Experiment set17IT020 for Pseudomonas simiae WCS417

Compare to:

Carbon source L-Citrulline 10 mM

200 most important genes:

  gene name fitness t score description  
PS417_01855 -4.4 -4.3 phosphoribosyl-AMP cyclohydrolase compare
PS417_25720 -4.3 -7.8 anthranilate synthase component II compare
PS417_18560 -4.2 -12.3 N-(5'-phosphoribosyl)anthranilate isomerase compare
PS417_06375 -3.9 -1.4 deoxycytidine triphosphate deaminase compare
PS417_02175 -3.8 -4.0 transcriptional regulator compare
PS417_04415 -3.7 -8.8 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
PS417_18600 -3.7 -3.3 isopropylmalate isomerase compare
PS417_21430 -3.6 -3.1 3-oxoacyl-ACP synthase compare
PS417_23810 -3.6 -11.1 acetolactate synthase 3 catalytic subunit compare
PS417_17580 -3.6 -4.8 citrulline utilization hydrolase (from data) conserved
PS417_23800 -3.5 -14.0 ketol-acid reductoisomerase compare
PS417_01575 -3.5 -5.3 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
PS417_25725 -3.5 -13.2 anthranilate synthase component I compare
PS417_18585 -3.4 -5.0 3-isopropylmalate dehydrogenase compare
PS417_26740 -3.4 -7.2 homoserine acetyltransferase compare
PS417_27040 -3.4 -4.1 3-phosphoglycerate dehydrogenase compare
PS417_26995 -3.2 -8.4 phosphoserine phosphatase compare
PS417_20125 -3.1 -3.0 phosphoribosylglycinamide formyltransferase compare
PS417_08125 -3.1 -1.1 prephenate dehydratase compare
PS417_12855 -3.1 -6.1 3-phosphoshikimate 1-carboxyvinyltransferase compare
PS417_02510 -2.9 -4.7 ATP phosphoribosyltransferase regulatory subunit compare
PS417_18530 -2.9 -3.9 O-succinylhomoserine sulfhydrylase compare
PS417_18595 -2.9 -3.9 3-isopropylmalate dehydratase compare
PS417_27435 -2.9 -6.5 polyphosphate kinase compare
PS417_04420 -2.8 -10.6 histidinol dehydrogenase compare
PS417_25715 -2.8 -5.7 anthranilate phosphoribosyltransferase compare
PS417_16465 -2.8 -6.9 sirohydrochlorin ferrochelatase compare
PS417_20985 -2.7 -1.9 porin compare
PS417_12290 -2.7 -7.5 sulfite reductase compare
PS417_26890 -2.7 -8.5 dihydroxy-acid dehydratase compare
PS417_23110 -2.7 -9.7 2-isopropylmalate synthase compare
PS417_17585 -2.7 -6.9 ornithine cyclodeaminase conserved
PS417_01565 -2.6 -3.0 imidazole glycerol phosphate synthase compare
PS417_23900 -2.6 -12.1 poly(A) polymerase compare
PS417_00185 -2.6 -4.5 tryptophan synthase subunit beta compare
PS417_25710 -2.6 -1.9 indole-3-glycerol-phosphate synthase compare
PS417_17605 -2.5 -7.7 amino acid transporter conserved
PS417_00180 -2.5 -3.8 tryptophan synthase subunit alpha compare
PS417_02415 -2.5 -5.2 phosphoserine phosphatase compare
PS417_01850 -2.5 -5.2 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
PS417_23805 -2.4 -2.7 acetolactate synthase 3 regulatory subunit compare
PS417_17595 -2.3 -6.9 amino acid ABC transporter permease compare
PS417_22520 -2.3 -2.7 histidine kinase compare
PS417_27835 -2.3 -8.1 endoribonuclease compare
PS417_01580 -2.3 -1.9 imidazole glycerol phosphate synthase compare
PS417_17600 -2.2 -9.4 amino acid ABC transporter permease compare
