Experiment set16S244 for Agrobacterium fabrum C58

Compare to:

AgroPhage_E04

200 most important genes:

  gene name fitness t score description  
Atu0556 -6.3 -4.3 hypothetical protein compare
Atu0876 -4.3 -2.2 superoxide dismutase compare
Atu1026 -4.1 -2.8 hypothetical protein compare
Atu2249 -4.0 -1.2 hypothetical protein compare
Atu0225 -3.9 -1.2 hypothetical protein compare
Atu3183 -3.5 -1.0 hypothetical protein compare
Atu8161 -3.3 -1.4 hypothetical protein compare
Atu1570 -3.3 -1.0 hypothetical protein compare
Atu4072 -3.1 -1.6 nodulation protein N compare
Atu5430 -3.1 -1.6 hypothetical protein compare
Atu2163 -2.9 -1.2 hypothetical protein compare
Atu0488 -2.8 -2.8 hypothetical protein compare
Atu0912 -2.7 -1.1 Na+/H+ antiporter compare
Atu1182 -2.7 -1.8 hypothetical protein compare
Atu2633 -2.6 -1.3 RhtB family transporter compare
Atu3663 -2.6 -1.5 hypothetical protein compare
Atu0723 -2.6 -1.7 FAD dependent oxidoreductase compare
Atu0331 -2.5 -1.4 sigma-54 modulation protein compare
Atu1223 -2.4 -1.4 hypothetical protein compare
Atu1685 -2.1 -0.9 hypothetical protein compare
Atu1518 -2.0 -3.3 transcriptional regulator, Fur family compare
Atu2555 -1.9 -2.6 L-lysine 2,3-aminomutase compare
Atu2442 -1.9 -2.0 hypothetical protein compare
Atu2634 -1.9 -1.5 hypothetical protein compare
Atu3668 -1.8 -2.3 siderophore biosynthesis protein compare
Atu0184 -1.8 -1.5 glucokinase compare
Atu5142 -1.8 -1.7 hypothetical protein compare
Atu0679 -1.8 -3.8 ATP phosphoribosyltransferase compare
Atu6189 -1.8 -1.3 protein secretion chaperone compare
Atu4405 -1.7 -2.5 periplasmic nitrate reductase NapE compare
Atu0153 -1.7 -2.6 transcriptional regulator, Fur family compare
Atu1470 -1.7 -1.0 Camphor resistance protein compare
Atu1952 -1.7 -1.2 hypothetical protein compare
Atu1836 -1.6 -1.3 hypothetical protein compare
Atu2077 -1.6 -1.8 DNA polymerase III, epsilon subunit compare
Atu1971 -1.6 -2.5 hypothetical protein compare
Atu2407 -1.6 -2.2 urease gamma subunit compare
Atu8023 -1.5 -1.4 hypothetical protein compare
Atu4144 -1.5 -0.8 hypothetical protein compare
Atu2662 -1.5 -1.1 acetyltransferase compare
Atu1687 -1.5 -3.7 anthranilate phosphoribosyltransferase compare
Atu2800 -1.5 -2.5 precorrin-3B C17-methyltransferase compare
Atu1688 -1.5 -2.9 indole-3-glycerol-phosphate synthase compare
Atu8096 -1.5 -1.1 hypothetical protein compare
Atu2317 -1.4 -3.2 hypothetical protein compare
Atu8054 -1.4 -0.7 hypothetical protein compare
Atu1103 -1.4 -1.8 rRNA-adenine N6,N6-dimethyltransferase compare
Atu2554 -1.4 -1.2 lysyl-tRNA synthetase compare
Atu2130 -1.4 -2.2 hypothetical protein compare
Atu3598 -1.4 -0.7 thiol:disulfide interchange protein compare
Atu2201 -1.4 -2.1 hydrolase compare
Atu3252 -1.4 -2.9 GntR family transcriptional regulator compare
Atu3317 -1.4 -1.6 hypothetical protein compare
Atu6173 -1.3 -2.6 component of type IV secretion system compare
Atu1039 -1.3 -2.7 DNA repair protein RecO compare
Atu0640 -1.3 -1.3 hypothetical protein compare
Atu2140 -1.3 -1.9 hypothetical protein compare
Atu6165 -1.3 -1.0 hypothetical protein compare
Atu0972 -1.3 -2.8 lipA protein compare
Atu2045 -1.3 -3.4 HFLK protein compare
Atu1565 -1.3 -1.8 serine acetyltransferase compare
Atu0641 -1.3 -1.9 hypothetical protein compare
Atu1686 -1.2 -6.3 peptidyl-prolyl cis-trans isomerse D compare
Atu0941 -1.2 -0.6 hypothetical protein compare
Atu0346 -1.2 -1.6 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu2073 -1.2 -1.3 membrane protein compare
Atu3608 -1.2 -2.7 hypothetical protein compare
