Experiment set18IT014 for Pseudomonas simiae WCS417

Compare to:

Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50

Genes with specific phenotypes:

  gene name fitness t score description  
PS417_22845 -5.5 -15.5 membrane protein compare
PS417_05575 -4.7 -11.5 Glycerol kinase (EC 2.7.1.30) (from data) compare
PS417_27710 -3.7 -7.7 AsnC family transcriptional regulator compare
PS417_05580 -3.4 -8.4 glycerol uptake facilitator GlpF compare
PS417_04910 -2.7 -6.2 amino acid ABC transporter permease compare
PS417_21100 -2.7 -8.9 alpha-L-glutamate ligase compare
PS417_03670 -2.5 -5.6 MerR family transcriptional regulator compare
PS417_27185 -2.4 -8.7 porin compare
PS417_22555 -2.3 -6.3 chemotaxis protein compare
PS417_21095 -2.2 -6.5 membrane protein compare
PS417_04900 -2.1 -5.6 amino acid ABC transporter substrate-binding protein compare
PS417_25860 -1.9 -5.4 glycerol-3-phosphate acyltransferase compare
PS417_08415 -1.8 -6.3 hypothetical protein compare
PS417_27615 -1.6 -6.3 ammonia channel protein compare
PS417_22500 -1.6 -7.1 porin compare
PS417_22190 -1.5 -5.5 diguanylate cyclase compare
PS417_27810 -1.5 -7.3 ribonuclease PH compare
PS417_08105 -1.4 -7.6 N-ethylammeline chlorohydrolase compare
PS417_17510 -1.1 -5.7 histidine kinase compare
PS417_00245 -1.1 -6.3 oligopeptidase A compare
PS417_02665 -1.0 -5.3 branched-chain amino acid ABC transporter permease compare
PS417_17170 +1.1 7.5 carbon-nitrogen hydrolase compare
PS417_24680 +1.3 9.1 murein transglycosylase compare
PS417_04675 +1.5 5.8 deoxyribonuclease compare
PS417_25700 +1.8 6.0 cyclic AMP receptor protein compare


Specific phenotypes for motility_chemotaxis Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 across organisms