PS417_17590 -2.2 -2.2 ABC transporter substrate-binding protein compare
PS417_04365 -2.2 -1.9 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase compare
PS417_01570 -2.1 -1.4 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
PS417_23995 -2.1 -1.3 preprotein translocase subunit SecG compare
PS417_16570 -2.0 -8.7 isocitrate lyase compare
PS417_26745 -2.0 -4.5 methionine biosynthesis protein MetW compare
PS417_18690 -1.9 -4.7 aromatic amino acid aminotransferase compare
PS417_27135 -1.9 -1.2 glutamine synthetase compare
PS417_24155 -1.9 -2.2 ATP-binding protein compare
PS417_01920 -1.9 -1.4 ATP-dependent protease subunit HslV compare
PS417_17610 -1.8 -1.3 AsnC family transcriptional regulator compare
PS417_26335 -1.8 -3.0 BetI family transcriptional regulator compare
PS417_21750 -1.8 -10.8 acetyl-CoA synthetase compare
PS417_27875 -1.8 -6.4 histidine kinase compare
PS417_23770 -1.7 -2.5 exodeoxyribonuclease V subunit alpha compare
PS417_07640 -1.7 -3.9 glyceraldehyde-3-phosphate dehydrogenase compare
PS417_10675 -1.7 -1.4 TetR family transcriptional regulator compare
PS417_02560 -1.7 -1.7 23S rRNA methyltransferase compare
PS417_17455 -1.7 -2.5 cytochrome C compare
PS417_20160 -1.7 -3.4 cysteine synthase compare
PS417_07575 -1.7 -4.8 multifunctional fatty acid oxidation complex subunit alpha compare
PS417_26040 -1.6 -5.0 malate synthase compare
PS417_24765 -1.6 -3.2 membrane protein compare
PS417_07170 -1.6 -4.0 hypothetical protein compare
PS417_04380 -1.6 -1.2 ABC transporter permease compare
PS417_01560 -1.5 -2.4 imidazoleglycerol-phosphate dehydratase compare
PS417_07470 -1.5 -2.0 hypothetical protein compare
PS417_24585 -1.5 -8.4 AMP nucleosidase compare
PS417_11400 -1.5 -2.1 phosphoglycerate mutase compare
PS417_01950 -1.5 -5.8 malate dehydrogenase compare
PS417_04385 -1.5 -3.5 organic solvent ABC transporter substrate-binding protein compare
PS417_21680 -1.5 -2.7 succinylglutamate desuccinylase compare
PS417_04390 -1.5 -3.0 toluene tolerance protein compare
PS417_01210 -1.4 -6.6 hypothetical protein compare
PS417_03925 -1.4 -3.7 nicotinate-nucleotide pyrophosphorylase compare
PS417_07710 -1.4 -4.4 membrane protein compare
PS417_23025 -1.4 -6.1 murein transglycosylase compare
PS417_22385 -1.4 -6.6 quinolinate synthase A compare
PS417_04180 -1.4 -2.9 GntR family transcriptional regulator compare
PS417_08540 -1.4 -2.5 RNA helicase compare
PS417_26770 -1.4 -2.3 tRNA (guanine-N7)-methyltransferase compare
PS417_18310 -1.3 -2.0 hypothetical protein compare
PS417_17415 -1.3 -2.8 histidine kinase compare
PS417_08730 -1.2 -1.2 cytochrome C compare
PS417_26985 -1.2 -3.1 phosphoenolpyruvate-protein phosphotransferase compare
PS417_28070 -1.2 -5.1 phosphate ABC transporter ATP-binding protein compare
PS417_10095 -1.2 -2.3 hypothetical protein compare
PS417_27605 -1.2 -5.3 hypothetical protein compare
PS417_13425 -1.2 -2.8 cupin compare
PS417_00925 -1.2 -1.4 hypothetical protein compare
PS417_11510 -1.2 -1.8 AraC family transcriptional regulator compare
PS417_01490 -1.2 -5.2 ABC transporter permease compare
