| | gene | name | fitness | t score | description | |
|---|
| b0683 | fur | +1.5 | 1.9 | ferric uptake regulator (NCBI) | compare |
| b4529 | ydbJ | +1.0 | 1.7 | hypothetical protein (NCBI) | compare |
| b4655 | ythA | +1.0 | 2.3 | expressed protein (RefSeq) | compare |
| b1279 | yciS | +0.8 | 1.4 | conserved inner membrane protein (NCBI) | compare |
| b1563 | relE | +0.8 | 2.3 | Qin prophage; toxin of the RelE-RelB toxin-antitoxin system (NCBI) | compare |
| b1429 | tehA | +0.8 | 1.3 | potassium-tellurite ethidium and proflavin transporter (NCBI) | compare |
| b1171 | b1171 | +0.8 | 2.4 | orf, hypothetical protein (VIMSS) | compare |
| b4520 | ymgF | +0.7 | 1.5 | hypothetical protein (NCBI) | compare |
| b1514 | lsrC | +0.7 | 1.8 | AI2 transporter (NCBI) | compare |
| b4515 | ybgT | +0.7 | 2.1 | hypothetical protein (NCBI) | compare |
| b1778 | yeaA | +0.7 | 2.3 | methionine sulfoxide reductase B (NCBI) | compare |
| b1348 | lar | +0.7 | 1.5 | Rac prophage; restriction alleviation protein (NCBI) | compare |
| b2576 | srmB | +0.7 | 2.5 | ATP-dependent RNA helicase (NCBI) | compare |
| b1731 | cedA | +0.6 | 2.6 | cell division modulator (RefSeq) | compare |
| b1760 | ynjH | +0.6 | 2.4 | hypothetical protein (NCBI) | compare |
| b4406 | yaeP | +0.6 | 2.2 | hypothetical protein (NCBI) | compare |
| b4552 | yrhC | +0.6 | 0.7 | no description | compare |
| b1357 | ydaS | +0.6 | 2.1 | Rac prophage; predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1433 | b1433 | +0.6 | 2.4 | putative membrane transport protein (VIMSS) | compare |
| b4594 | ymgJ | +0.6 | 1.6 | hypothetical protein (RefSeq) | compare |
| b4215 | ytfI | +0.6 | 1.2 | hypothetical protein (NCBI) | compare |
| b1823 | cspC | +0.6 | 1.7 | stress protein, member of the CspA-family (NCBI) | compare |
| b0707 | ybgA | +0.6 | 2.6 | hypothetical protein (NCBI) | compare |
| b4394 | yjjX | +0.6 | 2.5 | orf, hypothetical protein (VIMSS) | compare |
| b1482 | osmC | +0.6 | 1.3 | osmotically inducible, stress-inducible membrane protein (NCBI) | compare |
| b1954 | dsrA | +0.5 | 1.9 | regulatory antisense RNA (NCBI) | compare |
| b2432 | yfeY | +0.5 | 1.5 | hypothetical protein (NCBI) | compare |
| b4402 | yjjY | +0.5 | 0.6 | hypothetical protein (NCBI) | compare |
| b1708 | nlpC | +0.5 | 2.6 | predicted lipoprotein (NCBI) | compare |
| b1818 | manY | +0.5 | 1.1 | mannose-specific enzyme IIC component of PTS (NCBI) | compare |
| b2444 | yffM | +0.5 | 1.4 | CPZ-55 prophage; predicted protein (NCBI) | compare |
| b0580 | ybdJ | +0.5 | 1.7 | predicted inner membrane protein (NCBI) | compare |
| b1233 | ychJ | +0.5 | 2.8 | hypothetical protein (NCBI) | compare |
| b1088 | yceD | +0.5 | 2.5 | hypothetical protein (NCBI) | compare |
| b1412 | azoR | +0.5 | 1.9 | acyl carrier protein phosphodiesterase (NCBI) | compare |
| b4480 | hdfR | +0.5 | 3.7 | transcriptional regulator HdfR (NCBI) | compare |
| b1942 | fliJ | +0.5 | 1.4 | flagellar biosynthesis chaperone (NCBI) | compare |
| b4280 | yjhC | +0.5 | 3.2 | putative dehydrogenase (VIMSS) | compare |
| b0564 | appY | +0.5 | 1.0 | DLP12 prophage; DNA-binding transcriptional activator (NCBI) | compare |
| b3858 | yihD | +0.5 | 2.2 | hypothetical protein (NCBI) | compare |
