Experiment set16S232 for Agrobacterium fabrum C58

Compare to:

AgroPhage_D04

200 most important genes:

  gene name fitness t score description  
Atu1754 -5.2 -2.6 hypothetical protein compare
Atu5540 -4.5 -1.3 hypothetical protein compare
Atu8054 -4.3 -1.2 hypothetical protein compare
Atu1701 -3.6 -1.9 protein-L-isoaspartate O-methyltransferase compare
Atu6098 -3.3 -1.0 transcriptional regulator, HTH family compare
Atu3443 -3.2 -2.9 hypothetical protein compare
Atu0422 -3.1 -1.5 ABC transporter, membrane spanning protein compare
Atu3517 -2.9 -3.6 acetyltransferase compare
Atu3121 -2.7 -1.0 cold shock protein compare
Atu5164 -2.7 -1.1 type IV secretion protein AvhB3 compare
Atu2620 -2.4 -1.2 hypothetical protein compare
Atu1688 -2.3 -4.6 indole-3-glycerol-phosphate synthase compare
Atu1323 -2.3 -2.1 hypothetical protein compare
Atu0119 -2.2 -1.1 hypothetical protein compare
Atu8087 -2.2 -0.9 putative peptidoglycan binding protein compare
Atu0413 -2.1 -1.8 stress induced protein compare
Atu2352 -2.1 -1.6 hypothetical protein compare
Atu2067 -2.0 -0.8 hypothetical protein compare
Atu5115 -2.0 -1.8 hypothetical protein compare
Atu0086 -2.0 -0.8 ribosome-binding factor A compare
Atu8052 -2.0 -1.1 hypothetical protein compare
Atu1573 -2.0 -1.4 hypothetical protein compare
Atu4053 -2.0 -1.4 succinoglycan biosynthesis protein compare
Atu3429 -1.9 -1.0 hypothetical protein compare
Atu1687 -1.9 -5.2 anthranilate phosphoribosyltransferase compare
Atu1952 -1.9 -1.4 hypothetical protein compare
Atu2633 -1.9 -1.9 RhtB family transporter compare
Atu2059 -1.9 -4.9 transcriptional regulator, TetR family compare
Atu1354 -1.9 -1.1 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase compare
Atu2073 -1.9 -2.3 membrane protein compare
Atu0107 -1.9 -2.2 hypothetical protein compare
Atu1260 -1.8 -1.2 hypothetical protein compare
Atu4540 -1.7 -2.0 protocatechuate 3,4-dioxygenase subunit beta compare
Atu0883 -1.7 -1.6 hypothetical protein compare
Atu0115 -1.7 -0.9 hypothetical protein compare
Atu2692 -1.6 -2.4 intracellular septation protein compare
Atu4469 -1.6 -1.5 iron ABC transporter permease compare
Atu0912 -1.5 -0.7 Na+/H+ antiporter compare
Atu5470 -1.5 -2.2 hypothetical protein compare
Atu2163 -1.4 -0.9 hypothetical protein compare
Atu1686 -1.4 -6.7 peptidyl-prolyl cis-trans isomerse D compare
Atu0040 -1.4 -0.8 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu4437 -1.4 -1.6 LysR family transcriptional regulator compare
Atu0627 -1.4 -3.4 carboxymethylenebutenolidase compare
Atu2083 -1.4 -2.2 DNA repair protein RecN compare
Atu0679 -1.4 -3.3 ATP phosphoribosyltransferase compare
Atu0815 -1.4 -2.3 hypothetical protein compare
Atu8082 -1.4 -1.2 hypothetical protein compare
Atu3510 -1.3 -1.4 amidohydrolase compare
Atu2136 -1.3 -3.0 chromosome partitioning protein compare
Atu4630 -1.3 -2.3 hypothetical protein compare
Atu2289 -1.3 -5.9 anthranilate synthase component I and II compare
Atu3150 -1.3 -2.5 sugar ABC transporter permease compare
Atu2432 -1.3 -1.2 hypothetical protein compare
Atu2433 -1.2 -0.9 hypothetical protein compare
Atu0142 -1.2 -1.7 cytochrome o ubiquinol oxidase subunit II compare
Atu4223 -1.2 -1.1 sarcosine oxidase delta subunit compare
Atu0141 -1.2 -0.9 cytochrome O ubiquinol oxidase subunit I compare
Atu8151 -1.2 -1.1 hypothetical protein compare
Atu1846 -1.2 -0.9 hypothetical protein compare
Atu1644 -1.2 -2.4 hypothetical protein compare
Atu1405 -1.2 -2.5 transcriptional regulator, GntR family compare
