| | gene | name | fitness | t score | description | |
|---|
| b0721 | sdhC | +2.1 | 7.4 | succinate dehydrogenase cytochrome b556 large membrane subunit (NCBI) | compare |
| b1192 | ldcA | +2.0 | 7.9 | L,D-carboxypeptidase A (NCBI) | compare |
| b0723 | sdhA | +1.9 | 13.2 | succinate dehydrogenase flavoprotein subunit (NCBI) | compare |
| b0033 | carB | +1.9 | 16.0 | carbamoyl-phosphate synthase large subunit (NCBI) | compare |
| b0724 | sdhB | +1.8 | 10.2 | succinate dehydrogenase, FeS subunit (NCBI) | compare |
| b2281 | nuoI | +1.8 | 6.5 | NADH dehydrogenase subunit I (NCBI) | compare |
| b0032 | carA | +1.7 | 8.5 | carbamoyl-phosphate synthase small subunit (NCBI) | compare |
| b0232 | yafN | +1.6 | 1.5 | predicted antitoxin of the YafO-YafN toxin-antitoxin system (NCBI) | compare |
| b3236 | mdh | +1.6 | 11.7 | malate dehydrogenase (NCBI) | compare |
| b4146 | yjeK | +1.6 | 6.2 | predicted lysine aminomutase (NCBI) | compare |
| b3844 | fre | +1.6 | 10.7 | NAD(P)H-flavin reductase (NCBI) | compare |
| b0722 | sdhD | +1.6 | 7.6 | succinate dehydrogenase cytochrome b556 small membrane subunit (NCBI) | compare |
| b2278 | nuoL | +1.5 | 10.6 | NADH dehydrogenase subunit L (NCBI) | compare |
| b2287 | nuoB | +1.5 | 5.5 | NADH dehydrogenase subunit B (NCBI) | compare |
| b2276 | nuoN | +1.4 | 8.7 | NADH:ubiquinone oxidoreductase, membrane subunit N (RefSeq) | compare |
| b4313 | fimE | +1.4 | 9.1 | tyrosine recombinase/inversion of on/off regulator of fimA (NCBI) | compare |
| b4552 | yrhC | +1.4 | 1.8 | no description | compare |
| b2283 | nuoG | +1.4 | 9.5 | NADH:ubiquinone oxidoreductase, chain G (RefSeq) | compare |
| b2285 | nuoE | +1.4 | 4.3 | NADH dehydrogenase subunit E (NCBI) | compare |
| b2286 | nuoC | +1.4 | 6.9 | NADH:ubiquinone oxidoreductase, chain C,D (RefSeq) | compare |
| b0726 | sucA | +1.3 | 6.5 | alpha-ketoglutarate decarboxylase (NCBI) | compare |
| b2277 | nuoM | +1.3 | 8.3 | NADH dehydrogenase subunit M (NCBI) | compare |
| b2829 | ptsP | +1.3 | 9.9 | fused PTS enzyme: PEP-protein phosphotransferase (enzyme I)/GAF domain containing protein (NCBI) | compare |
| b2897 | ygfY | +1.3 | 7.8 | hypothetical protein (NCBI) | compare |
| b1293 | sapB | +1.2 | 2.0 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b2280 | nuoJ | +1.2 | 6.1 | NADH dehydrogenase subunit J (NCBI) | compare |
| b3198 | kdsC | +1.2 | 4.7 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (NCBI) | compare |
| b1438 | ydcQ | +1.2 | 3.3 | predicted DNA-binding transcriptional regulator (RefSeq) | compare |
| b2279 | nuoK | +1.2 | 3.3 | NADH dehydrogenase subunit K (NCBI) | compare |
| b0049 | apaH | +1.1 | 5.4 | diadenosinetetraphosphatase (NCBI) | compare |
| b3806 | cyaA | +1.1 | 6.1 | adenylate cyclase (NCBI) | compare |
