| | gene | name | fitness | t score | description | |
|---|
| b0462 | acrB | +4.5 | 43.4 | multidrug efflux system protein (NCBI) | compare |
| b0463 | acrA | +4.4 | 25.8 | multidrug efflux system (NCBI) | compare |
| b4396 | rob | +1.8 | 14.4 | DNA-binding transcriptional activator (NCBI) | compare |
| b1831 | proQ | +1.6 | 5.7 | putative solute/DNA competence effector (NCBI) | compare |
| b1954 | dsrA | +1.3 | 5.1 | regulatory antisense RNA (NCBI) | compare |
| b3163 | nlpI | +1.2 | 5.8 | hypothetical protein (NCBI) | compare |
| b3784 | rfe | +1.1 | 9.6 | UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase (NCBI) | compare |
| b1130 | phoP | +1.1 | 2.4 | DNA-binding response regulator in two-component regulatory system with PhoQ (NCBI) | compare |
| b3790 | rffC | +1.1 | 6.1 | TDP-fucosamine acetyltransferase (RefSeq) | compare |
| b1480 | sra | +1.1 | 2.5 | 30S ribosomal subunit protein S22 (NCBI) | compare |
| b3183 | obgE | +1.1 | 1.6 | GTPase involved in cell partioning and DNA repair (NCBI) | compare |
| b3786 | rffE | +1.1 | 9.1 | UDP-N-acetyl glucosamine-2-epimerase (NCBI) | compare |
| b3791 | rffA | +1.0 | 7.9 | TDP-4-oxo-6-deoxy-D-glucose transaminase (NCBI) | compare |
| b1778 | yeaA | +1.0 | 3.9 | methionine sulfoxide reductase B (NCBI) | compare |
| b1830 | prc | +1.0 | 5.9 | carboxy-terminal protease for penicillin-binding protein 3 (NCBI) | compare |
| b1642 | slyA | +1.0 | 3.4 | transcriptional regulator for cryptic hemolysin (VIMSS) | compare |
| b1575 | dicB | +1.0 | 2.2 | Qin prophage; cell division inhibition protein (NCBI) | compare |
| b1914 | uvrY | +0.9 | 5.4 | response regulator (NCBI) | compare |
| b0014 | dnaK | +0.9 | 2.0 | molecular chaperone DnaK (NCBI) | compare |
| b3794 | rffM | +0.9 | 7.4 | putative UDP-N-acetyl-D-mannosaminuronic acid transferase (NCBI) | compare |
| b0723 | sdhA | +0.9 | 7.9 | succinate dehydrogenase flavoprotein subunit (NCBI) | compare |
| b3236 | mdh | +0.9 | 7.7 | malate dehydrogenase (NCBI) | compare |
| b4481 | rffT | +0.9 | 6.2 | 4-alpha-L-fucosyltransferase (NCBI) | compare |
| b4139 | aspA | +0.9 | 6.7 | aspartate ammonia-lyase (aspartase) (VIMSS) | compare |
| b3787 | rffD | +0.8 | 6.8 | UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase (NCBI) | compare |
| b0580 | ybdJ | +0.8 | 2.0 | predicted inner membrane protein (NCBI) | compare |
| b1824 | yobF | +0.8 | 2.4 | hypothetical protein (NCBI) | compare |
| b3472 | b3472 | +0.8 | 6.0 | orf, hypothetical protein (VIMSS) | compare |
| b1949 | fliQ | +0.8 | 2.2 | flagellar biosynthesis protein Q (NCBI) | compare |
| b0724 | sdhB | +0.8 | 5.0 | succinate dehydrogenase, FeS subunit (NCBI) | compare |
| b0721 | sdhC | +0.8 | 3.2 | succinate dehydrogenase cytochrome b556 large membrane subunit (NCBI) | compare |
| b3035 | tolC | +0.8 | 5.2 | outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) | compare |
