Experiment set17IT021 for Pseudomonas simiae WCS417

Compare to:

Carbon source L-Citrulline 5 mM

200 most important genes:

  gene name fitness t score description  
PS417_00185 -4.9 -4.7 tryptophan synthase subunit beta compare
PS417_25715 -4.8 -5.4 anthranilate phosphoribosyltransferase compare
PS417_23800 -4.7 -13.7 ketol-acid reductoisomerase compare
PS417_18585 -4.6 -6.3 3-isopropylmalate dehydrogenase compare
PS417_25725 -4.6 -20.1 anthranilate synthase component I compare
PS417_01575 -4.6 -6.3 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
PS417_18600 -4.5 -3.4 isopropylmalate isomerase compare
PS417_23805 -4.3 -5.9 acetolactate synthase 3 regulatory subunit compare
PS417_23995 -4.3 -1.6 preprotein translocase subunit SecG compare
PS417_27135 -4.1 -1.6 glutamine synthetase compare
PS417_01565 -4.1 -8.6 imidazole glycerol phosphate synthase compare
PS417_18560 -4.0 -10.5 N-(5'-phosphoribosyl)anthranilate isomerase compare
PS417_04420 -4.0 -8.3 histidinol dehydrogenase compare
PS417_26740 -4.0 -9.0 homoserine acetyltransferase compare
PS417_26745 -3.8 -9.2 methionine biosynthesis protein MetW compare
PS417_17580 -3.8 -6.7 citrulline utilization hydrolase (from data) conserved
PS417_27040 -3.8 -4.4 3-phosphoglycerate dehydrogenase compare
PS417_23810 -3.8 -9.5 acetolactate synthase 3 catalytic subunit compare
PS417_27435 -3.7 -8.5 polyphosphate kinase compare
PS417_25720 -3.6 -6.6 anthranilate synthase component II compare
PS417_23900 -3.5 -11.3 poly(A) polymerase compare
PS417_17585 -3.5 -7.3 ornithine cyclodeaminase conserved
PS417_07640 -3.4 -3.8 glyceraldehyde-3-phosphate dehydrogenase compare
PS417_18595 -3.4 -5.6 3-isopropylmalate dehydratase compare
PS417_23950 -3.4 -3.2 polynucleotide phosphorylase/polyadenylase compare
PS417_04415 -3.4 -6.5 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
PS417_01855 -3.4 -3.8 phosphoribosyl-AMP cyclohydrolase compare
PS417_02510 -3.3 -4.2 ATP phosphoribosyltransferase regulatory subunit compare
PS417_26040 -3.3 -6.0 malate synthase compare
PS417_18310 -3.3 -2.5 hypothetical protein compare
PS417_01850 -3.3 -4.9 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
PS417_23110 -3.2 -9.1 2-isopropylmalate synthase compare
PS417_27795 -3.2 -1.2 orotate phosphoribosyltransferase compare
PS417_08125 -3.1 -1.2 prephenate dehydratase compare
PS417_18530 -3.1 -5.2 O-succinylhomoserine sulfhydrylase compare
PS417_02175 -3.0 -2.9 transcriptional regulator compare
PS417_02415 -2.9 -5.6 phosphoserine phosphatase compare
PS417_26995 -2.8 -8.5 phosphoserine phosphatase compare
PS417_16465 -2.7 -7.7 sirohydrochlorin ferrochelatase compare
PS417_20985 -2.7 -1.9 porin compare
PS417_12290 -2.7 -7.3 sulfite reductase compare
PS417_17590 -2.7 -2.3 ABC transporter substrate-binding protein compare
PS417_01570 -2.7 -2.5 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
PS417_27300 -2.7 -1.4 cell division protein ZapA compare
PS417_04365 -2.7 -2.0 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase compare
