Experiment set18IT014 for Pseudomonas putida KT2440

Compare to:

Temperature shift 30_to_25

200 most important genes:

  gene name fitness t score description  
PP_4890 -7.5 -5.2 ATP phosphoribosyltransferase regulatory subunit compare
PP_0967 -7.1 -4.9 histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) compare
PP_0422 -7.0 -4.9 Indole-3-glycerol phosphate synthase compare
PP_2307 -6.8 -3.0 conserved protein of unknown function compare
PP_1079 -6.8 -4.7 Ornithine carbamoyltransferase compare
PP_0966 -6.8 -4.7 Histidinol dehydrogenase compare
PP_0122 -6.6 -3.8 conserved exported protein of unknown function compare
PP_5303 -6.4 -4.4 aminoacrylate/iminopropionate hydrolase/deaminase compare
PP_0293 -6.3 -2.8 Imidazole glycerol phosphate synthase subunit HisF compare
PP_1985 -6.3 -4.4 3-isopropylmalate dehydratase large subunit compare
PP_0292 -6.3 -4.3 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
PP_2168 -6.2 -8.5 Transaldolase compare
PP_5347 -6.0 -4.1 pyruvate carboxylase subunit A compare
PP_1988 -5.9 -9.0 3-isopropylmalate dehydrogenase compare
PP_5185 -5.9 -4.1 acetylglutamate kinase-like protein (regulatory domain)/amino acid N-acetyltransferase compare
PP_2371 -5.8 -4.0 Sulphite reductase hemoprotein, beta subunit compare
PP_0082 -5.7 -3.9 tryptophan synthase alpha chain compare
PP_0184 -5.6 -3.9 Argininosuccinate lyase compare
PP_0083 -5.5 -3.8 tryptophan synthase beta chain compare
PP_5015 -5.4 -3.7 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
PP_2001 -5.3 -9.6 O-succinylhomoserine sulfhydrylase compare
PP_1995 -5.3 -9.5 N-(5'-phosphoribosyl)anthranilate isomerase compare
PP_0965 -5.2 -10.5 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
PP_5098 -5.2 -8.6 methionine biosynthesis protein MetW compare
PP_5097 -5.1 -13.3 homoserine O-acetyltransferase compare
PP_1088 -5.1 -11.4 Argininosuccinate synthase compare
PP_5348 -5.0 -9.6 Transcriptional regulator, LysR family compare
PP_2088 -5.0 -3.1 RNA polymerase sigma factor SigX compare
PP_0421 -4.9 -9.3 Anthranilate phosphoribosyltransferase compare
PP_5128 -4.9 -8.9 Dihydroxy-acid dehydratase compare
PP_0417 -4.9 -15.8 Anthranilate synthase component 1 compare
PP_3511 -4.9 -6.9 Branched-chain-amino-acid aminotransferase compare
PP_1233 -4.8 -5.8 sulfurtransferase compare
PP_0366 -4.7 -5.1 dethiobiotin synthetase compare
PP_5014 -4.7 -3.2 Phosphoribosyl-AMP cyclohydrolase compare
PP_4678 -4.6 -12.6 Ketol-acid reductoisomerase compare
PP_4696 -4.5 -3.1 Nitrogen regulation protein NR(I) compare
PP_1231 -4.5 -5.3 quinolinate synthase [4Fe-4S] cluster subunit compare
PP_4679 -4.4 -6.9 acetohydroxybutanoate synthase / acetolactate synthase compare
PP_0362 -4.4 -9.8 Biotin synthase compare
PP_0735 -4.4 -1.6 molybdopterin-synthase adenylyltransferase compare
PP_5104 -4.3 -6.6 thiazole synthase compare
PP_0291 -4.2 -4.2 conserved protein of unknown function compare
PP_0289 -4.2 -6.6 Imidazoleglycerol-phosphate dehydratase compare
PP_3417 -4.1 -5.6 D-gluconate transporter compare
PP_2327 -4.0 -6.3 transcriptional dual regulator / CysB-O-acetyl-L-serine compare
PP_5346 -4.0 -7.7 pyruvate carboxylase subunit B compare
PP_3946 -4.0 -1.4 HTH-type transcriptional repressor NicR compare
PP_0787 -4.0 -3.3 quinolinate phosphoribosyltransferase (decarboxylating) monomer compare