| b0632 | dacA | +0.8 | 5.2 | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5) (NCBI) | compare |
| b1048 | mdoG | +0.8 | 4.7 | glucan biosynthesis protein, periplasmic (NCBI) | compare |
| b3644 | yicC | +0.7 | 4.9 | hypothetical protein (NCBI) | compare |
| b3363 | ppiA | +0.7 | 5.6 | peptidyl-prolyl cis-trans isomerase A (rotamase A) (NCBI) | compare |
| b2262 | menB | +0.7 | 3.4 | naphthoate synthase (NCBI) | compare |
| b4217 | ytfK | +0.7 | 4.3 | orf, hypothetical protein (VIMSS) | compare |
| b2786 | barA | +0.7 | 6.8 | hybrid sensory histidine kinase, in two-component regulatory system with UvrY (NCBI) | compare |
| b4041 | plsB | +0.7 | 2.3 | glycerol-3-phosphate acyltransferase (VIMSS) | compare |
| b0728 | sucC | +0.7 | 4.3 | succinyl-CoA synthetase subunit beta (NCBI) | compare |
| b2741 | rpoS | +0.7 | 4.4 | RNA polymerase sigma factor (NCBI) | compare |
| b1506 | yneL | +0.7 | 1.3 | predicted transcriptional regulator (NCBI) | compare |
| b4065 | yjcE | +0.7 | 5.7 | predicted cation/proton antiporter (NCBI) | compare |
| b1708 | nlpC | +0.7 | 2.7 | predicted lipoprotein (NCBI) | compare |
| b4520 | ymgF | +0.7 | 1.3 | hypothetical protein (NCBI) | compare |
| b1049 | mdoH | +0.7 | 4.9 | glucosyltransferase MdoH (NCBI) | compare |
| b1618 | uidR | +0.7 | 3.5 | DNA-binding transcriptional repressor (NCBI) | compare |
| b1307 | pspD | +0.7 | 1.9 | peripheral inner membrane phage-shock protein (NCBI) | compare |
| b4503 | yafF | +0.6 | 0.6 | no description | compare |
| b2260 | menE | +0.6 | 5.0 | O-succinylbenzoic acid--CoA ligase (NCBI) | compare |
| b1063 | yceB | +0.6 | 2.5 | predicted lipoprotein (NCBI) | compare |
| b0729 | sucD | +0.6 | 1.9 | succinyl-CoA synthetase subunit alpha (NCBI) | compare |
| b1233 | ychJ | +0.6 | 3.6 | hypothetical protein (NCBI) | compare |
| b0145 | dksA | +0.6 | 2.3 | DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein (NCBI) | compare |
| b4426 | isrA | +0.6 | 1.4 | unknown RNA (NCBI) | compare |
| b4702 | mgtL | +0.6 | 1.4 | regulatory leader peptide for mgtA (NCBI) | compare |
| b1724 | ydiZ | +0.6 | 2.2 | hypothetical protein (NCBI) | compare |
| b0059 | hepA | +0.6 | 5.4 | ATP-dependent helicase HepA (NCBI) | compare |
| b0912 | ihfB | +0.6 | 1.8 | integration host factor subunit beta (NCBI) | compare |
| b1601 | ydgG | +0.6 | 3.3 | predicted inner membrane protein (NCBI) | compare |
| b1853 | yebK | +0.6 | 1.4 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b4431 | rprA | +0.6 | 1.8 | Positive regulatory sRNA for RpoS translation; non-essential gene (RefSeq) | compare |
| b3026 | qseC | +0.6 | 2.7 | sensory histidine kinase in two-component regulatory system with QseB (NCBI) | compare |
| b3198 | kdsC | +0.6 | 2.0 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (NCBI) | compare |
| b2625 | yfjI | +0.6 | 1.1 | CP4-57 prophage; predicted protein (NCBI) | compare |
| b1760 | ynjH | +0.6 | 2.0 | hypothetical protein (NCBI) | compare |
