Experiment set16S286 for Agrobacterium fabrum C58

Compare to:

AgroPhage_H10

200 most important genes:

  gene name fitness t score description  
Atu0777 -4.5 -1.2 hypothetical protein compare
Atu1030 -3.8 -1.8 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu3598 -3.5 -1.6 thiol:disulfide interchange protein compare
Atu2684 -3.5 -1.6 hypothetical protein compare
Atu6098 -2.2 -0.8 transcriptional regulator, HTH family compare
Atu1687 -2.2 -7.0 anthranilate phosphoribosyltransferase compare
Atu1688 -2.0 -5.4 indole-3-glycerol-phosphate synthase compare
Atu3009 -2.0 -1.2 exopolysaccharide production protein compare
Atu3299 -1.9 -3.0 hypothetical protein compare
Atu2464 -1.8 -2.6 formyltetrahydrofolate deformylase compare
Atu8096 -1.7 -1.4 hypothetical protein compare
Atu0017 -1.6 -3.3 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu2484 -1.4 -1.4 hypothetical protein compare
Atu3604 -1.4 -2.3 hypoxanthine phosphoribosyltransferase compare
Atu8056 -1.4 -1.0 hypothetical protein compare
Atu0039 -1.3 -1.6 imidazoleglycerol-phosphate synthase cyclase compare
Atu1503 -1.3 -0.9 hypothetical protein compare
Atu0331 -1.3 -1.7 sigma-54 modulation protein compare
Atu0399 -1.3 -2.7 dihydroorotase compare
Atu0641 -1.3 -2.5 hypothetical protein compare
Atu2184 -1.3 -2.9 transcriptional regulator, AsnC family compare
Atu3579 -1.3 -2.3 lactoylglutathione lyase compare
Atu1307 -1.3 -2.7 dihydroorotase compare
Atu8018 -1.3 -0.8 hypothetical protein compare
Atu1446 -1.3 -1.0 two component response regulator compare
Atu3740 -1.2 -4.1 fructose bisphosphate aldolase compare
Atu0400 -1.2 -2.2 orotate phosphoribosyltransferase compare
Atu4161 -1.2 -1.2 hypothetical protein compare
Atu6189 -1.2 -1.4 protein secretion chaperone compare
Atu1223 -1.2 -1.2 hypothetical protein compare
Atu1469 -1.1 -1.0 hypothetical protein compare
Atu1566 -1.1 -0.9 hypothetical protein compare
Atu8158 -1.1 -2.0 hypothetical protein compare
Atu1810 -1.1 -0.8 hypothetical protein compare
Atu1853 -1.1 -1.9 hypothetical protein compare
Atu4589 -1.1 -2.8 transmembrane transport protein compare
Atu3014 -1.1 -1.7 hypothetical protein compare
Atu1325 -1.1 -0.8 acetyltransferase compare
Atu2115 -1.1 -4.2 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
Atu4518 -1.1 -3.2 branched chain amino acid ABC transporter permease compare
Atu0533 -1.0 -1.0 putative inhibitor of septum formation compare
Atu0107 -1.0 -1.0 hypothetical protein compare
Atu8054 -1.0 -0.7 hypothetical protein compare
Atu8029 -1.0 -1.1 hypothetical protein compare
Atu3342 -1.0 -3.2 trehalose utilization-like protein compare
Atu0434 -1.0 -1.0 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu2617 -1.0 -2.1 chemotaxis protein compare
Atu1844 -1.0 -1.5 Phosphoribosylformylglycinamidine synthetase compare
Atu1902 -1.0 -2.3 transketolase compare
Atu1694 -0.9 -2.0 hypothetical protein compare
Atu4139 -0.9 -1.1 hypothetical protein compare
Atu8191 -0.9 -1.2 hypothetical protein compare
Atu4586 -0.9 -2.5 choloylglycine hydrolase family protein compare
Atu0142 -0.9 -1.5 cytochrome o ubiquinol oxidase subunit II compare
Atu0051 -0.9 -2.5 two component sensor kinase compare
Atu2289 -0.9 -5.7 anthranilate synthase component I and II compare
Atu1636 -0.9 -2.4 hypothetical protein compare
Atu4468 -0.9 -3.0 iron transport ABC transporter permease compare
Atu8165 -0.9 -1.1 hypothetical protein compare
Atu5114 -0.9 -2.5 hypothetical protein compare
Atu1219 -0.8 -0.6 hypothetical protein compare
Atu5470 -0.8 -1.5 hypothetical protein compare
Atu1686 -0.8 -5.0 peptidyl-prolyl cis-trans isomerse D compare
Atu1952 -0.8 -0.7 hypothetical protein compare
