b2637 | yfjT | +0.5 | 1.4 | CP4-57 prophage; predicted protein (NCBI) | compare |
| b1661 | cfa | +0.5 | 2.1 | cyclopropane fatty acyl phospholipid synthase (unsaturated-phospholipid methyltransferase) (NCBI) | compare |
| b4622 | ytcA | +0.5 | 2.0 | hypothetical protein (RefSeq) | compare |
| b0218 | yafU | +0.5 | 1.5 | predicted inner membrane protein (RefSeq) | compare |
| b0655 | gltI | +0.5 | 1.5 | glutamate and aspartate transporter subunit (NCBI) | compare |
| b2096 | gatY | +0.5 | 1.5 | tagatose-bisphosphate aldolase 1 (VIMSS) | compare |
| b1647 | ydhF | +0.4 | 2.2 | predicted oxidoreductase (NCBI) | compare |
| b2659 | b2659 | +0.4 | 1.7 | orf, hypothetical protein (VIMSS) | compare |
| b1279 | yciS | +0.4 | 0.6 | conserved inner membrane protein (NCBI) | compare |
| b1518 | lsrG | +0.4 | 0.7 | autoinducer-2 (AI-2) modifying protein LsrG (NCBI) | compare |
| b1961 | dcm | +0.4 | 1.1 | DNA cytosine methylase (NCBI) | compare |
| b1639 | ydhA | +0.4 | 1.4 | orf, hypothetical protein (VIMSS) | compare |
| b1298 | ycjL | +0.4 | 2.2 | probable amidotransferase subunit (VIMSS) | compare |
| b1848 | yebG | +0.4 | 1.0 | conserved protein regulated by LexA (NCBI) | compare |
| b3355 | prkB | +0.4 | 3.7 | predicted phosphoribulokinase (NCBI) | compare |
| b0965 | b0965 | +0.4 | 1.3 | orf, hypothetical protein (VIMSS) | compare |
| b2579 | yfiD | +0.4 | 1.4 | pyruvate formate lyase subunit (NCBI) | compare |
| b1329 | b1329 | +0.4 | 2.8 | putative transport periplasmic protein (VIMSS) | compare |
| b1963 | b1963 | +0.4 | 1.9 | orf, hypothetical protein (VIMSS) | compare |
| b1266 | yciV | +0.4 | 1.3 | hypothetical protein (NCBI) | compare |
| b1708 | nlpC | +0.4 | 1.7 | predicted lipoprotein (NCBI) | compare |
| b3155 | yhbQ | +0.4 | 1.5 | hypothetical protein (NCBI) | compare |
| b4704 | arrS | +0.4 | 0.2 | Antisense sRNA ArrS, function unknown (NCBI) | compare |
| b0018 | mokC | +0.4 | 0.8 | regulatory protein for HokC, overlaps CDS of hokC (NCBI) | compare |
| b1355 | b1355 | +0.4 | 1.5 | orf, hypothetical protein (VIMSS) | compare |
| b1473 | yddG | +0.4 | 2.3 | predicted methyl viologen efflux pump (RefSeq) | compare |
| b2535 | csiE | +0.4 | 3.3 | orf, hypothetical protein (VIMSS) | compare |
| b1514 | lsrC | +0.4 | 1.2 | AI2 transporter (NCBI) | compare |
| b1334 | fnr | +0.4 | 1.4 | DNA-binding transcriptional dual regulator, global regulator of anaerobic growth (NCBI) | compare |
| b4651 | yibW | +0.4 | 0.2 | no description | compare |
| b2377 | yfdY | +0.4 | 1.0 | predicted inner membrane protein (NCBI) | compare |
| b1751 | ydjY | +0.4 | 1.8 | orf, hypothetical protein (VIMSS) | compare |
| b4453 | ldrD | +0.4 | 1.1 | toxic polypeptide, small (NCBI) | compare |
| b1108 | ycfP | +0.4 | 1.2 | orf, hypothetical protein (VIMSS) | compare |
| b4679 | yohP | +0.4 | 1.4 | expressed protein (RefSeq) | compare |
| b1148 | ymfM | +0.4 | 1.3 | e14 prophage; predicted protein (NCBI) | compare |
| b4104 | phnE | +0.4 | 1.5 | phosphonate/organophosphate ester transporter subunit (NCBI) | compare |
| b1250 | kch | +0.4 | 2.3 | voltage-gated potassium channel (NCBI) | compare |
| b0653 | gltK | +0.4 | 2.8 | glutamate and aspartate transporter subunit (NCBI) | compare |
| b0542 | renD | +0.4 | 1.2 | orf, hypothetical protein (VIMSS) | compare |
| b1686 | ydiI | +0.4 | 1.1 | hypothetical protein (NCBI) | compare |