| b2264 | menD | +0.6 | 3.8 | 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase (NCBI) | compare |
| b3962 | udhA | +0.5 | 3.7 | putative oxidoreductase (VIMSS) | compare |
| b4402 | yjjY | +0.5 | 0.6 | hypothetical protein (NCBI) | compare |
| b1189 | dadA | +0.5 | 3.6 | D-amino acid dehydrogenase (quinone) DadA (EC 1.4.5.1) (from data) | compare |
| b1217 | chaB | +0.5 | 0.6 | cation transport regulator (NCBI) | compare |
| b1190 | dadX | +0.5 | 2.5 | alanine racemase (NCBI) | compare |
| b1205 | ychH | +0.5 | 1.4 | predicted inner membrane protein (NCBI) | compare |
| b2642 | yfjW | +0.5 | 0.7 | CP4-57 prophage; predicted inner membrane protein (NCBI) | compare |
| b3950 | frwB | +0.5 | 2.3 | predicted enzyme IIB component of PTS (NCBI) | compare |
| b1263 | trpD | +0.5 | 1.7 | bifunctional indole-3-glycerol-phosphate synthase/anthranilate phosphoribosyltransferase (NCBI) | compare |
| b1160 | elbA | +0.5 | 0.6 | hypothetical protein (NCBI) | compare |
| b0388 | aroL | +0.5 | 2.7 | shikimate kinase II (NCBI) | compare |
| b1446 | ydcY | +0.5 | 1.5 | hypothetical protein (NCBI) | compare |
| b0908 | aroA | +0.5 | 3.4 | 3-phosphoshikimate 1-carboxyvinyltransferase (NCBI) | compare |
| b4480 | hdfR | +0.5 | 2.3 | transcriptional regulator HdfR (NCBI) | compare |
| b2362 | yfdS | +0.5 | 2.2 | CPS-53 (KpLE1) prophage; predicted protein (NCBI) | compare |
| b2444 | yffM | +0.5 | 1.0 | CPZ-55 prophage; predicted protein (NCBI) | compare |
| b0530 | sfmA | +0.5 | 1.8 | putative fimbrial-like protein (VIMSS) | compare |
| b2684 | mprA | +0.5 | 1.8 | DNA-binding transcriptional repressor of microcin B17 synthesis and multidrug efflux (NCBI) | compare |
| b0739 | tolA | +0.5 | 1.9 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b1946 | fliN | +0.5 | 1.5 | flagellar motor switch protein (NCBI) | compare |
| b1891 | flhC | +0.5 | 1.7 | DNA-binding transcriptional dual regulator with FlhD (NCBI) | compare |
| b0613 | citG | +0.5 | 1.4 | triphosphoribosyl-dephospho-CoA transferase (NCBI) | compare |
| b0556 | rzpD | +0.5 | 1.9 | DLP12 prophage; predicted murein endopeptidase (NCBI) | compare |
| b1540 | ydfH | +0.5 | 0.9 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b0998 | torD | +0.5 | 0.9 | chaperone protein TorD (NCBI) | compare |
| b0720 | gltA | +0.5 | 2.9 | citrate synthase (NCBI) | compare |
| b2136 | yohD | +0.5 | 2.2 | orf, hypothetical protein (VIMSS) | compare |
| b4071 | nrfB | +0.4 | 2.2 | formate-dependent nitrite reductase; a penta-haeme cytochrome c (VIMSS) | compare |
| b3264 | envR | +0.4 | 2.0 | DNA-binding transcriptional regulator (NCBI) | compare |
| b2579 | yfiD | +0.4 | 1.3 | pyruvate formate lyase subunit (NCBI) | compare |
| b3636 | rpmG | +0.4 | 0.7 | 50S ribosomal protein L33 (NCBI) | compare |
| b3930 | menA | +0.4 | 3.9 | 1,4-dihydroxy-2-naphthoate octaprenyltransferase (NCBI) | compare |
| b1347 | ydaC | +0.4 | 0.3 | Rac prophage; predicted protein (NCBI) | compare |