PS417_11845 -1.2 -4.5 RpiR family transcriptional regulator compare
PS417_17420 -1.2 -6.8 ethanol oxidation regulatory protein ercA (from data) compare
PS417_01290 -1.2 -1.0 ADP-ribose diphosphatase compare
PS417_17795 -1.2 -1.6 ABC transporter permease compare
PS417_17475 -1.1 -6.3 histidine kinase compare
PS417_27585 -1.1 -1.8 diaminopimelate epimerase compare
PS417_05865 -1.1 -2.0 hypothetical protein compare
PS417_26120 -1.1 -2.0 hypothetical protein compare
PS417_06245 -1.1 -1.6 zinc metallopeptidase RseP compare
PS417_12565 -1.1 -2.1 2-dehydro-3-deoxygluconokinase compare
PS417_27520 -1.1 -3.3 uroporphyrin-III methyltransferase compare
PS417_02555 -1.1 -7.1 exoribonuclease R compare
PS417_04375 -1.1 -1.7 ABC transporter ATP-binding protein compare
PS417_20635 -1.1 -1.1 ABC transporter ATP-binding protein compare
PS417_27035 -1.1 -3.0 FAD-linked oxidase compare
PS417_00075 -1.1 -2.0 hypothetical protein compare
PS417_04270 -1.1 -7.2 ribonuclease G compare
PS417_03300 -1.1 -2.7 alanine acetyltransferase compare
PS417_24370 -1.0 -0.8 (2Fe-2S)-binding protein compare
PS417_07115 -1.0 -6.5 L-aspartate oxidase compare
PS417_20025 -1.0 -1.6 alpha-ribazole phosphatase compare
PS417_18105 -1.0 -1.4 iron-dicitrate transporter substrate-binding subunit compare
PS417_09150 -1.0 -2.3 energy transducer TonB compare
PS417_02485 -1.0 -2.6 tRNA delta(2)-isopentenylpyrophosphate transferase compare
PS417_17755 -1.0 -2.2 hypothetical protein compare
PS417_20140 -1.0 -2.4 nucleoprotein/polynucleotide-associated enzyme compare
PS417_17425 -1.0 -3.0 hypothetical protein compare
PS417_23135 -1.0 -1.6 GTP-binding protein compare
PS417_21695 -1.0 -2.2 succinylglutamate-semialdehyde dehydrogenase compare
PS417_22445 -1.0 -1.9 ATP-dependent DNA helicase RuvB compare
PS417_12390 -1.0 -0.9 hypothetical protein compare
PS417_08155 -1.0 -1.6 integration host factor subunit beta compare
PS417_17460 -1.0 -4.3 Quinoprotein ethanol dehydrogenase QedA (EC 1.1.2.8) (from data) compare
PS417_21000 -1.0 -1.4 CrfX protein compare
PS417_07565 -1.0 -1.7 hypothetical protein compare
PS417_22565 -1.0 -0.8 formyltetrahydrofolate deformylase compare
PS417_20785 -1.0 -2.4 transcriptional regulator compare
PS417_14600 -0.9 -1.9 bleomycin resistance protein compare
PS417_10995 -0.9 -1.9 GntR family transcriptional regulator compare
PS417_26645 -0.9 -1.5 chemotaxis protein compare
PS417_16990 -0.9 -4.6 acyl-CoA dehydrogenase compare
PS417_27515 -0.9 -3.2 heme biosynthesis protein HemY compare
PS417_12110 -0.9 -1.4 ATP-binding protein compare
PS417_19335 -0.9 -1.7 isochorismatase compare
PS417_01485 -0.9 -5.2 ABC transporter permease compare
PS417_17505 -0.9 -2.5 LuxR family transcriptional regulator compare
PS417_01095 -0.9 -1.1 amino acid ABC transporter ATP-binding protein compare
PS417_06395 -0.9 -1.0 amino acid transporter compare
PS417_21710 -0.9 -1.2 Succinylornithine transaminase (EC 2.6.1.81) (from data) compare
PS417_24710 -0.9 -4.2 lipoprotein compare
PS417_17490 -0.9 -2.1 ABC transporter ATP-binding protein compare
PS417_02690 -0.9 -2.8 N-acylglucosamine 2-epimerase compare