| b2284 | nuoF | +1.1 | 5.5 | NADH:ubiquinone oxidoreductase, chain F (NCBI) | compare |
| b2501 | ppk | +1.1 | 7.7 | polyphosphate kinase (NCBI) | compare |
| b2282 | nuoH | +1.0 | 4.1 | NADH dehydrogenase subunit H (NCBI) | compare |
| b2512 | yfgL | +1.0 | 6.0 | protein assembly complex, lipoprotein component (NCBI) | compare |
| b1085 | b1085 | +1.0 | 3.4 | orf, hypothetical protein (VIMSS) | compare |
| b3199 | yrbK | +1.0 | 4.4 | hypothetical protein (NCBI) | compare |
| b4418 | sraB | +1.0 | 2.2 | unknown RNA (NCBI) | compare |
| b3341 | rpsG | +1.0 | 1.2 | 30S ribosomal protein S7 (NCBI) | compare |
| b3643 | rph | +1.0 | 4.4 | ribonuclease PH (NCBI) | compare |
| b2531 | iscR | +0.9 | 1.4 | DNA-binding transcriptional repressor (NCBI) | compare |
| b0720 | gltA | +0.9 | 6.4 | citrate synthase (NCBI) | compare |
| b3636 | rpmG | +0.9 | 1.6 | 50S ribosomal protein L33 (NCBI) | compare |
| b3620 | rfaF | +0.9 | 4.8 | ADP-heptose:LPS heptosyltransferase II (NCBI) | compare |
| b3405 | ompR | +0.9 | 4.2 | osmolarity response regulator (NCBI) | compare |
| b1062 | pyrC | +0.9 | 5.7 | dihydroorotase (NCBI) | compare |
| b4481 | rffT | +0.8 | 4.2 | 4-alpha-L-fucosyltransferase (NCBI) | compare |
| b4232 | fbp | +0.8 | 6.9 | fructose-1,6-bisphosphatase (NCBI) | compare |
| b3842 | rfaH | +0.8 | 4.6 | transcriptional activator RfaH (NCBI) | compare |
| b4585 | sroB | +0.8 | 1.5 | Novel sRNA, function unknown (RefSeq) | compare |
| b0728 | sucC | +0.8 | 4.6 | succinyl-CoA synthetase subunit beta (NCBI) | compare |
| b1874 | cutC | +0.8 | 2.6 | copper homeostasis protein (NCBI) | compare |
| b3164 | pnp | +0.8 | 2.3 | polynucleotide phosphorylase/polyadenylase (RefSeq) | compare |
| b0934 | ycbM | +0.8 | 3.1 | putative transport system permease protein (VIMSS) | compare |
| b1553 | ydfP | +0.8 | 2.8 | Qin prophage; conserved protein (NCBI) | compare |
| b3484 | yhhI | +0.8 | 2.5 | predicted transposase (NCBI) | compare |
| b2659 | b2659 | +0.8 | 2.7 | orf, hypothetical protein (VIMSS) | compare |
| b2141 | yohJ | +0.8 | 3.2 | hypothetical protein (NCBI) | compare |
| b4592 | yccB | +0.7 | 2.0 | hypothetical protein (RefSeq) | compare |
| b2642 | yfjW | +0.7 | 0.7 | CP4-57 prophage; predicted inner membrane protein (NCBI) | compare |
| b0729 | sucD | +0.7 | 3.8 | succinyl-CoA synthetase subunit alpha (NCBI) | compare |
| b3239 | yhcO | +0.7 | 2.4 | predicted barnase inhibitor (NCBI) | compare |
| b1058 | yceO | +0.7 | 0.4 | hypothetical protein (NCBI) | compare |
| b4416 | rybA | +0.7 | 1.4 | unknown RNA (NCBI) | compare |
| b1446 | ydcY | +0.7 | 2.2 | hypothetical protein (NCBI) | compare |
| b2684 | mprA | +0.7 | 2.7 | DNA-binding transcriptional repressor of microcin B17 synthesis and multidrug efflux (NCBI) | compare |
| b3619 | rfaD | +0.7 | 2.5 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) | compare |