| b2003 | yeeT | +0.4 | 1.6 | CP4-44 prophage; predicted protein (NCBI) | compare |
| b3146 | yraL | +0.4 | 2.8 | predicted methyltransferase (NCBI) | compare |
| b0830 | yliB | +0.4 | 2.8 | predicted peptide transporter subunit: periplasmic-binding component of ABC superfamily (NCBI) | compare |
| b1598 | ydgD | +0.4 | 1.7 | predicted peptidase (NCBI) | compare |
| b1823 | cspC | +0.4 | 0.8 | stress protein, member of the CspA-family (NCBI) | compare |
| b2258 | b2258 | +0.4 | 0.8 | putative transport/receptor protein (VIMSS) | compare |
| b1671 | ydhX | +0.4 | 1.7 | predicted 4Fe-4S ferridoxin-type protein (RefSeq) | compare |
| b2493 | yfgO | +0.4 | 2.7 | predicted inner membrane protein (NCBI) | compare |
| b3099 | yqjE | +0.4 | 2.9 | conserved inner membrane protein (NCBI) | compare |
| b1411 | ynbD | +0.4 | 2.4 | predicted phosphatase, inner membrane protein (NCBI) | compare |
| b0113 | pdhR | +0.4 | 2.7 | transcriptional regulator of pyruvate dehydrogenase complex (NCBI) | compare |
| b2539 | hcaF | +0.4 | 2.4 | 3-phenylpropionate dioxygenase, small (beta) subunit (NCBI) | compare |
| b2248 | yfaX | +0.4 | 0.8 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b3611 | yibN | +0.4 | 2.0 | predicted rhodanese-related sulfurtransferase (NCBI) | compare |
| b4181 | yjfI | +0.4 | 1.7 | hypothetical protein (NCBI) | compare |
| b1904 | yecR | +0.4 | 1.9 | hypothetical protein (NCBI) | compare |
| b2217 | rcsB | +0.4 | 2.6 | DNA-binding response regulator in two-component regulatory system with RcsC and YojN (NCBI) | compare |
| b2744 | surE | +0.4 | 2.7 | acid phosphatase (NCBI) | compare |
| b1679 | sufE | +0.4 | 1.7 | cysteine desufuration protein SufE (NCBI) | compare |
| b0440 | hupB | +0.4 | 2.6 | HU, DNA-binding transcriptional regulator, beta subunit (NCBI) | compare |
| b4408 | csrB | +0.4 | 1.0 | CsrA-binding sRNA, antagonizing CsrA regulation (NCBI) | compare |
| b1520 | b1520 | +0.4 | 1.5 | orf, hypothetical protein (VIMSS) | compare |
| b3785 | wzzE | +0.4 | 3.1 | putative transport protein (VIMSS) | compare |
| b4172 | hfq | +0.4 | 0.4 | RNA-binding protein Hfq (NCBI) | compare |
| b1171 | b1171 | +0.4 | 1.2 | orf, hypothetical protein (VIMSS) | compare |
| b1572 | ydfB | +0.4 | 0.9 | orf, hypothetical protein (VIMSS) | compare |
| b0866 | ybjQ | +0.4 | 0.8 | hypothetical protein (NCBI) | compare |
| b3623 | rfaK | +0.4 | 0.9 | lipopolysaccharide core biosynthesis (NCBI) | compare |
| b3098 | yqjD | +0.4 | 1.7 | hypothetical protein (NCBI) | compare |
| b4651 | yibW | +0.4 | 0.2 | no description | compare |
| b2156 | lysP | +0.4 | 2.9 | lysine transporter (NCBI) | compare |
| b0685 | ybfE | +0.4 | 1.4 | orf, hypothetical protein (VIMSS) | compare |
| b2261 | menC | +0.4 | 2.5 | O-succinylbenzoate synthase (NCBI) | compare |
| b1429 | tehA | +0.4 | 0.6 | potassium-tellurite ethidium and proflavin transporter (NCBI) | compare |