PS417_26890 -2.6 -4.9 dihydroxy-acid dehydratase compare
PS417_12855 -2.6 -5.4 3-phosphoshikimate 1-carboxyvinyltransferase compare
PS417_17595 -2.5 -5.0 amino acid ABC transporter permease compare
PS417_03560 -2.4 -2.5 GTP-binding protein compare
PS417_17605 -2.4 -6.6 amino acid transporter conserved
PS417_17600 -2.4 -9.1 amino acid ABC transporter permease compare
PS417_25710 -2.3 -1.4 indole-3-glycerol-phosphate synthase compare
PS417_00180 -2.3 -2.8 tryptophan synthase subunit alpha compare
PS417_01920 -2.2 -1.3 ATP-dependent protease subunit HslV compare
PS417_20160 -2.2 -5.6 cysteine synthase compare
PS417_09085 -2.1 -1.6 hypothetical protein compare
PS417_17505 -2.1 -4.8 LuxR family transcriptional regulator compare
PS417_17610 -2.0 -1.8 AsnC family transcriptional regulator compare
PS417_27640 -2.0 -1.9 TetR family transcriptional regulator compare
PS417_01580 -2.0 -2.0 imidazole glycerol phosphate synthase compare
PS417_23770 -2.0 -2.6 exodeoxyribonuclease V subunit alpha compare
PS417_21750 -2.0 -13.4 acetyl-CoA synthetase compare
PS417_24585 -1.9 -8.7 AMP nucleosidase compare
PS417_01210 -1.9 -9.3 hypothetical protein compare
PS417_21655 -1.9 -1.4 aspartate kinase compare
PS417_18055 -1.8 -1.5 general secretion pathway protein GspK compare
PS417_04500 -1.8 -2.1 hypothetical protein compare
PS417_01560 -1.8 -2.4 imidazoleglycerol-phosphate dehydratase compare
PS417_17415 -1.8 -6.8 histidine kinase compare
PS417_16570 -1.8 -7.9 isocitrate lyase compare
PS417_21680 -1.8 -4.5 succinylglutamate desuccinylase compare
PS417_04385 -1.7 -3.4 organic solvent ABC transporter substrate-binding protein compare
PS417_20125 -1.7 -2.4 phosphoribosylglycinamide formyltransferase compare
PS417_26985 -1.7 -6.1 phosphoenolpyruvate-protein phosphotransferase compare
PS417_17215 -1.6 -2.5 peptidylprolyl isomerase compare
PS417_04380 -1.6 -1.3 ABC transporter permease compare
PS417_21430 -1.6 -2.4 3-oxoacyl-ACP synthase compare
PS417_27835 -1.6 -5.2 endoribonuclease compare
PS417_22385 -1.6 -6.8 quinolinate synthase A compare
PS417_03925 -1.6 -5.8 nicotinate-nucleotide pyrophosphorylase compare
PS417_27605 -1.5 -4.8 hypothetical protein compare
PS417_06370 -1.5 -1.8 cold-shock protein compare
PS417_23025 -1.5 -5.0 murein transglycosylase compare
PS417_08730 -1.5 -1.5 cytochrome C compare
PS417_24460 -1.5 -2.9 hypothetical protein compare
PS417_16490 -1.5 -1.9 cell division protein FtsK compare
PS417_22445 -1.4 -3.8 ATP-dependent DNA helicase RuvB compare
PS417_17470 -1.4 -2.9 LuxR family transcriptional regulator compare
PS417_24765 -1.4 -3.5 membrane protein compare
PS417_07575 -1.4 -4.5 multifunctional fatty acid oxidation complex subunit alpha compare
PS417_10015 -1.4 -1.4 hypothetical protein compare
PS417_14980 -1.4 -1.5 universal stress protein UspA compare
PS417_04650 -1.4 -1.3 D-alanine--D-alanine ligase compare
PS417_01950 -1.4 -3.9 malate dehydrogenase compare
PS417_27875 -1.4 -6.2 histidine kinase compare
PS417_17460 -1.4 -6.1 Quinoprotein ethanol dehydrogenase QedA (EC 1.1.2.8) (from data) compare
