Experiment set16S262 for Agrobacterium fabrum C58

Compare to:

AgroPhage_F10

200 most important genes:

  gene name fitness t score description  
Atu1754 -4.7 -2.4 hypothetical protein compare
Atu0842 -4.1 -2.1 hypothetical protein compare
Atu0421 -4.1 -1.3 ABC transporter, membrane spanning protein compare
Atu0777 -3.3 -1.0 hypothetical protein compare
Atu0556 -3.1 -3.4 hypothetical protein compare
Atu0280 -2.8 -2.1 hypothetical protein compare
Atu6098 -2.8 -0.9 transcriptional regulator, HTH family compare
Atu3121 -2.7 -1.1 cold shock protein compare
Atu0319 -2.7 -1.2 ubiquinone biosynthesis protein compare
Atu2204 -2.6 -1.2 hypothetical protein compare
Atu1182 -2.5 -1.5 hypothetical protein compare
Atu1688 -2.3 -6.2 indole-3-glycerol-phosphate synthase compare
Atu2633 -2.3 -2.1 RhtB family transporter compare
Atu1030 -2.1 -1.1 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu1891 -2.0 -2.8 cobalamin biosynthesis protein compare
Atu3730 -2.0 -1.1 hypothetical protein compare
Atu2640 -2.0 -3.3 hypothetical protein compare
Atu0331 -2.0 -1.7 sigma-54 modulation protein compare
Atu4072 -1.9 -1.1 nodulation protein N compare
Atu1694 -1.9 -2.0 hypothetical protein compare
Atu3122 -1.8 -3.4 cold shock protein compare
Atu3215 -1.8 -3.5 oligopeptide ABC transporter ATPase compare
Atu1466 -1.7 -1.2 hypothetical protein compare
Atu0017 -1.7 -2.5 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu0086 -1.7 -0.7 ribosome-binding factor A compare
Atu3707 -1.7 -1.6 phosphoserine aminotransferase compare
Atu0641 -1.7 -2.2 hypothetical protein compare
Atu2464 -1.6 -2.2 formyltetrahydrofolate deformylase compare
Atu5163 -1.6 -2.6 type IV secretion protein AvhB2 compare
Atu8158 -1.6 -2.3 hypothetical protein compare
Atu3343 -1.6 -3.4 trehalose utilization-like protein compare
Atu2376 -1.6 -1.9 hypothetical protein compare
Atu1687 -1.5 -3.5 anthranilate phosphoribosyltransferase compare
Atu1149 -1.5 -1.1 adenylate cyclase compare
Atu2028 -1.5 -1.5 transcriptional regulator, ArsR family compare
Atu2289 -1.4 -6.9 anthranilate synthase component I and II compare
Atu0815 -1.4 -3.7 hypothetical protein compare
Atu4477 -1.4 -3.4 TetR family transcriptional regulator compare
Atu6036 -1.4 -0.9 entry-exclusion protein compare
Atu3120 -1.4 -0.8 hypothetical protein compare
Atu1634 -1.4 -1.3 hypothetical protein compare
Atu0339 -1.4 -2.3 hypothetical protein compare
Atu0508 -1.3 -2.8 PH Adaption potassium efflux system compare
Atu1446 -1.3 -0.8 two component response regulator compare
Atu1566 -1.3 -0.8 hypothetical protein compare
Atu3579 -1.3 -2.0 lactoylglutathione lyase compare
Atu2017 -1.3 -0.8 hypothetical protein compare
Atu3775 -1.3 -1.4 hypothetical protein compare
Atu0851 -1.3 -3.2 hypothetical protein compare
Atu2352 -1.2 -1.3 hypothetical protein compare
Atu2317 -1.2 -1.9 hypothetical protein compare
Atu8155 -1.2 -2.2 hypothetical protein compare
Atu8191 -1.2 -1.0 hypothetical protein compare
Atu1581 -1.2 -1.1 hypothetical protein compare
Atu1921 -1.2 -2.7 hypothetical protein compare
Atu1573 -1.2 -0.9 hypothetical protein compare
Atu2130 -1.2 -2.6 hypothetical protein compare
Atu2620 -1.1 -0.8 hypothetical protein compare
Atu1686 -1.1 -5.2 peptidyl-prolyl cis-trans isomerse D compare
Atu0225 -1.1 -0.6 hypothetical protein compare
Atu3299 -1.1 -1.7 hypothetical protein compare
Atu0516 -1.1 -2.0 chemotaxis receiver protein compare
Atu2163 -1.1 -0.8 hypothetical protein compare
Atu2335 -1.1 -1.1 hypothetical protein compare
Atu0040 -1.1 -0.6 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu6165 -1.1 -0.7 hypothetical protein compare