PP_1022 -3.9 -2.7 glucose 6-phosphate-1-dehydrogenase compare
PP_4828 -3.8 -1.4 Precorrin-8X methylmutase compare
PP_4680 -3.8 -9.4 acetohydroxybutanoate synthase / acetolactate synthase compare
PP_3926 -3.8 -1.4 short-chain dehydrogenase compare
PP_2402 -3.7 -2.5 putative Sensor histidine kinase compare
PP_2370 -3.5 -3.6 conserved protein of unknown function compare
PP_1025 -3.5 -9.4 2-isopropylmalate synthase compare
PP_0801 -3.5 -1.3 conserved exported protein of unknown function compare
PP_3999 -3.5 -8.1 Uroporphyrinogen-III C-methyltransferase/Precorrin-2 dehydrogenase/Sirohydrochlorin ferrochelatase compare
PP_0003 -3.4 -4.0 16S RNA methyltransferase compare
PP_5289 -3.4 -3.9 Acetylglutamate kinase compare
PP_4922 -3.4 -8.1 Phosphomethylpyrimidine synthase compare
PP_4785 -3.4 -5.2 conserved exported protein of unknown function compare
PP_4909 -3.3 -6.5 phosphoserine phosphatase compare
PP_5331 -3.3 -3.0 Long-chain acyl-CoA thioester hydrolase compare
PP_t29 -3.2 -2.8 tRNA-Ala compare
PP_0832 -3.2 -2.2 S-adenosylmethionine:tRNA ribosyltransferase-isomerase compare
PP_0365 -3.1 -6.1 Malonyl-[acyl-carrier protein] O-methyltransferase compare
PP_4782 -3.0 -2.8 Phosphomethylpyrimidine kinase compare
PP_0290 -2.9 -5.1 Imidazole glycerol phosphate synthase subunit HisH compare
PP_4964 -2.9 -3.9 D-erythrose 4-phosphate dehydrogenase compare
PP_0363 -2.8 -7.7 8-amino-7-oxononanoate synthase compare
PP_3506 -2.8 -2.4 Magnesium chelatase, subunit ChII compare
PP_5217 -2.7 -6.9 Polyphosphate kinase compare
PP_1362 -2.7 -4.5 pyruvate kinase II compare
PP_5533 -2.7 -1.6 conserved protein of unknown function compare
PP_4364 -2.7 -3.3 putative Anti-sigma F factor antagonist compare
PP_1986 -2.5 -2.1 3-isopropylmalate dehydratase small subunit compare
PP_4984 -2.5 -5.0 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase compare
PP_1764 -2.5 -3.1 Phosphoglycolate phosphatase 2 compare
PP_4480 -2.4 -7.2 arginine N-succinyltransferase, subunit alpha compare
PP_0364 -2.4 -4.3 pimeloyl-[acp] methyl ester esterase compare
PP_1217 -2.4 -4.4 Holliday junction ATP-dependent DNA helicase RuvB compare
PP_2328 -2.4 -4.9 Phosphoadenosine phosphosulfate reductase compare
PP_1664 -2.3 -1.6 phosphoribosylglycinamide formyltransferase 1 compare
PP_2375 -2.3 -7.4 cobalamin-dependent methionine synthase compare
PP_5350 -2.3 -3.2 Transcriptional regulator, RpiR family compare
PP_0420 -2.3 -5.5 aminodeoxychorismate synthase / para-aminobenzoate synthase multi-enzyme complex compare
PP_4122 -2.2 -1.8 proton-pumping NADH:ubiquinone oxidoreductase, respiratory complex I, subunit E compare
PP_5155 -2.2 -2.5 D-3-phosphoglycerate dehydrogenase / alpha-ketoglutarate reductase compare
PP_1553 -2.2 -2.4 conserved protein of unknown function compare
PP_1654 -2.2 -3.0 cysteine synthase B compare
PP_4700 -2.2 -1.5 pantothenate synthetase compare
PP_5008 -2.1 -1.4 Poly granule-associated protein compare
PP_5095 -2.1 -1.1 pyrroline-5-carboxylate reductase compare
PP_4902 -2.1 -2.0 Oligoribonuclease compare
PP_1812 -2.1 -2.0 conserved protein of unknown function compare
PP_1679 -2.0 -2.1 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase compare
PP_3105 -2.0 -1.7 conserved membrane protein of unknown function compare