PS417_17420 -1.3 -5.0 ethanol oxidation regulatory protein ercA (from data) compare
PS417_06540 -1.3 -1.8 membrane protein compare
PS417_24710 -1.3 -6.5 lipoprotein compare
PS417_08245 -1.3 -1.1 CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3- dehydrase reductase compare
PS417_07455 -1.3 -2.4 glutamine amidotransferase compare
PS417_06530 -1.3 -2.7 membrane protein compare
PS417_02690 -1.3 -4.3 N-acylglucosamine 2-epimerase compare
PS417_00650 -1.2 -0.9 LysR family transcriptional regulator compare
PS417_17475 -1.2 -4.2 histidine kinase compare
PS417_28070 -1.2 -6.5 phosphate ABC transporter ATP-binding protein compare
PS417_21210 -1.2 -1.8 amidotransferase compare
PS417_03380 -1.2 -1.0 hypothetical protein compare
PS417_22565 -1.2 -1.0 formyltetrahydrofolate deformylase compare
PS417_02280 -1.2 -1.4 GlcNAc-PI de-N-acetylase compare
PS417_02555 -1.2 -7.8 exoribonuclease R compare
PS417_03080 -1.2 -2.1 hypothetical protein compare
PS417_27610 -1.2 -2.3 hypothetical protein compare
PS417_03300 -1.2 -3.1 alanine acetyltransferase compare
PS417_04270 -1.2 -4.6 ribonuclease G compare
PS417_16510 -1.1 -3.7 Clp protease ClpX compare
PS417_26900 -1.1 -1.4 L-cystine transporter tcyP compare
PS417_15890 -1.1 -2.0 RNA polymerase sigma factor compare
PS417_07870 -1.1 -2.1 hypothetical protein compare
PS417_20025 -1.1 -1.8 alpha-ribazole phosphatase compare
PS417_12310 -1.1 -5.1 methionine synthase compare
PS417_27585 -1.1 -1.3 diaminopimelate epimerase compare
PS417_15085 -1.1 -3.5 ATPase AAA compare
PS417_04595 -1.1 -2.3 cell division protein MraZ compare
PS417_01290 -1.1 -1.6 ADP-ribose diphosphatase compare
PS417_05165 -1.1 -2.0 cytosol aminopeptidase compare
PS417_19415 -1.1 -2.1 allantoinase compare
PS417_07710 -1.1 -3.1 membrane protein compare
PS417_18690 -1.1 -2.4 aromatic amino acid aminotransferase compare
PS417_22210 -1.1 -2.0 AraC family transcriptional regulator compare
PS417_08540 -1.0 -2.1 RNA helicase compare
PS417_10985 -1.0 -0.9 NADH:flavin oxidoreductase compare
PS417_18360 -1.0 -2.1 hypothetical protein compare
PS417_22450 -1.0 -1.1 ATP-dependent DNA helicase RuvA compare
PS417_16990 -1.0 -4.7 acyl-CoA dehydrogenase compare
PS417_04410 -1.0 -1.4 hypothetical protein compare
PS417_27515 -1.0 -3.7 heme biosynthesis protein HemY compare
PS417_21125 -1.0 -3.9 phosphoadenosine phosphosulfate reductase compare
PS417_26420 -1.0 -1.5 hypothetical protein compare
PS417_21700 -1.0 -3.9 arginine N-succinyltransferase compare
PS417_08045 -1.0 -1.8 uracil permease compare
PS417_27035 -1.0 -2.7 FAD-linked oxidase compare
PS417_21690 -1.0 -3.1 N-succinylarginine dihydrolase compare
PS417_22300 -1.0 -1.4 LTXXQ domain protein compare
PS417_01715 -1.0 -1.5 hypothetical protein compare
PS417_05570 -1.0 -3.0 DeoR faimly transcriptional regulator compare
PS417_14805 -0.9 -1.5 AraC family transcriptional regulator compare
PS417_25940 -0.9 -4.8 pyrroloquinoline quinone biosynthesis protein PqqE compare
PS417_19965 -0.9 -5.7 histidine kinase compare