| b1434 | ydcN | +0.5 | 1.3 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b3261 | fis | +0.5 | 1.3 | DNA-binding protein Fis (NCBI) | compare |
| b0828 | iaaA | +0.5 | 1.6 | L-asparaginase (NCBI) | compare |
| b4246 | pyrL | +0.5 | 1.2 | pyrBI operon leader peptide (NCBI) | compare |
| b4369 | leuP | +0.5 | 2.1 | tRNA-Leu (NCBI) | compare |
| b1931 | yedK | +0.5 | 2.2 | hypothetical protein (NCBI) | compare |
| b4596 | yciZ | +0.5 | 1.4 | hypothetical protein (RefSeq) | compare |
| b1111 | ycfQ | +0.4 | 2.2 | orf, hypothetical protein (VIMSS) | compare |
| b1220 | ychO | +0.4 | 2.2 | predicted invasin (RefSeq) | compare |
| b4646 | yrdE | +0.4 | 1.9 | no description | compare |
| b1527 | yneK | +0.4 | 1.3 | hypothetical protein (NCBI) | compare |
| b1572 | ydfB | +0.4 | 1.1 | orf, hypothetical protein (VIMSS) | compare |
| b0357 | yaiN | +0.4 | 1.5 | putative alpha helix chain (VIMSS) | compare |
| b1007 | b1007 | +0.4 | 1.2 | orf, hypothetical protein (VIMSS) | compare |
| b1164 | ycgZ | +0.4 | 0.7 | hypothetical protein (NCBI) | compare |
| b0866 | ybjQ | +0.4 | 0.9 | hypothetical protein (NCBI) | compare |
| b1856 | yebA | +0.4 | 2.8 | orf, hypothetical protein (VIMSS) | compare |
| b1850 | eda | +0.4 | 1.2 | keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase (NCBI) | compare |
| b2579 | yfiD | +0.4 | 1.3 | pyruvate formate lyase subunit (NCBI) | compare |
| b0895 | dmsB | +0.4 | 2.8 | dimethyl sulfoxide reductase, anaerobic, subunit B (NCBI) | compare |
| b1446 | ydcY | +0.4 | 1.2 | hypothetical protein (NCBI) | compare |
| b2258 | b2258 | +0.4 | 0.8 | putative transport/receptor protein (VIMSS) | compare |
| b3029 | ygiN | +0.4 | 1.5 | quinol monooxygenase (NCBI) | compare |
| b2066 | udk | +0.4 | 2.1 | uridine/cytidine kinase (VIMSS) | compare |
| b1085 | b1085 | +0.4 | 1.2 | orf, hypothetical protein (VIMSS) | compare |
| b4163 | glyV | +0.4 | 1.1 | tRNA-Gly (NCBI) | compare |
| b4012 | yjaB | +0.4 | 2.0 | predicted acetyltransferase (NCBI) | compare |
| b1814 | sdaA | +0.4 | 1.5 | L-serine deaminase I (NCBI) | compare |
| b0556 | rzpD | +0.4 | 1.5 | DLP12 prophage; predicted murein endopeptidase (NCBI) | compare |
| b0753 | ybgS | +0.4 | 2.1 | hypothetical protein (NCBI) | compare |
| b1478 | adhP | +0.4 | 1.3 | alcohol dehydrogenase (VIMSS) | compare |
| b4533 | ynfO | +0.4 | 1.3 | Qin prophage; predicted protein (NCBI) | compare |
| b2894 | xerD | +0.4 | 0.3 | site-specific tyrosine recombinase XerD (NCBI) | compare |
| b1151 | ymfO | +0.4 | 1.8 | e14 prophage; conserved protein (RefSeq) | compare |
| b1513 | lsrA | +0.4 | 1.9 | fused AI2 transporter subunits of ABC superfamily: ATP-binding components (NCBI) | compare |
| b1841 | yobA | +0.4 | 1.2 | hypothetical protein (NCBI) | compare |
| b3500 | gor | +0.4 | 0.8 | glutathione reductase (NCBI) | compare |
| b1431 | ydcL | +0.4 | 2.0 | predicted lipoprotein (NCBI) | compare |
| b4017 | arpA | +0.4 | 1.6 | regulator of acetyl CoA synthetase (NCBI) | compare |
| b0393 | rdgC | +0.4 | 3.0 | recombination associated protein (NCBI) | compare |
| b1679 | sufE | +0.4 | 1.5 | cysteine desufuration protein SufE (NCBI) | compare |
| b3163 | nlpI | +0.4 | 1.6 | hypothetical protein (NCBI) | compare |