PP_2337 -2.0 -2.3 aconitate isomerase compare
PP_4098 -2.0 -2.2 UvrABC system protein C compare
PP_1673 -2.0 -3.4 cobyrinate a,c-diamide synthase compare
PP_3580 -1.9 -1.5 conserved protein of unknown function compare
PP_4701 -1.9 -1.0 glucose-6-phosphate isomerase compare
PP_3378 -1.9 -2.2 putative 2-ketogluconokinase compare
PP_1672 -1.9 -3.7 cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase compare
PP_1348 -1.9 -2.8 putative MutT/nudix family protein/thiamine-phosphate pyrophosphorylase compare
PP_3505 -1.9 -1.1 conserved protein of unknown function compare
PP_1994 -1.9 -2.0 tRNA pseudouridine (38-40)synthase compare
PP_5313 -1.8 -1.5 DNA-binding protein HU-alpha compare
PP_4126 -1.8 -1.8 NADH-quinone oxidoreductase subunit I compare
PP_5621 -1.8 -1.4 protein of unknown function compare
PP_4832 -1.8 -2.9 Precorrin-6x reductase compare
PP_2414 -1.8 -1.7 conserved exported protein of unknown function compare
PP_1912 -1.8 -4.3 Phosphate acyltransferase compare
PP_4695 -1.7 -5.4 Sensory box histidine kinase compare
PP_2196 -1.7 -2.1 agmatinase compare
PP_4977 -1.7 -4.6 5,10-methylenetetrahydrofolate reductase compare
PP_4338 -1.7 -3.9 Chemotaxis histidine kinase CheA compare
PP_2433 -1.6 -1.3 conserved protein of unknown function compare
PP_3715 -1.6 -2.3 Muconate cycloisomerase 1 compare
PP_1783 -1.6 -1.1 dTDP-glucose pyrophosphorylase compare
PP_2378 -1.6 -2.2 Fe/S biogenesis protein NfuA compare
PP_0393 -1.6 -1.1 putative 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase compare
PP_2862 -1.6 -4.9 Undecaprenyl-diphosphatase compare
PP_0406 -1.6 -1.8 Nucleotidyltransferase family protein compare
PP_1303 -1.6 -3.0 Sulfate adenylyltransferase subunit 2 compare
PP_0261 -1.6 -2.5 adenosine-3'(2'),5'-bisphosphate nucleotidase compare
PP_4124 -1.6 -4.1 NADH-quinone oxidoreductase subunit G compare
PP_4804 -1.5 -2.6 RlpA-like lipoprotein compare
PP_0547 -1.5 -2.9 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase compare
PP_0377 -1.5 -1.5 coenzyme PQQ synthesis protein D compare
PP_5508 -1.5 -1.1 conserved protein of unknown function compare
PP_3234 -1.5 -2.1 Heat shock protein, HSP20 family compare
PP_5114 -1.5 -1.9 putative adenine methyltransferase compare
PP_4555 -1.5 -1.7 conserved protein of unknown function compare
PP_2341 -1.5 -1.2 6-carboxy-5,6,7,8-tetrahydropterin synthase compare
PP_3398 -1.5 -1.2 putative Curli fiber surface-exposed nucleator CsgB compare
PP_4340 -1.5 -2.1 response regulator for chemotactic signal transduction compare
PP_3603 -1.5 -3.0 Transcriptional regulator, GntR family compare
PP_2798 -1.5 -2.1 putative Oxidoreductase compare
PP_4392 -1.4 -4.1 chemotaxis protein methyltransferase compare
PP_3522 -1.4 -1.5 conserved protein of unknown function compare
PP_4824 -1.4 -3.5 Sensor histidine kinase/response regulator compare
PP_4379 -1.4 -2.0 Beta-ketoacyl-acyl-carrier-protein synthase I compare
PP_2002 -1.4 -1.3 putative enzyme compare
PP_4879 -1.4 -2.6 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB compare
PP_4479 -1.4 -2.3 arginine N-succinyltransferase, subunit beta compare
PP_0789 -1.4 -2.9 N-acetyl-anhydromuramyl-L-alanine-amidase compare
PP_1002 -1.4 -3.6 arginine/ornithine antiporter compare
PP_1479 -1.4 -2.0 HicB protein compare
PP_1903 -1.4 -1.0 putative phosphotyrosine-protein phosphatase compare