PS417_17480 -0.9 -4.0 branched-chain amino acid ABC transporter substrate-binding protein compare
PS417_13185 -0.8 -1.4 RND transporter compare
PS417_14075 -0.8 -1.6 hypothetical protein compare
PS417_02280 -0.8 -1.4 GlcNAc-PI de-N-acetylase compare
PS417_05570 -0.8 -3.6 DeoR faimly transcriptional regulator compare
PS417_12695 -0.8 -3.5 mannitol dehydrogenase compare
PS417_06200 -0.8 -2.8 protein-PII uridylyltransferase compare
PS417_27870 -0.8 -2.7 ATP-dependent DNA helicase RecG compare
PS417_03260 -0.8 -1.2 5S ribosomal RNA compare
PS417_28080 -0.8 -5.9 phosphate ABC transporter permease compare
PS417_03705 -0.8 -2.6 2-alkenal reductase compare
PS417_24810 -0.8 -4.2 aldehyde dehydrogenase compare
PS417_11300 -0.8 -2.0 general secretion pathway protein GspE compare
PS417_05535 -0.8 -1.7 Fis family transcriptional regulator compare
PS417_11925 -0.8 -1.2 hypothetical protein compare
PS417_06030 -0.8 -1.4 hypothetical protein compare
PS417_18470 -0.8 -1.8 hypothetical protein compare
PS417_15770 -0.7 -1.0 pyridoxine 5'-phosphate oxidase compare
PS417_19195 -0.7 -1.8 hypothetical protein compare
PS417_19965 -0.7 -5.2 histidine kinase compare
PS417_21700 -0.7 -1.9 arginine N-succinyltransferase compare
PS417_24905 -0.7 -3.2 DNA-binding protein compare
PS417_04875 -0.7 -0.9 molybdenum cofactor biosynthesis protein MoaE compare
PS417_04650 -0.7 -0.8 D-alanine--D-alanine ligase compare
PS417_26510 -0.7 -3.2 5,10-methylenetetrahydrofolate reductase compare
PS417_00510 -0.7 -0.6 membrane protein compare
PS417_24705 -0.7 -1.5 D-alanyl-D-alanine carboxypeptidase compare
PS417_07560 -0.7 -1.0 universal stress protein UspA compare
PS417_27195 -0.7 -0.8 N-acetylglutamate synthase compare
PS417_17650 -0.7 -1.5 proteinase compare
PS417_11930 -0.7 -3.6 hypothetical protein compare
PS417_20535 -0.7 -3.2 peptidylprolyl isomerase compare
PS417_16490 -0.7 -1.0 cell division protein FtsK compare
PS417_16275 -0.7 -1.4 hypothetical protein compare
PS417_00370 -0.7 -0.7 hypothetical protein compare
PS417_27305 -0.7 -3.2 5-formyltetrahydrofolate cyclo-ligase compare
PS417_12195 -0.7 -3.3 ABC transporter permease compare
PS417_00045 -0.7 -1.2 glycerol acyltransferase compare
PS417_22570 -0.7 -0.5 H-NS histone compare
PS417_08110 -0.7 -2.6 methylthioribose-1-phosphate isomerase compare
PS417_07420 -0.7 -1.2 restriction endonuclease compare
PS417_25975 -0.7 -2.6 Acyl-CoA dehydrogenase (EC 1.3.8.7) (from data) compare
PS417_17925 -0.7 -1.7 acyl-CoA dehydrogenase compare
PS417_21380 -0.7 -1.9 GntR family transcriptional regulator compare
PS417_09915 -0.7 -1.3 hypothetical protein compare
PS417_05975 -0.7 -0.5 chemotaxis protein CheW compare
PS417_01715 -0.7 -0.8 hypothetical protein compare
PS417_14925 -0.7 -2.3 2-methylcitrate dehydratase compare
PS417_14245 -0.7 -1.2 hypothetical protein compare
PS417_25940 -0.7 -3.1 pyrroloquinoline quinone biosynthesis protein PqqE compare


Specific Phenotypes

For 6 genes in this experiment

For carbon source L-Citrulline in Pseudomonas simiae WCS417

For carbon source L-Citrulline across organisms