Atu5430 -0.8 -0.9 hypothetical protein compare
Atu4407 -0.8 -1.8 periplasmic nitrate reductase, NapD protein compare
Atu0040 -0.8 -0.5 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu0762 -0.8 -1.9 hypothetical protein compare
Atu2555 -0.8 -1.0 L-lysine 2,3-aminomutase compare
Atu2201 -0.8 -1.2 hydrolase compare
Atu0101 -0.8 -2.2 cytochrome c compare
Atu0463 -0.8 -1.7 hypothetical protein compare
Atu1110 -0.8 -1.0 cytosol aminopeptidase compare
Atu2205 -0.8 -1.5 transcriptional regulator, MarR family compare
Atu0225 -0.8 -0.6 hypothetical protein compare
Atu1752 -0.8 -1.5 hypothetical protein compare
Atu2113 -0.8 -0.7 N-acetylmuramoyl-L-alanine amidase compare
Atu5028 -0.8 -2.0 IS426 transposase compare
Atu3110 -0.8 -2.8 hypothetical protein compare
Atu0769 -0.8 -0.7 protoheme IX farnesyltransferase compare
Atu2270 -0.7 -0.8 ATP-dependent Clp protease, proteolytic subunit compare
Atu1558 -0.7 -2.3 permease compare
Atu1308 -0.7 -1.5 aspartate carbamoyl transferase catalytic subunit compare
Atu5145 -0.7 -1.8 acetyltransferase compare
Atu4630 -0.7 -1.5 hypothetical protein compare
Atu2352 -0.7 -0.6 hypothetical protein compare
Atu3663 -0.7 -0.6 hypothetical protein compare
Atu3469 -0.7 -0.8 phosphoglyceromutase compare
Atu0972 -0.7 -2.6 lipA protein compare
Atu0508 -0.7 -1.5 PH Adaption potassium efflux system compare
Atu4393 -0.7 -2.3 3-octaprenyl-4-hydroxybenzoate carboxy-lyase compare
Atu3885 -0.7 -2.7 inositol monophosphatase compare
Atu1501 -0.7 -1.8 hypothetical protein compare
Atu6153 -0.7 -1.2 conserved hypothetical protein compare
Atu1588 -0.7 -3.4 homoserine dehydrogenase compare
Atu8154 -0.7 -2.1 Plasmid stabilization system protein compare
Atu1685 -0.7 -0.5 hypothetical protein compare
Atu6009 -0.7 -2.6 indole-3-lactate synthase compare
Atu1973 -0.7 -2.5 hypothetical protein compare
Atu2567 -0.7 -2.0 thiamin biosynthesis protein ThiG compare
Atu2650 -0.7 -3.1 glycerol-3-phosphate dehydrogenase compare
Atu0678 -0.7 -1.6 histidyl-tRNA synthetase compare
Atu3511 -0.7 -1.3 glutaredoxin compare
Atu5475 -0.7 -1.1 hypothetical protein compare
Atu4452 -0.7 -1.6 hypothetical protein compare
Atu2236 -0.7 -2.3 adenine phosphoribosyltransferase compare
Atu3095 -0.7 -1.7 hypothetical protein compare
Atu0030 -0.6 -0.6 phosphocarrier protein HPr compare
Atu1980 -0.6 -1.5 hypothetical protein compare
Atu2059 -0.6 -3.0 transcriptional regulator, TetR family compare
Atu0770 -0.6 -2.2 cytochrome C oxidase assembly protein compare
Atu4839 -0.6 -2.7 C factor compare
Atu1026 -0.6 -1.0 hypothetical protein compare
Atu1464 -0.6 -1.8 glycine cleavage system T protein, aminomethyltransferase compare
Atu2740 -0.6 -1.4 transcriptional regulator, GntR family compare
Atu4443 -0.6 -2.7 hypothetical protein compare
Atu8117 -0.6 -1.2 hypothetical protein compare
Atu3215 -0.6 -1.5 oligopeptide ABC transporter ATPase compare
Atu3115 -0.6 -1.7 TetR family transcriptional regulator compare
Atu1039 -0.6 -1.2 DNA repair protein RecO compare
Atu8039 -0.6 -1.7 hypothetical protein compare
Atu2124 -0.6 -1.8 transcriptional regulator, ArsR family compare
Atu1525 -0.6 -1.4 hypothetical protein compare
Atu4471 -0.6 -2.5 ABC transporter substrate-binding protein compare
Atu3084 -0.6 -1.8 RNA polymerase sigma factor compare
Atu1639 -0.6 -1.6 hypothetical protein compare
Atu1021 -0.6 -0.7 outer membrane protein compare
Atu3999 -0.6 -1.3 dithiobiotin synthetase compare
Atu2204 -0.6 -0.6 hypothetical protein compare
Atu3150 -0.6 -2.3 sugar ABC transporter permease compare
Atu0188 -0.6 -1.4 ABC transporter, membrane spanning protein (peptide) compare