| b3238 | yhcN | +0.7 | 1.9 | orf, hypothetical protein (VIMSS) | compare |
| b4557 | yidD | +0.7 | 2.0 | hypothetical protein (NCBI) | compare |
| b3404 | envZ | +0.7 | 4.8 | osmolarity sensor protein (NCBI) | compare |
| b2516 | yfgA | +0.7 | 3.2 | hypothetical protein (NCBI) | compare |
| b2288 | nuoA | +0.7 | 1.9 | NADH dehydrogenase I chain A (VIMSS) | compare |
| b0739 | tolA | +0.6 | 2.4 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b2393 | nupC | +0.6 | 4.0 | nucleoside (except guanosine) transporter (NCBI) | compare |
| b3163 | nlpI | +0.6 | 2.8 | hypothetical protein (NCBI) | compare |
| b1830 | prc | +0.6 | 3.1 | carboxy-terminal protease for penicillin-binding protein 3 (NCBI) | compare |
| b2433 | b2433 | +0.6 | 1.4 | orf, hypothetical protein (VIMSS) | compare |
| b1856 | yebA | +0.6 | 4.7 | orf, hypothetical protein (VIMSS) | compare |
| b4128 | yjdK | +0.6 | 0.4 | hypothetical protein (NCBI) | compare |
| b0303 | ykgI | +0.6 | 0.7 | orf, hypothetical protein (VIMSS) | compare |
| b1550 | b1550 | +0.6 | 1.1 | orf, hypothetical protein (VIMSS) | compare |
| b3387 | dam | +0.6 | 5.0 | DNA adenine methylase (NCBI) | compare |
| b3250 | mreC | +0.6 | 0.8 | cell wall structural complex MreBCD transmembrane component MreC (NCBI) | compare |
| b2741 | rpoS | +0.6 | 2.8 | RNA polymerase sigma factor (NCBI) | compare |
| b3766 | ilvL | +0.6 | 2.8 | ilvG operon leader peptide (NCBI) | compare |
| b1434 | ydcN | +0.6 | 1.8 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b4203 | rplI | +0.6 | 2.5 | 50S ribosomal protein L9 (NCBI) | compare |
| b0436 | tig | +0.6 | 4.2 | trigger factor (NCBI) | compare |
| b2990 | hybG | +0.6 | 1.4 | hydrogenase 2 accessory protein (NCBI) | compare |
| b3193 | yrbD | +0.6 | 4.0 | predicted ABC-type organic solvent transporter (NCBI) | compare |
| b1914 | uvrY | +0.6 | 2.8 | response regulator (NCBI) | compare |
| b1627 | rsxA | +0.6 | 1.7 | Na(+)-translocating NADH-quinone reductase subunit E (NCBI) | compare |
| b0912 | ihfB | +0.6 | 2.6 | integration host factor subunit beta (NCBI) | compare |
| b1583 | ynfB | +0.6 | 2.5 | hypothetical protein (NCBI) | compare |
| b0737 | tolQ | +0.6 | 1.4 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b3029 | ygiN | +0.6 | 1.7 | quinol monooxygenase (NCBI) | compare |
| b0623 | cspE | +0.6 | 1.4 | cold shock protein E (NCBI) | compare |
| b1143 | ymfI | +0.6 | 1.8 | orf, hypothetical protein (VIMSS) | compare |
| b1074 | flgC | +0.6 | 1.7 | flagellar basal-body rod protein C (NCBI) | compare |
| b1540 | ydfH | +0.6 | 1.8 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2061 | wzb | +0.6 | 1.9 | protein-tyrosine phosphatase (NCBI) | compare |
| b3791 | rffA | +0.6 | 3.3 | TDP-4-oxo-6-deoxy-D-glucose transaminase (NCBI) | compare |