| b2343 | b2343 | +0.4 | 1.1 | orf, hypothetical protein (VIMSS) | compare |
| b3950 | frwB | +0.4 | 1.7 | predicted enzyme IIB component of PTS (NCBI) | compare |
| b0125 | hpt | +0.4 | 2.2 | hypoxanthine phosphoribosyltransferase (VIMSS) | compare |
| b0817 | mntR | +0.4 | 1.5 | DNA-binding transcriptional regulator of mntH (NCBI) | compare |
| b2248 | yfaX | +0.4 | 0.8 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1726 | yniB | +0.4 | 1.0 | predicted inner membrane protein (NCBI) | compare |
| b0803 | ybiI | +0.4 | 1.5 | hypothetical protein (NCBI) | compare |
| b2741 | rpoS | +0.4 | 2.5 | RNA polymerase sigma factor (NCBI) | compare |
| b3260 | dusB | +0.4 | 1.5 | tRNA-dihydrouridine synthase B (NCBI) | compare |
| b0248 | yafX | +0.4 | 1.8 | CP4-6 prophage; predicted protein (NCBI) | compare |
| b4438 | cyaR | +0.4 | 1.2 | sRNA effector of ompX mRNA instability, cAMP-induced; hfq-dependent (RefSeq) | compare |
| b0682 | ybfN | +0.4 | 2.2 | predicted lipoprotein (NCBI) | compare |
| b3206 | npr | +0.4 | 1.4 | phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) (NCBI) | compare |
| b0462 | acrB | +0.4 | 3.4 | multidrug efflux system protein (NCBI) | compare |
| b1443 | ydcV | +0.4 | 1.4 | predicted spermidine/putrescine transporter subunit (NCBI) | compare |
| b1656 | sodB | +0.4 | 1.1 | superoxide dismutase, Fe (NCBI) | compare |
| b4653 | yicT | +0.4 | 1.1 | no description | compare |
| b1021 | ycdP | +0.4 | 2.1 | predicted inner membrane protein (NCBI) | compare |
| b0483 | ybaQ | +0.4 | 2.1 | orf, hypothetical protein (VIMSS) | compare |
| b1944 | fliL | +0.4 | 2.0 | flagellar basal body-associated protein FliL (NCBI) | compare |
| b2488 | hyfH | +0.4 | 2.1 | hydrogenase 4, Fe-S subunit (NCBI) | compare |
| b1926 | fliT | +0.4 | 1.9 | predicted chaperone (NCBI) | compare |
| b1789 | yeaL | +0.4 | 1.7 | conserved inner membrane protein (NCBI) | compare |
| b3644 | yicC | +0.4 | 2.1 | hypothetical protein (NCBI) | compare |
| b4598 | yncL | +0.4 | 1.2 | hypothetical protein (RefSeq) | compare |
| b3916 | pfkA | +0.3 | 1.1 | 6-phosphofructokinase (NCBI) | compare |
| b2200 | ccmB | +0.3 | 1.9 | heme exporter subunit (NCBI) | compare |
| b4651 | yibW | +0.3 | 0.2 | no description | compare |
| b0167 | glnD | +0.3 | 1.6 | PII uridylyl-transferase (NCBI) | compare |
| b3028 | mdaB | +0.3 | 2.1 | NADPH quinone reductase (NCBI) | compare |
| b2399 | yfeD | +0.3 | 1.9 | predicted DNA-binding transcriptional regulator (RefSeq) | compare |
| b2250 | b2250 | +0.3 | 1.6 | orf, hypothetical protein (VIMSS) | compare |
| b3024 | ygiW | +0.3 | 1.4 | hypothetical protein (NCBI) | compare |
| b1628 | rsxB | +0.3 | 1.5 | electron transport complex protein RnfB (NCBI) | compare |
| b1329 | b1329 | +0.3 | 2.3 | putative transport periplasmic protein (VIMSS) | compare |
| b1802 | yeaW | +0.3 | 1.3 | predicted 2Fe-2S cluster-containing protein (NCBI) | compare |
| b0632 | dacA | +0.3 | 2.4 | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5) (NCBI) | compare |
| b0463 | acrA | +0.3 | 2.6 | multidrug efflux system (NCBI) | compare |
| b1424 | mdoD | +0.3 | 1.7 | glucan biosynthesis protein, periplasmic (RefSeq) | compare |
| b2136 | yohD | +0.3 | 0.6 | orf, hypothetical protein (VIMSS) | compare |