Atu0565 -1.1 -1.7 hypothetical protein compare
Atu3757 -1.1 -1.8 hypothetical protein compare
Atu0845 -1.1 -2.6 hypothetical protein compare
Atu1874 -1.1 -1.6 RecA protein compare
Atu4540 -1.1 -1.2 protocatechuate 3,4-dioxygenase subunit beta compare
Atu1968 -1.1 -0.9 hypothetical protein compare
Atu5486 -1.1 -1.8 hypothetical protein compare
Atu0008 -1.0 -2.3 hypothetical protein compare
Atu0662 -1.0 -2.0 transcriptional regulator, GntR family compare
Atu3182 -1.0 -1.0 hypothetical protein compare
Atu3115 -1.0 -2.4 TetR family transcriptional regulator compare
Atu0769 -1.0 -0.7 protoheme IX farnesyltransferase compare
Atu1369 -1.0 -0.8 HIT family protein compare
Atu3336 -1.0 -1.0 hypothetical protein compare
Atu5517 -1.0 -1.7 hypothetical protein compare
Atu0340 -1.0 -1.1 SAM dependent methyltransferase compare
Atu0184 -1.0 -1.2 glucokinase compare
Atu0972 -1.0 -2.4 lipA protein compare
Atu4792 -0.9 -1.3 hypothetical protein compare
Atu8096 -0.9 -0.9 hypothetical protein compare
Atu3518 -0.9 -2.5 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase compare
Atu2293 -0.9 -1.3 hypothetical protein compare
Atu1323 -0.9 -0.9 hypothetical protein compare
Atu2694 -0.9 -1.3 hypothetical protein compare
Atu2184 -0.9 -1.7 transcriptional regulator, AsnC family compare
Atu3324 -0.9 -1.8 hypothetical protein compare
Atu0681 -0.9 -2.9 hypothetical protein compare
Atu1535 -0.9 -0.6 cytochrome c oxidase, FixQ chain compare
Atu1291 -0.9 -0.9 hypothetical protein compare
Atu8162 -0.9 -0.6 hypothetical protein compare
Atu1140 -0.9 -2.0 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu0885 -0.9 -0.9 hypothetical protein compare
Atu3708 -0.9 -3.8 outer surface protein compare
Atu1325 -0.9 -1.0 acetyltransferase compare
Atu1760 -0.9 -0.6 hypothetical protein compare
Atu3619 -0.9 -1.2 hypothetical protein compare
Atu1141 -0.9 -1.5 Phosphoribosylglycinamide synthetase compare
Atu2710 -0.9 -2.3 hypothetical protein compare
Atu4469 -0.9 -0.9 iron ABC transporter permease compare
Atu0126 -0.9 -3.8 membrane lipoprotein compare
Atu0250 -0.9 -2.2 hypothetical protein compare
Atu2806 -0.9 -2.2 hypothetical protein compare
Atu3823 -0.9 -3.2 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase compare
Atu0540 -0.9 -1.7 hypothetical protein compare
Atu3554 -0.9 -1.6 hypothetical protein compare
Atu2344 -0.8 -0.9 lactoylglutathione lyase compare
Atu3159 -0.8 -2.7 3-hydroxyisobutyrate dehydrogenase compare
Atu0749 -0.8 -1.3 biotin synthesis BioY protein compare
Atu1214 -0.8 -2.8 DNA-binding protein compare
Atu0115 -0.8 -0.5 hypothetical protein compare
Atu1380 -0.8 -2.2 zinc metallopeptidase compare
Atu1513 -0.8 -2.4 ABC excinuclease subunit A compare
Atu2140 -0.8 -1.5 hypothetical protein compare
Atu2176 -0.8 -3.5 hypothetical protein compare
Atu3267 -0.8 -1.0 dipeptide ABC transporter permease compare
Atu3428 -0.8 -2.3 hypothetical protein compare
Atu1415 -0.8 -1.8 3-hydroxyacyl-CoA dehydrogenase type II compare
Atu1741 -0.8 -1.4 hypothetical protein compare
Atu2555 -0.8 -0.9 L-lysine 2,3-aminomutase compare
Atu8035 -0.8 -0.9 hypothetical protein compare
Atu3663 -0.8 -0.8 hypothetical protein compare
Atu0703 -0.8 -1.2 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase compare
Atu4466 -0.8 -2.0 oxidoreductase compare
Atu3926 -0.8 -1.9 translation initiation inhibitor compare
Atu4541 -0.8 -1.6 carboxymuconolactone decarboxylase compare
Atu1520 -0.8 -2.0 ABC transporter, nucleotide binding/ATPase protein (zinc) compare
Atu0883 -0.8 -1.4 hypothetical protein compare
Atu4410 -0.8 -1.9 periplasmic nitrate reductase, cytochrome c-type protein compare