PP_5139 -1.4 -2.9 cadmium translocating P-type ATPase compare
PP_1011 -1.4 -3.8 glucokinase compare
PP_3507 -1.4 -5.8 Aerobic cobaltochelatase subunit CobN compare
PP_4214 -1.4 -2.7 pyoverdine biosynthesis related protein compare
PP_5739 -1.3 -2.8 protein of unknown function compare
PP_0794 -1.3 -2.6 1-phosphofructokinase monomer compare
PP_1681 -1.3 -4.2 cobalamin 5'-phosphate synthase / Cobalamin synthase compare
PP_5227 -1.3 -3.9 diaminopimelate decarboxylase compare
PP_4830 -1.3 -2.5 precorrin-6Y C(5,15)-methyltransferase compare
PP_0087 -1.3 -1.6 conserved exported protein of unknown function compare
PP_1677 -1.3 -1.8 Adenosyl-cobyric acid synthase compare
PP_1426 -1.3 -5.0 L-aspartate oxidase compare
PP_4253 -1.3 -1.6 cytochrome c oxidase subunit, cbb3-type compare
PP_0833 -1.3 -0.8 queuine tRNA-ribosyltransferase compare
PP_4131 -1.3 -3.7 NADH-quinone oxidoreductase subunit N compare
PP_2145 -1.2 -2.0 beta-N-acetylglucosaminidase compare
PP_3286 -1.2 -3.1 DNA-binding transcriptional repressor PaaX(phenylacetyl-CoA) compare
PP_0405 -1.2 -3.9 conserved protein of unknown function compare
PP_4826 -1.2 -2.7 Precorrin-3B C17-methyltransferase compare
PP_0536 -1.2 -2.6 conserved protein of unknown function compare
PP_5028 -1.2 -2.5 proline iminopeptidase compare
PP_4133 -1.2 -1.2 Transcriptional regulator-related protein compare
PP_5274 -1.2 -1.5 conserved protein of unknown function compare
PP_0978 -1.2 -1.4 conserved protein of unknown function compare
PP_0063 -1.2 -2.2 putative Lipid A biosynthesis lauroyl acyltransferase compare
PP_3614 -1.2 -3.2 conserved membrane protein of unknown function compare
PP_2070 -1.2 -1.0 Transcriptional regulator, AraC family compare
PP_5317 -1.2 -1.8 Probable chorismate pyruvate-lyase compare
PP_0556 -1.2 -2.2 Acetoin catabolism protein compare
PP_4121 -1.2 -3.1 NADH-quinone oxidoreductase subunit C/D compare
PP_5090 -1.2 -2.1 putative cell division protein compare
PP_0164 -1.2 -2.5 conserved protein of unknown function compare
PP_t11 -1.2 -1.9 tRNA-Lys compare
PP_4787 -1.2 -1.3 putative protein with nucleoside triphosphate hydrolase domain compare
PP_1675 -1.2 -3.3 Subunit of adenosylcobinamide-phosphate synthase beta component compare
PP_4957 -1.2 -2.9 conserved protein of unknown function compare
PP_5203 -1.2 -2.7 5-formyltetrahydrofolate cyclo-ligase compare
PP_3508 -1.2 -1.9 Protein CobW compare
PP_0236 -1.2 -1.7 NAD(P)H-dependent FMN reductase subunit compare
PP_0001 -1.2 -0.6 probable chromosome-partitioning protein compare
PP_4760 -1.2 -1.6 Alcohol dehydrogenase, zinc-containing compare
PP_2118 -1.1 -1.2 conserved protein of unknown function compare
PP_4726 -1.1 -1.5 Chaperone protein DnaJ compare
PP_1324 -1.1 -2.9 putative endonuclease distantly related to archaeal Holliday junction resolvase compare
PP_1571 -1.1 -1.0 conserved protein of unknown function compare
PP_0673 -1.1 -1.4 conserved protein of unknown function compare
PP_4827 -1.1 -3.6 Precorrin-2 C(20)-methyltransferase compare
PP_3938 -1.1 -1.3 conserved protein of unknown function compare
PP_4546 -1.1 -2.4 ATP-dependent helicase HrpA compare


Specific Phenotypes

For 1 genes in this experiment

For temperature shift D-Glucose in Pseudomonas putida KT2440

For temperature shift D-Glucose across organisms