| b4104 | phnE | +0.3 | 1.6 | phosphonate/organophosphate ester transporter subunit (NCBI) | compare |
| b3406 | greB | +0.3 | 2.5 | transcription elongation factor GreB (NCBI) | compare |
| b3195 | yrbF | +0.3 | 2.6 | predicted toluene transporter subunit: ATP-binding component of ABC superfamily (NCBI) | compare |
| b2571 | rseB | +0.3 | 1.9 | periplasmic negative regulator of sigmaE (NCBI) | compare |
| b0226 | dinJ | +0.3 | 1.4 | predicted antitoxin of YafQ-DinJ toxin-antitoxin system (NCBI) | compare |
| b2092 | gatC | +0.3 | 2.2 | galactitol-specific enzyme IIC component of PTS (NCBI) | compare |
| b2428 | yfeU | +0.3 | 1.7 | N-acetylmuramic acid-6-phosphate etherase (NCBI) | compare |
| b1179 | ycgL | +0.3 | 1.0 | conserved protein (NCBI) | compare |
| b1837 | yebW | +0.3 | 1.1 | orf, hypothetical protein (VIMSS) | compare |
| b2095 | gatZ | +0.3 | 1.9 | D-tagatose 1,6-bisphosphate aldolase 2, subunit (NCBI) | compare |
| b2420 | yfeS | +0.3 | 1.8 | hypothetical protein (NCBI) | compare |
| b2637 | yfjT | +0.3 | 1.0 | CP4-57 prophage; predicted protein (NCBI) | compare |
| b1647 | ydhF | +0.3 | 1.9 | predicted oxidoreductase (NCBI) | compare |
| b2377 | yfdY | +0.3 | 1.0 | predicted inner membrane protein (NCBI) | compare |
| b0946 | ycbW | +0.3 | 1.5 | orf, hypothetical protein (VIMSS) | compare |
| b3817 | yigF | +0.3 | 1.8 | conserved inner membrane protein (NCBI) | compare |
| b2457 | cchA | +0.3 | 1.6 | detox protein (VIMSS) | compare |
| b1798 | yeaS | +0.3 | 1.8 | neutral amino-acid efflux system (NCBI) | compare |
| b0836 | yliH | +0.3 | 1.3 | hypothetical protein (NCBI) | compare |
| b4675 | yoaJ | +0.3 | 0.9 | expressed protein (RefSeq) | compare |
| b3761 | trpT | +0.3 | 0.7 | tRNA-Trp (NCBI) | compare |
| b2792 | yqcC | +0.3 | 1.0 | hypothetical protein (NCBI) | compare |
| b4325 | yjiC | +0.3 | 1.2 | orf, hypothetical protein (VIMSS) | compare |
| b1669 | ydhT | +0.3 | 1.3 | hypothetical protein (NCBI) | compare |
| b1285 | gmr | +0.3 | 1.8 | modulator of Rnase II stability (NCBI) | compare |
| b3587 | yiaW | +0.3 | 1.8 | conserved inner membrane protein (NCBI) | compare |
| b2930 | yggF | +0.3 | 1.7 | predicted hexoseP phosphatase (NCBI) | compare |
| b1377 | ompN | +0.3 | 1.5 | outer membrane pore protein N, non-specific (NCBI) | compare |
| b3423 | glpR | +0.3 | 2.2 | DNA-binding transcriptional repressor (NCBI) | compare |
| b2198 | ccmD | +0.3 | 1.3 | cytochrome c biogenesis protein (NCBI) | compare |
| b1959 | yedA | +0.3 | 1.5 | predicted inner membrane protein (NCBI) | compare |
| b1411 | ynbD | +0.3 | 1.9 | predicted phosphatase, inner membrane protein (NCBI) | compare |
| b1255 | yciC | +0.3 | 1.2 | hypothetical protein (NCBI) | compare |
| b2644 | yfjY | +0.3 | 1.5 | CP4-57 prophage; predicted DNA repair protein (NCBI) | compare |
| b1752 | ydjZ | +0.3 | 1.6 | conserved inner membrane protein (NCBI) | compare |
| b3238 | yhcN | +0.3 | 1.0 | orf, hypothetical protein (VIMSS) | compare |
| b1221 | narL | +0.3 | 1.7 | DNA-binding response regulator in two-component regulatory system with NarX (or NarQ) (NCBI) | compare |
| b4504 | ykfH | +0.3 | 1.0 | hypothetical protein (NCBI) | compare |
| b0825 | mipB | +0.3 | 1.4 | putative transaldolase (VIMSS) | compare |