| b3194 | yrbE | +0.6 | 4.2 | predicted toluene transporter subunit: membrane component of ABC superfamily (NCBI) | compare |
| b1111 | ycfQ | +0.6 | 1.9 | orf, hypothetical protein (VIMSS) | compare |
| b1514 | lsrC | +0.5 | 1.7 | AI2 transporter (NCBI) | compare |
| b1147 | ymfL | +0.5 | 1.4 | e14 prophage; predicted DNA-binding transcriptional regulator (RefSeq) | compare |
| b3191 | yrbB | +0.5 | 3.6 | orf, hypothetical protein (VIMSS) | compare |
| b2673 | nrdH | +0.5 | 2.7 | glutaredoxin-like protein (NCBI) | compare |
| b4402 | yjjY | +0.5 | 0.5 | hypothetical protein (NCBI) | compare |
| b1503 | ydeR | +0.5 | 2.0 | predicted fimbrial-like adhesin protein (NCBI) | compare |
| b4075 | nrfF | +0.5 | 2.6 | heme lyase (NrfEFG) for insertion of heme into c552, subunit NrfF (NCBI) | compare |
| b4090 | rpiB | +0.5 | 2.1 | ribose-5-phosphate isomerase B (NCBI) | compare |
| b0222 | lpcA | +0.5 | 1.5 | phosphoheptose isomerase (NCBI) | compare |
| b2215 | ompC | +0.5 | 3.5 | outer membrane porin protein C (NCBI) | compare |
| b3206 | npr | +0.5 | 2.7 | phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) (NCBI) | compare |
| b1837 | yebW | +0.5 | 2.0 | orf, hypothetical protein (VIMSS) | compare |
| b1823 | cspC | +0.5 | 1.6 | stress protein, member of the CspA-family (NCBI) | compare |
| b3192 | yrbC | +0.5 | 3.6 | predicted ABC-type organic solvent transporter (NCBI) | compare |
| b1891 | flhC | +0.5 | 1.9 | DNA-binding transcriptional dual regulator with FlhD (NCBI) | compare |
| b4407 | thiS | +0.5 | 1.1 | sulfur carrier protein ThiS (NCBI) | compare |
| b0014 | dnaK | +0.5 | 1.3 | molecular chaperone DnaK (NCBI) | compare |
| b1171 | b1171 | +0.5 | 1.6 | orf, hypothetical protein (VIMSS) | compare |
| b0985 | ymcB | +0.5 | 2.9 | hypothetical protein (NCBI) | compare |
| b1422 | ydcI | +0.5 | 1.6 | putative transcriptional regulator LYSR-type (VIMSS) | compare |
| b0632 | dacA | +0.5 | 3.0 | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5) (NCBI) | compare |
| b2700 | ygaD | +0.5 | 1.7 | competence damage-inducible protein A (NCBI) | compare |
| b0740 | tolB | +0.5 | 2.5 | translocation protein TolB precursor (NCBI) | compare |
| b0682 | ybfN | +0.5 | 2.1 | predicted lipoprotein (NCBI) | compare |
| b4529 | ydbJ | +0.5 | 0.7 | hypothetical protein (NCBI) | compare |
| b2698 | recX | +0.5 | 1.0 | RecA regulator RecX (NCBI) | compare |
| b1992 | cobS | +0.5 | 1.5 | cobalamin synthase (NCBI) | compare |
| b0535 | fimZ | +0.5 | 2.0 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1565 | ydfV | +0.5 | 2.0 | Qin prophage; predicted protein (NCBI) | compare |
| b2017 | yefM | +0.5 | 0.6 | orf, hypothetical protein (VIMSS) | compare |
| b1819 | manZ | +0.5 | 1.9 | mannose-specific enzyme IID component of PTS (NCBI) | compare |