Atu5045 -1.2 -1.3 hypothetical protein compare
Atu1021 -1.2 -0.8 outer membrane protein compare
Atu1232 -1.2 -1.0 hypothetical protein compare
Atu5173 -1.2 -1.0 dehydrogenase compare
Atu1327 -1.2 -1.5 NADH-ubiquinone oxidoreductase compare
Atu0236 -1.1 -1.2 hypothetical protein compare
Atu4389 -1.1 -3.0 nitric oxide reductase, cytochrome c-containing subunit compare
Atu1849 -1.1 -3.0 hypothetical protein compare
Atu5043 -1.1 -2.8 hypothetical protein compare
Atu3518 -1.1 -3.6 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase compare
Atu1581 -1.1 -0.9 hypothetical protein compare
Atu1847 -1.1 -1.0 hypothetical protein compare
Atu0508 -1.1 -2.0 PH Adaption potassium efflux system compare
Atu3427 -1.1 -1.6 hypothetical protein compare
Atu1185 -1.1 -1.8 hypothetical protein compare
Atu3488 -1.1 -2.8 ABC transporter permease compare
Atu2113 -1.1 -1.1 N-acetylmuramoyl-L-alanine amidase compare
Atu3289 -1.1 -1.5 thiamine-phosphate pyrophosphorylase compare
Atu0983 -1.1 -1.9 hypothetical protein compare
Atu2044 -1.1 -3.0 HFLC protein compare
Atu1466 -1.0 -0.8 hypothetical protein compare
Atu3579 -1.0 -1.7 lactoylglutathione lyase compare
Atu0836 -1.0 -1.5 Glutathione-S-transferase compare
Atu8174 -1.0 -2.1 hypothetical protein compare
Atu3173 -1.0 -2.9 sugar ABC transporter permease compare
Atu0377 -1.0 -1.8 hypothetical protein compare
Atu2694 -1.0 -1.4 hypothetical protein compare
Atu5157 -1.0 -2.4 hypothetical protein compare
Atu1878 -1.0 -2.1 hypothetical protein compare
Atu1321 -1.0 -1.4 hypothetical protein compare
Atu1614 -1.0 -3.0 phosphoglycolate phosphatase compare
Atu6036 -1.0 -0.9 entry-exclusion protein compare
Atu1678 -1.0 -2.1 S-adenosylmethionine tRNA ribosyltransferase-isomerase compare
Atu8052 -1.0 -0.7 hypothetical protein compare
Atu6153 -1.0 -2.1 conserved hypothetical protein compare
Atu2380 -1.0 -1.1 hypothetical protein compare
Atu2043 -0.9 -2.9 htrA family protein compare
Atu3387 -0.9 -1.7 sigma factor compare
Atu2289 -0.9 -4.8 anthranilate synthase component I and II compare
Atu8035 -0.9 -0.7 hypothetical protein compare
Atu4586 -0.9 -2.7 choloylglycine hydrolase family protein compare
Atu1891 -0.9 -1.1 cobalamin biosynthesis protein compare
Atu0421 -0.9 -0.5 ABC transporter, membrane spanning protein compare
Atu1358 -0.9 -2.4 hypothetical protein compare
Atu4187 -0.9 -0.7 tRNA-Met compare
Atu3175 -0.9 -2.0 hypothetical protein compare
Atu1217 -0.9 -2.4 cysteine synthase compare
Atu1140 -0.9 -1.4 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu1216 -0.9 -3.0 alanyl-tRNA synthetase compare
Atu1805 -0.9 -2.5 hypothetical protein compare
Atu1127 -0.9 -1.0 molybdopterin converting factor small subunit compare
Atu0245 -0.9 -2.8 transcriptional regulator compare
Atu8147 -0.9 -3.2 hypothetical protein compare
Atu0017 -0.9 -1.2 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu8155 -0.9 -1.8 hypothetical protein compare
Atu8095 -0.9 -2.2 hypothetical protein compare
Atu5451 -0.9 -0.6 hypothetical protein compare
Atu3562 -0.9 -1.5 hypothetical protein compare
Atu2827 -0.9 -1.4 hypothetical protein compare
Atu2378 -0.9 -1.1 hypothetical protein compare
Atu6158 -0.9 -2.9 conserved hypothetical protein compare
Atu1435 -0.9 -1.6 hypothetical protein compare
Atu1921 -0.9 -1.8 hypothetical protein compare
Atu0674 -0.9 -1.7 hypothetical protein compare
Atu0786 -0.9 -1.6 peptidase, family M16 compare
Atu1725 -0.9 -1.1 hypothetical protein compare
Atu0382 -0.8 -1.5 hypothetical protein compare
Atu3733 -0.8 -0.8 hypothetical protein compare