| b1392 | paaE | +0.4 | 2.3 | predicted multicomponent oxygenase/reductase subunit for phenylacetic acid degradation (NCBI) | compare |
| b3032 | cpdA | +0.4 | 2.6 | cyclic 3',5'-adenosine monophosphate phosphodiesterase (NCBI) | compare |
| b3764 | yifE | +0.4 | 2.2 | hypothetical protein (NCBI) | compare |
| b0951 | pqiB | +0.4 | 2.8 | paraquat-inducible protein B (NCBI) | compare |
| b0379 | yaiY | +0.4 | 1.5 | predicted inner membrane protein (NCBI) | compare |
| b1164 | ycgZ | +0.4 | 0.7 | hypothetical protein (NCBI) | compare |
| b4450 | arcZ | +0.4 | 1.2 | sRNA antisense regulator of tpx and sdaA, Hfq-dependent (RefSeq) | compare |
| b3100 | yqjK | +0.4 | 1.5 | hypothetical protein (NCBI) | compare |
| b1346 | ydaQ | +0.4 | 0.6 | orf, hypothetical protein (VIMSS) | compare |
| b0722 | sdhD | +0.4 | 1.8 | succinate dehydrogenase cytochrome b556 small membrane subunit (NCBI) | compare |
| b4529 | ydbJ | +0.4 | 0.5 | hypothetical protein (NCBI) | compare |
| b2700 | ygaD | +0.4 | 1.3 | competence damage-inducible protein A (NCBI) | compare |
| b1357 | ydaS | +0.4 | 1.0 | Rac prophage; predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2794 | yqcD | +0.4 | 2.4 | hypothetical protein (NCBI) | compare |
| b0018 | mokC | +0.4 | 0.8 | regulatory protein for HokC, overlaps CDS of hokC (NCBI) | compare |
| b0696 | kdpC | +0.4 | 1.0 | potassium-transporting ATPase subunit C (NCBI) | compare |
| b2749 | ygbE | +0.4 | 2.1 | conserved inner membrane protein (NCBI) | compare |
| b4260 | pepA | +0.4 | 2.9 | leucyl aminopeptidase (NCBI) | compare |
| b3271 | yhdZ | +0.4 | 2.1 | predicted amino-acid transporter subunit (NCBI) | compare |
| b2182 | bcr | +0.4 | 1.9 | bicyclomycin/multidrug efflux system (NCBI) | compare |
| b1251 | yciI | +0.4 | 1.3 | orf, hypothetical protein (VIMSS) | compare |
| b4280 | yjhC | +0.3 | 2.4 | putative dehydrogenase (VIMSS) | compare |
| b1134 | ymfB | +0.3 | 1.0 | bifunctional thiamin pyrimidine pyrophosphate hydrolase/ thiamin pyrophosphate hydrolase (NCBI) | compare |
| b0210 | yafE | +0.3 | 1.3 | predicted S-adenosyl-L-methionine-dependent methyltransferase (NCBI) | compare |
| b2468 | aegA | +0.3 | 2.4 | fused predicted oxidoreductase: FeS binding subunit/NAD/FAD-binding subunit (NCBI) | compare |
| b1712 | ihfA | +0.3 | 0.8 | integration host factor subunit alpha (NCBI) | compare |
| b2322 | yfcJ | +0.3 | 2.2 | predicted transporter (NCBI) | compare |
| b3194 | yrbE | +0.3 | 2.7 | predicted toluene transporter subunit: membrane component of ABC superfamily (NCBI) | compare |
| b0310 | ykgH | +0.3 | 0.5 | predicted inner membrane protein (NCBI) | compare |
| b1865 | nudB | +0.3 | 0.8 | dATP pyrophosphohydrolase (NCBI) | compare |
| b1607 | ydgC | +0.3 | 0.6 | conserved inner membrane protein associated with alginate biosynthesis (NCBI) | compare |
| b1626 | b1626 | +0.3 | 1.9 | orf, hypothetical protein (VIMSS) | compare |
