Experiment set17IT039 for Pseudomonas putida KT2440

Soil Extract with Trisodium citrate dihydrate 10 mM; 30C

Group: carbon source
Media: Soil Extract + Trisodium citrate dihydrate (10 mM)
Culturing: Putida_ML5_PNNL, tube, Aerobic, at 30 (C)
By: Rob Egbert on 11/7/19

Specific Phenotypes

For 14 genes in this experiment

For carbon source Trisodium citrate dihydrate in Pseudomonas putida KT2440

For carbon source Trisodium citrate dihydrate across organisms

SEED Subsystems

Subsystem	#Specific
Molybdenum cofactor biosynthesis	5
Nitrate and nitrite ammonification	5
Transport of Molybdenum	2

Metabolic Maps

Color code by fitness: see overview map or list of maps.

Maps containing gene(s) with specific phenotypes:

• Nitrogen metabolism
• Puromycin biosynthesis
• Lipopolysaccharide biosynthesis

MetaCyc Pathways

Pathways that contain genes with specific phenotypes:

Pathway	#Steps	#Present	#Specific
alkylnitronates degradation	2	2	1
nitrate reduction V (assimilatory)	2	1	1
molybdopterin biosynthesis	6	4	2