Atu1750 -0.8 -1.4 phosphoribosyl c-AMP cyclohydrolase compare
Atu3089 -0.8 -2.6 spermidine/putrescine ABC transporter ATPase compare
Atu1445 -0.8 -2.0 two component sensor kinase compare
Atu4061 -0.8 -1.3 exopolysaccharide production repressor protein compare
Atu2059 -0.8 -2.4 transcriptional regulator, TetR family compare
Atu2308 -0.8 -2.0 d-beta-hydroxybutyrate dehydrogenase compare
Atu0659 -0.8 -2.4 NTP pyrophosphohydrolase, MutT family compare
Atu0777 -0.8 -0.4 hypothetical protein compare
Atu1221 -0.8 -2.2 hypothetical protein compare
Atu4287 -0.8 -2.7 NonF-like protein compare
Atu2770 -0.8 -2.6 acetoacetyl CoA reductase; poly-beta-hydroxybutyrate biosynthesis compare
Atu1584 -0.8 -2.5 hypothetical protein compare
Atu0237 -0.8 -1.5 hypothetical protein compare
Atu3286 -0.8 -1.7 ABC transporter permease compare
Atu5186 -0.8 -1.2 hypothetical protein compare
Atu2672 -0.8 -2.7 hypothetical protein compare
Atu4094 -0.8 -1.7 hypothetical protein compare
Atu4465 -0.8 -2.3 transcriptional regulator compare
Atu3400 -0.8 -1.1 hypothetical protein compare
Atu4198 -0.8 -1.5 hypothetical protein compare
Atu3757 -0.8 -1.1 hypothetical protein compare
Atu1880 -0.8 -1.1 ABC transporter, membrane spanning protein (amino acid) compare
Atu3365 -0.8 -1.6 hypothetical protein compare
Atu4427 -0.8 -1.9 replicative DNA helicase compare
Atu8145 -0.8 -1.7 hypothetical protein compare
Atu5057 -0.8 -0.8 hypothetical protein compare
Atu0447 -0.8 -1.8 hypothetical protein compare
Atu1480 -0.8 -1.2 hypothetical protein compare
Atu1734 -0.8 -0.9 hypothetical protein compare
Atu8197 -0.8 -2.3 NorF protein compare
Atu8010 -0.8 -1.1 hypothetical protein compare
Atu1333 -0.7 -0.7 outer membrane protein compare
Atu0011 -0.7 -2.1 transcriptional regulator compare
Atu3189 -0.7 -2.6 hypothetical protein compare
Atu0142 -0.7 -1.6 cytochrome o ubiquinol oxidase subunit II compare
Atu3421 -0.7 -2.8 hypothetical protein compare
Atu4223 -0.7 -0.8 sarcosine oxidase delta subunit compare
Atu0197 -0.7 -2.4 ABC transporter, nucleotide binding/ATPase protein (proline/glycine/betaine) compare
Atu4200 -0.7 -1.3 hypothetical protein compare
Atu8189 -0.7 -1.7 hypothetical protein compare
Atu4129 -0.7 -1.9 3-hydroxyisobutyrate dehydrogenase compare
Atu0948 -0.7 -1.7 hypothetical protein compare
Atu0684 -0.7 -1.8 hypothetical protein compare
Atu4541 -0.7 -1.6 carboxymuconolactone decarboxylase compare
Atu0240 -0.7 -1.6 hypothetical protein compare
Atu0537 -0.7 -1.9 histidinol dehydrogenase compare
Atu3510 -0.7 -0.9 amidohydrolase compare
Atu8117 -0.7 -1.4 hypothetical protein compare
Atu2311 -0.7 -2.5 xanthine dehydrogenase chaperone compare
Atu2184 -0.7 -1.8 transcriptional regulator, AsnC family compare
Atu0712 -0.7 -3.2 hypothetical protein compare
Atu2665 -0.7 -1.9 transcriptional regulator, MarR family compare
Atu0879 -0.7 -1.2 RhtB family transporter compare
Atu4753 -0.7 -1.2 amino acid ABC transporter permease compare
Atu0544 -0.7 -0.5 hypothetical protein compare
Atu1482 -0.7 -2.0 hypothetical protein compare
Atu4609 -0.7 -3.0 glycosyltransferase compare
Atu0257 -0.7 -3.4 hypothetical protein compare
Atu1705 -0.7 -1.2 SEC-independent protein translocase protein compare
Atu0267 -0.7 -1.2 hypothetical protein compare
Atu1437 -0.7 -1.7 hypothetical protein compare
Atu3299 -0.7 -1.1 hypothetical protein compare
Atu0647 -0.7 -2.1 phosphoribosylamine--glycine ligase compare
Atu1062 -0.7 -0.6 phosphatidylserine synthase compare
Atu3674 -0.7 -1.1 hypothetical protein compare


Specific Phenotypes

For 39 genes in this experiment