| b1991 | cobT | +0.5 | 2.1 | nicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferase (NCBI) | compare |
| b0945 | pyrD | +0.5 | 3.5 | dihydroorotate dehydrogenase (NCBI) | compare |
| b1507 | hipA | +0.5 | 2.2 | regulator with hipB (NCBI) | compare |
| b3621 | rfaC | +0.5 | 2.4 | ADP-heptose:LPS heptosyl transferase I (NCBI) | compare |
| b1661 | cfa | +0.5 | 1.9 | cyclopropane fatty acyl phospholipid synthase (unsaturated-phospholipid methyltransferase) (NCBI) | compare |
| b1220 | ychO | +0.4 | 2.1 | predicted invasin (RefSeq) | compare |
| b0738 | tolR | +0.4 | 1.6 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b0746 | valZ | +0.4 | 1.3 | tRNA-Val (NCBI) | compare |
| b1792 | yeaO | +0.4 | 1.8 | orf, hypothetical protein (VIMSS) | compare |
| b3210 | arcB | +0.4 | 2.8 | hybrid sensory histidine kinase in two-component regulatory system with ArcA (NCBI) | compare |
| b4543 | ypaA | +0.4 | 2.2 | predicted protein (NCBI) | compare |
| b1247 | oppF | +0.4 | 2.4 | oligopeptide transporter subunit (NCBI) | compare |
| b2939 | yqgB | +0.4 | 0.8 | predicted protein (RefSeq) | compare |
| b3120 | yhaB | +0.4 | 0.9 | orf, hypothetical protein (VIMSS) | compare |
| b3195 | yrbF | +0.4 | 3.6 | predicted toluene transporter subunit: ATP-binding component of ABC superfamily (NCBI) | compare |
| b1348 | lar | +0.4 | 1.1 | Rac prophage; restriction alleviation protein (NCBI) | compare |
| b1249 | cls | +0.4 | 2.4 | cardiolipin synthetase (NCBI) | compare |
| b4595 | yciY | +0.4 | 0.7 | hypothetical protein (RefSeq) | compare |
| b0708 | phr | +0.4 | 2.6 | deoxyribodipyrimidine photolyase, FAD-binding (NCBI) | compare |
| b2538 | hcaE | +0.4 | 2.2 | 3-phenylpropionate dioxygenase, large (alpha) subunit (NCBI) | compare |
| b1048 | mdoG | +0.4 | 2.7 | glucan biosynthesis protein, periplasmic (NCBI) | compare |
| b3780 | rhlB | +0.4 | 3.5 | ATP-dependent RNA helicase (NCBI) | compare |
| b2674 | nrdI | +0.4 | 2.7 | hypothetical protein (NCBI) | compare |
| b4544 | yfbW | +0.4 | 1.9 | hypothetical protein (NCBI) | compare |
| b0065 | yabI | +0.4 | 1.7 | conserved inner membrane protein (NCBI) | compare |
| b3630 | rfaP | +0.4 | 3.3 | kinase that phosphorylates core heptose of lipopolysaccharide (NCBI) | compare |
| b2617 | smpA | +0.4 | 1.8 | small membrane protein A (VIMSS) | compare |
| b1144 | ymfJ | +0.4 | 1.3 | orf, hypothetical protein (VIMSS) | compare |
| b1936 | intG | +0.4 | 0.7 | predicted defective phage integrase (pseudogene) (RefSeq) | compare |
| b1989 | asnV | +0.4 | 1.3 | tRNA-Asn (NCBI) | compare |
| b0220 | ivy | +0.4 | 2.2 | inhibitor of vertebrate C-lysozyme (NCBI) | compare |
| b4527 | b1354 | +0.4 | 2.0 | orf, hypothetical protein (VIMSS) | compare |