| b0398 | sbcD | +0.4 | 1.9 | exonuclease, dsDNA, ATP-dependent (NCBI) | compare |
| b1399 | paaX | +0.4 | 1.3 | DNA-binding transcriptional repressor of phenylacetic acid degradation, aryl-CoA responsive (NCBI) | compare |
| b2136 | yohD | +0.4 | 1.3 | orf, hypothetical protein (VIMSS) | compare |
| b3483 | yhhH | +0.4 | 0.2 | orf, hypothetical protein (VIMSS) | compare |
| b4282 | yjhE | +0.4 | 2.0 | orf, hypothetical protein (VIMSS) | compare |
| b4397 | creA | +0.4 | 1.4 | hypothetical protein (NCBI) | compare |
| b2181 | yejG | +0.4 | 1.4 | hypothetical protein (NCBI) | compare |
| b3636 | rpmG | +0.4 | 1.0 | 50S ribosomal protein L33 (NCBI) | compare |
| b2571 | rseB | +0.4 | 2.3 | periplasmic negative regulator of sigmaE (NCBI) | compare |
| b1013 | ycdC | +0.4 | 1.5 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1221 | narL | +0.4 | 1.9 | DNA-binding response regulator in two-component regulatory system with NarX (or NarQ) (NCBI) | compare |
| b1341 | b1341 | +0.4 | 1.8 | orf, hypothetical protein (VIMSS) | compare |
| b3443 | yrhA | +0.4 | 0.6 | orf, hypothetical protein (VIMSS) | compare |
| b2783 | chpR | +0.4 | 1.4 | antitoxin of the ChpA-ChpR toxin-antitoxin system (NCBI) | compare |
| b3395 | yrfD | +0.4 | 2.9 | orf, hypothetical protein (VIMSS) | compare |
| b2390 | ypeC | +0.4 | 1.3 | hypothetical protein (NCBI) | compare |
| b0870 | ltaE | +0.4 | 2.3 | L-allo-threonine aldolase, PLP-dependent (NCBI) | compare |
| b4480 | hdfR | +0.4 | 1.8 | transcriptional regulator HdfR (NCBI) | compare |
| b2335 | yfcR | +0.4 | 2.0 | predicted fimbrial-like adhesin protein (NCBI) | compare |
| b1299 | puuR | +0.4 | 1.5 | DNA-binding transcriptional repressor (NCBI) | compare |
| b4538 | yoeF | +0.4 | 0.6 | hypothetical protein (RefSeq) | compare |
| b1492 | gadC | +0.4 | 2.1 | predicted glutamate:gamma-aminobutyric acid antiporter (NCBI) | compare |
| b4371 | rsmC | +0.3 | 2.7 | 16S ribosomal RNA m2G1207 methyltransferase (NCBI) | compare |
| b4701 | sokX | +0.3 | 0.3 | sok-related sRNA, function unknown (RefSeq) | compare |
| b1143 | ymfI | +0.3 | 0.8 | orf, hypothetical protein (VIMSS) | compare |
| b4533 | ynfO | +0.3 | 0.5 | Qin prophage; predicted protein (NCBI) | compare |
| b0505 | allA | +0.3 | 1.7 | ureidoglycolate hydrolase (NCBI) | compare |
| b2069 | yegD | +0.3 | 2.5 | putative heat shock protein (VIMSS) | compare |
| b1922 | fliA | +0.3 | 2.2 | flagellar biosynthesis; alternative sigma factor 28; regulation of flagellar operons (VIMSS) | compare |
| b3199 | yrbK | +0.3 | 1.0 | hypothetical protein (NCBI) | compare |
| b1085 | b1085 | +0.3 | 1.1 | orf, hypothetical protein (VIMSS) | compare |
| b1380 | ldhA | +0.3 | 0.9 | D-lactate dehydrogenase (NCBI) | compare |
| b0810 | glnP | +0.3 | 1.3 | glutamine ABC transporter permease protein (NCBI) | compare |
| b1336 | ydaH | +0.3 | 1.7 | putative pump protein (transport) (VIMSS) | compare |
| b1308 | pspE | +0.3 | 1.7 | thiosulfate:cyanide sulfurtransferase (rhodanese) (NCBI) | compare |
| b0240 | crl | +0.3 | 2.3 | DNA-binding transcriptional regulator (NCBI) | compare |
| b2195 | ccmG | +0.3 | 1.6 | periplasmic thioredoxin of cytochrome c-type biogenesis (NCBI) | compare |
| b2823 | ppdC | +0.3 | 2.1 | hypothetical protein (NCBI) | compare |
| b2250 | b2250 | +0.3 | 1.3 | orf, hypothetical protein (VIMSS) | compare |
| b4532 | yncN | +0.3 | 1.1 | orf, hypothetical protein (VIMSS) | compare |