Atu8018 -0.8 -0.5 hypothetical protein compare
Atu2059 -0.8 -1.7 transcriptional regulator, TetR family compare
Atu0445 -0.8 -1.4 hypothetical protein compare
Atu3465 -0.8 -1.2 metallo-beta-lactamase superfamily protein compare
Atu5540 -0.8 -0.5 hypothetical protein compare
Atu1191 -0.8 -1.8 hypothetical protein compare
Atu5152 -0.8 -1.8 hypothetical protein compare
Atu1864 -0.8 -2.1 putative homoserine/homoserine lactone efflux protein compare
Atu1628 -0.8 -1.2 hypothetical protein compare
Atu0751 -0.7 -1.4 ABC transporter, nucleotide binding/ATPase protein (cobalt) compare
Atu6009 -0.7 -2.4 indole-3-lactate synthase compare
Atu1445 -0.7 -2.0 two component sensor kinase compare
Atu2040 -0.7 -2.0 phosphoserine phosphatase compare
Atu1301 -0.7 -1.6 hypothetical protein compare
Atu6163 -0.7 -2.5 hypothetical protein compare
Atu4383 -0.7 -1.8 hypothetical protein compare
Atu0609 -0.7 -3.4 ABC transporter, substrate binding protein (putrescine) compare
Atu8087 -0.7 -0.4 putative peptidoglycan binding protein compare
Atu5035 -0.7 -1.8 hypothetical protein compare
Atu0882 -0.7 -3.1 hypothetical protein compare
Atu1009 -0.7 -1.1 hypothetical protein compare
Atu1126 -0.7 -2.2 molybdopterin converting factor, large subunit compare
Atu3460 -0.7 -1.8 RhtB family transporter compare
Atu4518 -0.7 -1.4 branched chain amino acid ABC transporter permease compare
Atu4297 -0.7 -3.0 AraC family transcriptional regulator compare
Atu0939 -0.7 -0.7 PemI protein compare
Atu0812 -0.7 -0.7 hypothetical protein compare
Atu3338 -0.7 -3.1 trehalose/maltose ABC transporter substrate-binding protein compare
Atu0538 -0.7 -1.0 hypothetical protein compare
Atu0861 -0.7 -1.5 hypothetical protein compare
Atu0520 -0.7 -1.5 chemotaxis receiver protein compare
Atu4471 -0.7 -2.4 ABC transporter substrate-binding protein compare
Atu0537 -0.7 -2.1 histidinol dehydrogenase compare
Atu1591 -0.7 -1.6 hypothetical protein compare
Atu0955 -0.7 -1.6 hypothetical protein compare
Atu0422 -0.7 -0.7 ABC transporter, membrane spanning protein compare
Atu2799 -0.7 -1.1 precorrin-6x reductase compare
Atu3406 -0.7 -2.1 hypothetical protein compare
Atu5115 -0.7 -0.5 hypothetical protein compare
Atu2115 -0.7 -3.3 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
Atu4480 -0.7 -2.0 hypothetical protein compare
Atu0318 -0.7 -2.7 hypothetical protein compare
Atu3036 -0.7 -1.2 dipeptide ABC transporter permease compare
Atu1019 -0.7 -1.0 hypothetical protein compare
Atu2808 -0.7 -2.6 cobyric acid synthase compare
Atu3515 -0.7 -1.3 hypothetical protein compare
Atu3613 -0.7 -2.1 hypothetical protein compare
Atu1685 -0.7 -0.4 hypothetical protein compare
Atu0193 -0.7 -1.6 glutamine synthetase compare
Atu0382 -0.7 -1.0 hypothetical protein compare
Atu0292 -0.7 -2.1 iron-sulfur cluster binding protein compare
Atu3603 -0.7 -0.8 two component response regulator compare
Atu8046 -0.7 -1.0 hypothetical protein compare
Atu1863 -0.7 -2.0 permease compare
Atu8023 -0.7 -0.7 hypothetical protein compare
Atu1026 -0.7 -1.0 hypothetical protein compare
Atu2275 -0.7 -1.8 hypothetical protein compare
Atu2267 -0.7 -2.2 hypothetical protein compare
Atu1481 -0.7 -1.5 hypothetical protein compare
Atu5452 -0.7 -2.0 ABC transporter nucleotide binding/ATPase compare
Atu3189 -0.7 -2.2 hypothetical protein compare
Atu4583 -0.7 -1.7 superoxide dismutase compare
Atu0434 -0.7 -0.7 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu2343 -0.6 -1.7 acetyltransferase compare
Atu0795 -0.6 -1.0 hypothetical protein compare
Atu0881 -0.6 -1.8 cytochrome C-556 compare


Specific Phenotypes

For 49 genes in this experiment