| b1291 | sapD | +0.4 | 0.8 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b0556 | rzpD | +0.4 | 1.9 | DLP12 prophage; predicted murein endopeptidase (NCBI) | compare |
| b0857 | potI | +0.4 | 2.4 | putrescine transporter subunit: membrane component of ABC superfamily (NCBI) | compare |
| b1821 | b1821 | +0.4 | 1.8 | orf, hypothetical protein (VIMSS) | compare |
| b2946 | yggJ | +0.4 | 2.1 | orf, hypothetical protein (VIMSS) | compare |
| b2083 | yegZ | +0.4 | 1.3 | orf, hypothetical protein (VIMSS) | compare |
| b4410 | ecnA | +0.4 | 0.9 | entericidin A membrane lipoprotein, antidote entericidin B (NCBI) | compare |
| b1134 | ymfB | +0.4 | 0.8 | bifunctional thiamin pyrimidine pyrophosphate hydrolase/ thiamin pyrophosphate hydrolase (NCBI) | compare |
| b1804 | rnd | +0.4 | 1.9 | ribonuclease D (NCBI) | compare |
| b1608 | rstA | +0.4 | 1.9 | DNA-binding response regulator in two-component regulatory system with RstB (RefSeq) | compare |
| b2049 | cpsB | +0.4 | 2.2 | mannose-1-phosphate guanyltransferase (NCBI) | compare |
| b3594 | yibA | +0.4 | 2.7 | lyase containing HEAT-repeat (NCBI) | compare |
| b3348 | slyX | +0.4 | 1.8 | hypothetical protein (NCBI) | compare |
| b2186 | yejK | +0.4 | 3.4 | nucleoid-associated protein NdpA (NCBI) | compare |
| b1699 | ydiS | +0.4 | 1.6 | predicted oxidoreductase with FAD/NAD(P)-binding domain (NCBI) | compare |
| b2430 | b2430 | +0.4 | 2.3 | putative beta-lactamase (VIMSS) | compare |
| b1954 | dsrA | +0.4 | 0.7 | regulatory antisense RNA (NCBI) | compare |
| b4215 | ytfI | +0.4 | 0.8 | hypothetical protein (NCBI) | compare |
| b1930 | yedF | +0.4 | 2.2 | hypothetical protein (NCBI) | compare |
| b2809 | b2809 | +0.4 | 0.8 | orf, hypothetical protein (VIMSS) | compare |
| b0848 | ybjM | +0.4 | 2.3 | predicted inner membrane protein (NCBI) | compare |
| b2110 | yehC | +0.4 | 0.6 | predicted periplasmic pilin chaperone (NCBI) | compare |
| b1628 | rsxB | +0.4 | 0.9 | electron transport complex protein RnfB (NCBI) | compare |
| b1400 | paaY | +0.4 | 1.3 | predicted hexapeptide repeat acetyltransferase (NCBI) | compare |
| b2506 | yfgI | +0.4 | 1.4 | hypothetical protein (NCBI) | compare |
| b0937 | ssuE | +0.4 | 1.2 | NAD(P)H-dependent FMN reductase (NCBI) | compare |
| b1412 | azoR | +0.4 | 1.2 | acyl carrier protein phosphodiesterase (NCBI) | compare |
| b4307 | yjhQ | +0.4 | 2.7 | KpLE2 phage-like element; predicted acetyltransferase (NCBI) | compare |
| b1141 | ymfG | +0.4 | 1.4 | e14 prophage; predicted excisionase (NCBI) | compare |
| b4391 | yjjK | +0.4 | 2.7 | fused predicted transporter subunits of ABC superfamily: ATP-binding components (NCBI) | compare |
| b0505 | allA | +0.4 | 1.0 | ureidoglycolate hydrolase (NCBI) | compare |
| b1480 | sra | +0.4 | 0.4 | 30S ribosomal subunit protein S22 (NCBI) | compare |
| b4594 | ymgJ | +0.4 | 1.2 | hypothetical protein (RefSeq) | compare |