PS417_27520 -0.9 -3.5 uroporphyrin-III methyltransferase compare
PS417_13490 -0.9 -1.9 hypothetical protein compare
PS417_26695 -0.9 -1.3 uracil phosphoribosyltransferase compare
PS417_04875 -0.9 -1.2 molybdenum cofactor biosynthesis protein MoaE compare
PS417_09460 -0.9 -2.4 alkanesulfonate monooxygenase compare
PS417_03525 -0.9 -1.3 hypothetical protein compare
PS417_21510 -0.9 -1.5 histidine kinase compare
PS417_21330 -0.9 -3.6 L-arabinose transporter ATP-binding protein compare
PS417_24155 -0.9 -1.5 ATP-binding protein compare
PS417_14075 -0.9 -1.6 hypothetical protein compare
PS417_15100 -0.9 -1.8 BatB protein compare
PS417_26250 -0.9 -2.3 peptidase M19 compare
PS417_10720 -0.9 -3.6 chemotaxis protein CheY compare
PS417_15285 -0.9 -1.0 type VI secretion protein compare
PS417_04390 -0.9 -2.9 toluene tolerance protein compare
PS417_02225 -0.9 -1.5 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase compare
PS417_17110 -0.9 -2.7 spore coat protein compare
PS417_07120 -0.9 -3.0 RNA polymerase sigma-H factor compare
PS417_12650 -0.9 -1.8 magnesium transporter compare
PS417_28080 -0.9 -5.7 phosphate ABC transporter permease compare
PS417_04055 -0.9 -2.7 peptide transporter compare
PS417_14315 -0.8 -1.7 2,5-dioxovalerate dehydrogenase compare
PS417_09930 -0.8 -1.4 hypothetical protein compare
PS417_23890 -0.8 -2.5 ATPase compare
PS417_24810 -0.8 -4.6 aldehyde dehydrogenase compare
PS417_17455 -0.8 -1.7 cytochrome C compare
PS417_13870 -0.8 -2.0 hypothetical protein compare
PS417_07995 -0.8 -3.4 LOG family protein compare
PS417_11150 -0.8 -4.0 porin compare
PS417_01095 -0.8 -1.0 amino acid ABC transporter ATP-binding protein compare
PS417_02670 -0.8 -1.8 ABC transporter compare
PS417_02990 -0.8 -1.7 hypothetical protein compare
PS417_26335 -0.8 -1.6 BetI family transcriptional regulator compare
PS417_21395 -0.8 -4.0 radical SAM protein compare
PS417_05500 -0.8 -1.8 2,3-diketo-5-methylthio-1-phosphopentane phosphatase compare
PS417_18590 -0.8 -2.4 SAM-dependent methyltransferase compare
PS417_13620 -0.8 -1.2 thermostable hemolysin compare
PS417_20855 -0.8 -0.5 hypothetical protein compare
PS417_24630 -0.8 -1.7 ATP-binding protein compare
PS417_28515 -0.8 -2.0 16S rRNA methyltransferase compare
PS417_05830 -0.8 -1.5 hypothetical protein compare
PS417_01485 -0.8 -3.8 ABC transporter permease compare
PS417_22495 -0.8 -2.2 histidine triad (HIT) protein compare
PS417_25975 -0.8 -3.5 Acyl-CoA dehydrogenase (EC 1.3.8.7) (from data) compare
PS417_19275 -0.8 -0.8 hypothetical protein compare
PS417_06895 -0.8 -1.9 DNA-binding protein compare
PS417_23135 -0.8 -1.1 GTP-binding protein compare
PS417_06945 -0.8 -0.8 membrane protein compare
PS417_21710 -0.8 -2.2 Succinylornithine transaminase (EC 2.6.1.81) (from data) compare
PS417_00915 -0.8 -2.0 aminotransferase compare
PS417_01285 -0.7 -1.1 haloacid dehalogenase compare


Specific Phenotypes

For 6 genes in this experiment

For carbon source L-Citrulline in Pseudomonas simiae WCS417

For carbon source L-Citrulline across organisms