Atu1260 -0.6 -0.7 hypothetical protein compare
Atu2192 -0.6 -0.6 hypothetical protein compare
Atu0540 -0.6 -1.9 hypothetical protein compare
Atu5163 -0.6 -1.5 type IV secretion protein AvhB2 compare
Atu3505 -0.6 -2.4 3-hydroxyisobutyryl-CoA hydrolase compare
Atu0093 -0.6 -1.6 Recombination protein compare
Atu4677 -0.6 -0.6 hypothetical protein compare
Atu8087 -0.6 -0.3 putative peptidoglycan binding protein compare
Atu0117 -0.6 -1.8 hypothetical protein compare
Atu3482 -0.6 -2.2 pantoate--beta-alanine ligase compare
Atu3339 -0.6 -2.3 trehalose/maltose ABC transporter permease compare
Atu0815 -0.6 -1.8 hypothetical protein compare
Atu5109 -0.6 -1.1 conjugal transfer protein compare
Atu1874 -0.6 -0.7 RecA protein compare
Atu1472 -0.6 -1.8 hydrolase compare
Atu0723 -0.5 -0.7 FAD dependent oxidoreductase compare
Atu0773 -0.5 -1.7 surfeit 1 compare
Atu2465 -0.5 -1.7 two component sensor kinase compare
Atu5130 -0.5 -1.7 attachment protein compare
Atu1638 -0.5 -1.8 hypothetical protein compare
Atu0696 -0.5 -1.6 phosphatase compare
Atu0482 -0.5 -2.3 polysaccharide deacetylase compare
Atu3688 -0.5 -1.2 iron(III ABC transporter permease dicitrate ABC transporter permease compare
Atu2146 -0.5 -1.6 hypothetical protein compare
Atu3328 -0.5 -1.7 aldehyde dehydrogenase compare
Atu0976 -0.5 -0.6 cycL protein compare
Atu4747 -0.5 -1.9 sugar ABC transporter permease compare
Atu4093 -0.5 -1.0 hypothetical protein compare
Atu0938 -0.5 -1.0 transcriptional regulator, MerR family compare
Atu4798 -0.5 -2.3 hypothetical protein compare
Atu0677 -0.5 -1.1 hypothetical protein compare
Atu0231 -0.5 -1.7 GMP synthase compare
Atu3120 -0.5 -0.4 hypothetical protein compare
Atu4823 -0.5 -1.9 acetyl-CoA acetyltransferase compare
Atu1846 -0.5 -0.6 hypothetical protein compare
Atu4803 -0.5 -1.6 two component response regulator compare
Atu0786 -0.5 -1.7 peptidase, family M16 compare
Atu0050 -0.5 -1.6 two component response regulator compare
Atu1535 -0.5 -0.5 cytochrome c oxidase, FixQ chain compare
Atu3861 -0.5 -1.4 acyl-CoA hydrolase compare
Atu0086 -0.5 -0.4 ribosome-binding factor A compare
Atu1125 -0.5 -1.2 ABC transporter, membrane spanning protein compare
Atu4514 -0.5 -1.5 RpiR family transcriptional regulator compare
Atu1364 -0.5 -1.3 ATP-dependent Clp protease, ATP-binding subunit compare
Atu3608 -0.5 -1.4 hypothetical protein compare
Atu1437 -0.5 -1.6 hypothetical protein compare
Atu0795 -0.5 -0.4 hypothetical protein compare
Atu3032 -0.5 -0.9 hypothetical protein compare
Atu3653 -0.5 -1.8 hypothetical protein compare
Atu1546 -0.5 -1.3 transcriptional regulator, MerR family compare
Atu6173 -0.5 -1.3 component of type IV secretion system compare
Atu4847 -0.5 -2.4 ribokinase compare
Atu4072 -0.5 -0.6 nodulation protein N compare
Atu5486 -0.5 -2.1 hypothetical protein compare
Atu2441 -0.5 -0.8 RNA methylase compare
Atu0983 -0.5 -0.8 hypothetical protein compare
Atu4819 -0.5 -1.5 hypothetical protein compare
Atu4706 -0.5 -1.2 formate dehydrogenase subunit gamma compare
Atu4540 -0.5 -0.6 protocatechuate 3,4-dioxygenase subunit beta compare
Atu1708 -0.5 -1.6 hypothetical protein compare
Atu4040 -0.5 -0.9 hypothetical protein compare
Atu4025 -0.5 -1.3 ferrichrome ABC transporter ATPase compare
Atu5026 -0.5 -1.4 hypothetical protein compare
Atu1516 -0.5 -1.9 hypothetical protein compare
Atu4470 -0.5 -1.7 iron ABC transporter ATPase compare
Atu3291 -0.5 -1.5 Lpr family transcriptional regulator compare
Atu0013 -0.5 -2.2 NAD(P)H-flavin oxidoreductase compare
Atu2633 -0.5 -0.7 RhtB family transporter compare
Atu6003 -0.5 -2.5 C compare


Specific Phenotypes

For 38 genes in this experiment