| b1643 | ydhI | +0.3 | 2.0 | predicted inner membrane protein (NCBI) | compare |
| b1431 | ydcL | +0.3 | 1.2 | predicted lipoprotein (NCBI) | compare |
| b2093 | gatB | +0.3 | 1.1 | galactitol-specific enzyme IIB component of PTS (NCBI) | compare |
| b1531 | marA | +0.3 | 1.2 | multiple antibiotic resistance; transcriptional activator of defense systems (VIMSS) | compare |
| b2704 | srlB | +0.3 | 1.3 | glucitol/sorbitol-specific enzyme IIA component of PTS (NCBI) | compare |
| b1070 | flgN | +0.3 | 0.6 | export chaperone for FlgK and FlgL (NCBI) | compare |
| b1246 | oppD | +0.3 | 2.2 | oligopeptide transporter ATP-binding component (NCBI) | compare |
| b3912 | cpxR | +0.3 | 2.2 | DNA-binding response regulator in two-component regulatory system with CpxA (NCBI) | compare |
| b4299 | yjhI | +0.3 | 1.9 | KpLE2 phage-like element; predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b0785 | moaE | +0.3 | 1.1 | molybdopterin synthase, large subunit (NCBI) | compare |
| b3725 | pstB | +0.3 | 0.2 | phosphate transporter subunit (NCBI) | compare |
| b2433 | b2433 | +0.3 | 0.9 | orf, hypothetical protein (VIMSS) | compare |
| b1219 | ychN | +0.3 | 1.1 | hypothetical protein (NCBI) | compare |
| b3257 | yhdT | +0.3 | 1.8 | conserved inner membrane protein (NCBI) | compare |
| b4582 | yoeA | +0.3 | 1.0 | no description | compare |
| b0798 | ybiA | +0.3 | 1.0 | hypothetical protein (NCBI) | compare |
| b1096 | pabC | +0.3 | 1.8 | 4-amino-4-deoxychorismate lyase (NCBI) | compare |
| b2300 | yfcE | +0.3 | 1.2 | orf, hypothetical protein (VIMSS) | compare |
| b1942 | fliJ | +0.3 | 0.5 | flagellar biosynthesis chaperone (NCBI) | compare |
| b3243 | aaeR | +0.3 | 1.2 | predicted DNA-binding transcriptional regulator, efflux system (NCBI) | compare |
| b2186 | yejK | +0.3 | 2.6 | nucleoid-associated protein NdpA (NCBI) | compare |
| b1053 | mdtG | +0.3 | 1.8 | predicted drug efflux system (NCBI) | compare |
| b2948 | yqgE | +0.3 | 1.2 | orf, hypothetical protein (VIMSS) | compare |
| b2541 | hcaB | +0.3 | 1.5 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase (NCBI) | compare |
| b1512 | lsrR | +0.3 | 1.5 | lsr operon transcriptional repressor (NCBI) | compare |
| b2376 | ypdI | +0.3 | 1.0 | predicted lipoprotein involved in colanic acid biosynthesis (NCBI) | compare |
| b1771 | ydjG | +0.3 | 1.5 | predicted oxidoreductase (NCBI) | compare |
| b1698 | ydiR | +0.3 | 1.1 | predicted electron transfer flavoprotein, FAD-binding (NCBI) | compare |
| b1619 | hdhA | +0.3 | 1.9 | 7-alpha-hydroxysteroid dehydrogenase (NCBI) | compare |
| b0388 | aroL | +0.3 | 1.8 | shikimate kinase II (NCBI) | compare |
| b1285 | gmr | +0.3 | 1.7 | modulator of Rnase II stability (NCBI) | compare |
| b3929 | rraA | +0.3 | 2.1 | ribonuclease activity regulator protein RraA (NCBI) | compare |
| b1060 | yceP | +0.3 | 1.4 | orf, hypothetical protein (VIMSS) | compare |
| b2765 | ygcM | +0.3 | 1.2 | 6-pyruvoyl tetrahydrobiopterin synthase (PTPS) (NCBI) | compare |
| b4702 | mgtL | +0.3 | 0.7 | regulatory leader peptide for mgtA (NCBI) | compare |
| b1184 | umuC | +0.3 | 2.2 | DNA polymerase V subunit UmuC (NCBI) | compare |
| b3504 | yhiS | +0.3 | 0.1 | hypothetical protein (RefSeq) | compare |
| b0782 | moaB | +0.3 | 0.8 | molybdopterin biosynthesis protein B (NCBI) | compare |
| b2736 | ygbJ | +0.3 | 1.2 | predicted dehydrogenase, with NAD(P)-binding Rossmann-fold domain (NCBI) | compare |