| b0711 | ybgJ | +0.3 | 1.7 | predicted enzyme subunit (NCBI) | compare |
| b3181 | greA | +0.3 | 1.4 | transcription elongation factor: cleaves 3' nucleotide of paused mRNA (VIMSS) | compare |
| b4380 | yjjI | +0.3 | 2.2 | hypothetical protein (NCBI) | compare |
| b3153 | yhbO | +0.3 | 1.8 | orf, hypothetical protein (VIMSS) | compare |
| b1569 | dicC | +0.3 | 1.5 | Qin prophage; DNA-binding transcriptional regulator for DicB (NCBI) | compare |
| b4314 | fimA | +0.3 | 2.0 | major type 1 subunit fimbrin (pilin) (NCBI) | compare |
| b4511 | ybdZ | +0.3 | 1.1 | hypothetical protein (NCBI) | compare |
| b4704 | arrS | +0.3 | 0.1 | Antisense sRNA ArrS, function unknown (NCBI) | compare |
| b0368 | tauD | +0.3 | 1.3 | taurine dioxygenase (NCBI) | compare |
| b4702 | mgtL | +0.3 | 0.8 | regulatory leader peptide for mgtA (NCBI) | compare |
| b1728 | ydjM | +0.3 | 1.0 | predicted inner membrane protein regulated by LexA (RefSeq) | compare |
| b4152 | frdC | +0.3 | 1.1 | fumarate reductase subunit C (NCBI) | compare |
| b4212 | ytfH | +0.3 | 1.9 | orf, hypothetical protein (VIMSS) | compare |
| b3764 | yifE | +0.3 | 1.3 | hypothetical protein (NCBI) | compare |
| b0858 | ybjO | +0.3 | 1.0 | predicted inner membrane protein (NCBI) | compare |
| b0821 | ybiU | +0.3 | 2.0 | hypothetical protein (NCBI) | compare |
| b3643 | rph | +0.3 | 2.1 | ribonuclease PH (NCBI) | compare |
| b2363 | yfdT | +0.3 | 0.7 | CPS-53 (KpLE1) prophage; predicted protein (NCBI) | compare |
| b3243 | aaeR | +0.3 | 1.6 | predicted DNA-binding transcriptional regulator, efflux system (NCBI) | compare |
| b2971 | yghG | +0.3 | 2.0 | hypothetical protein (NCBI) | compare |
| b3083 | ygjN | +0.3 | 2.0 | hypothetical protein (NCBI) | compare |
| b1035 | ycdY | +0.3 | 1.7 | hypothetical protein (NCBI) | compare |
| b2221 | atoD | +0.3 | 1.4 | acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit (NCBI) | compare |
| b1946 | fliN | +0.3 | 1.6 | flagellar motor switch protein (NCBI) | compare |
| b2141 | yohJ | +0.3 | 1.2 | hypothetical protein (NCBI) | compare |
| b1020 | phoH | +0.3 | 1.3 | conserved protein with nucleoside triphosphate hydrolase domain (NCBI) | compare |
| b2033 | wbbJ | +0.3 | 1.9 | predicted acyl transferase (NCBI) | compare |
| b2744 | surE | +0.3 | 1.8 | acid phosphatase (NCBI) | compare |
| b4299 | yjhI | +0.3 | 1.6 | KpLE2 phage-like element; predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1441 | ydcT | +0.3 | 1.3 | predicted spermidine/putrescine transporter subunit (NCBI) | compare |
| b1202 | ycgV | +0.3 | 2.2 | predicted adhesin (NCBI) | compare |
| b2123 | yehR | +0.3 | 1.3 | orf, hypothetical protein (VIMSS) | compare |
| b0350 | mhpD | +0.3 | 1.8 | 2-keto-4-pentenoate hydratase (VIMSS) | compare |
| b4566 | yjhX | +0.3 | 1.1 | hypothetical protein (NCBI) | compare |
| b1486 | ddpB | +0.3 | 0.7 | D-ala-D-ala transporter subunit (NCBI) | compare |
| b1675 | ydhZ | +0.3 | 1.4 | hypothetical protein (NCBI) | compare |
| b4157 | yjeN | +0.3 | 1.6 | hypothetical protein (NCBI) | compare |
| b4363 | yjjB | +0.3 | 1.1 | conserved inner membrane protein (RefSeq) | compare |
| b0840 | deoR | +0.3 | 1.1 | DNA-binding transcriptional repressor (NCBI) | compare |