| b3243 | aaeR | +0.3 | 1.8 | predicted DNA-binding transcriptional regulator, efflux system (NCBI) | compare |
| b1945 | fliM | +0.3 | 1.9 | flagellar motor switch protein M (NCBI) | compare |
| b2169 | fruB | +0.3 | 2.5 | fused fructose-specific PTS enzymes: IIA component/HPr component (NCBI) | compare |
| b3928 | yiiU | +0.3 | 1.9 | hypothetical protein (NCBI) | compare |
| b1644 | b1644 | +0.3 | 1.4 | putative membrane protein (VIMSS) | compare |
| b2477 | nlpB | +0.3 | 1.4 | lipoprotein-34 (VIMSS) | compare |
| b2750 | cysC | +0.3 | 2.0 | adenylylsulfate kinase (NCBI) | compare |
| b4111 | proP | +0.3 | 2.7 | proline/glycine betaine transporter (NCBI) | compare |
| b2236 | yfaE | +0.3 | 1.6 | predicted 2Fe-2S cluster-containing protein (NCBI) | compare |
| b4246 | pyrL | +0.3 | 0.8 | pyrBI operon leader peptide (NCBI) | compare |
| b1622 | malY | +0.3 | 1.6 | bifunctional beta-cystathionase, PLP-dependent/ regulator of maltose regulon (NCBI) | compare |
| b1172 | ymgG | +0.3 | 2.0 | conserved protein, UPF0757 family (RefSeq) | compare |
| b0125 | hpt | +0.3 | 1.6 | hypoxanthine phosphoribosyltransferase (VIMSS) | compare |
| b4698 | mgrR | +0.3 | 1.3 | sRNA antisense regulator down regulates YgdQ and EptB, PhoPQ-regulated, Hfq-dependent; affects sensitivity to antimicrobial peptides (RefSeq) | compare |
| b1836 | yebV | +0.3 | 1.5 | orf, hypothetical protein (VIMSS) | compare |
| b1661 | cfa | +0.3 | 2.2 | cyclopropane fatty acyl phospholipid synthase (unsaturated-phospholipid methyltransferase) (NCBI) | compare |
| b1639 | ydhA | +0.3 | 2.0 | orf, hypothetical protein (VIMSS) | compare |
| b2189 | proL | +0.3 | 0.8 | tRNA-Pro (NCBI) | compare |
| b1804 | rnd | +0.3 | 1.8 | ribonuclease D (NCBI) | compare |
| b2457 | cchA | +0.3 | 1.5 | detox protein (VIMSS) | compare |
| b1802 | yeaW | +0.3 | 1.5 | predicted 2Fe-2S cluster-containing protein (NCBI) | compare |
| b3563 | yiaB | +0.3 | 1.5 | orf, hypothetical protein (VIMSS) | compare |
| b1082 | flgK | +0.3 | 1.6 | flagellar hook-associated protein K (NCBI) | compare |
| b3462 | ftsX | +0.3 | 1.6 | predicted transporter subunit: membrane component of ABC superfamily (NCBI) | compare |
| b4175 | hflC | +0.3 | 2.5 | modulator for HflB protease specific for phage lambda cII repressor (NCBI) | compare |
| b3153 | yhbO | +0.3 | 1.6 | orf, hypothetical protein (VIMSS) | compare |
| b2808 | gcvA | +0.3 | 1.4 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b2366 | dsdA | +0.3 | 1.8 | D-serine dehydratase (NCBI) | compare |
| b4704 | arrS | +0.3 | 0.1 | Antisense sRNA ArrS, function unknown (NCBI) | compare |
| b0549 | ybcO | +0.3 | 1.2 | DLP12 prophage; predicted protein (NCBI) | compare |
| b2500 | purN | +0.3 | 1.1 | phosphoribosylglycinamide formyltransferase (NCBI) | compare |
| b1187 | fadR | +0.3 | 1.2 | fatty acid metabolism regulator (NCBI) | compare |
| b1244 | oppB | +0.3 | 1.9 | oligopeptide permease ABC transporter membrane protein (NCBI) | compare |