Atu0039 -1.2 -1.1 imidazoleglycerol-phosphate synthase cyclase compare
Atu1141 -1.1 -3.1 Phosphoribosylglycinamide synthetase compare
Atu2193 -1.1 -0.6 hypothetical protein compare
Atu4225 -1.1 -3.0 AraC family transcriptional regulator compare
Atu2249 -1.1 -0.7 hypothetical protein compare
Atu0556 -1.1 -2.0 hypothetical protein compare
Atu1897 -1.1 -3.6 short chain dehydrogenase compare
Atu5163 -1.1 -2.3 type IV secretion protein AvhB2 compare
Atu1344 -1.1 -1.1 hypothetical protein compare
Atu1639 -1.1 -3.2 hypothetical protein compare
Atu3707 -1.1 -1.4 phosphoserine aminotransferase compare
Atu4452 -1.1 -2.1 hypothetical protein compare
Atu1449 -1.1 -3.5 potassium uptake protein compare
Atu1023 -1.1 -1.1 hypothetical protein compare
Atu2113 -1.1 -1.5 N-acetylmuramoyl-L-alanine amidase compare
Atu4171 -1.0 -3.7 cold-shock dead-box protein A compare
Atu1729 -1.0 -2.7 putative molybdenum cofactor biosynthesis protein compare
Atu5167 -1.0 -3.1 type IV secretion protein AvhB6 compare
Atu4527 -1.0 -0.9 hypothetical protein compare
Atu1565 -1.0 -1.5 serine acetyltransferase compare
Atu4228 -1.0 -3.4 formyl-methanofuran dehydrogenase compare
Atu5145 -1.0 -1.8 acetyltransferase compare
Atu3336 -1.0 -2.0 hypothetical protein compare
Atu4136 -1.0 -2.2 hypothetical protein compare
Atu0470 -1.0 -1.1 hypothetical protein compare
Atu3031 -1.0 -0.7 hypothetical protein compare
Atu4173 -1.0 -1.2 phosphoenolpyruvate-protein phosphotransferase compare
Atu0565 -1.0 -2.2 hypothetical protein compare
Atu3299 -1.0 -1.6 hypothetical protein compare
Atu0966 -0.9 -1.1 hypothetical protein compare
Atu1874 -0.9 -1.6 RecA protein compare
Atu0641 -0.9 -1.7 hypothetical protein compare
Atu3461 -0.9 -1.1 GntR family transcriptional regulator compare
Atu1219 -0.9 -0.6 hypothetical protein compare
Atu4040 -0.9 -1.5 hypothetical protein compare
Atu1409 -0.9 -2.0 ureidoglycolate hydrolase compare
Atu4290 -0.9 -1.8 hypothetical protein compare
Atu0516 -0.9 -1.7 chemotaxis receiver protein compare
Atu1213 -0.9 -1.0 hypothetical protein compare
Atu1629 -0.9 -0.6 transcriptional regulator, ArsR family compare
Atu0109 -0.9 -2.5 transcriptional regulator, MarR family compare
Atu5010 -0.9 -2.0 hypothetical protein compare
Atu3465 -0.9 -1.4 metallo-beta-lactamase superfamily protein compare
Atu3613 -0.9 -1.9 hypothetical protein compare
Atu3468 -0.9 -0.4 hypothetical protein compare
Atu6173 -0.9 -1.6 component of type IV secretion system compare
Atu1501 -0.8 -2.3 hypothetical protein compare
Atu2158 -0.8 -1.7 hypothetical protein compare
Atu4586 -0.8 -1.6 choloylglycine hydrolase family protein compare
Atu0792 -0.8 -1.7 hypothetical protein compare
Atu2130 -0.8 -1.2 hypothetical protein compare
Atu1748 -0.8 -2.5 NIFU-like protein compare
Atu0827 -0.8 -1.7 hypothetical protein compare
Atu4609 -0.8 -4.2 glycosyltransferase compare
Atu8155 -0.8 -1.1 hypothetical protein compare
Atu5116 -0.8 -2.9 transcriptional regulator protein compare
Atu3327 -0.8 -2.3 succinoglycan exopolysaccharide synthesis protein compare
Atu8184 -0.8 -2.1 hypothetical protein compare
Atu5034 -0.8 -1.9 hypothetical protein compare
Atu2057 -0.8 -1.3 DNA helicase II compare
Atu3750 -0.8 -1.4 thiamine-phosphate pyrophosphorylase compare
Atu1849 -0.8 -1.4 hypothetical protein compare
Atu2294 -0.8 -1.3 aminoglycoside N6'-acetyltransferase compare
Atu1546 -0.8 -2.1 transcriptional regulator, MerR family compare
Atu4459 -0.8 -1.5 6-O-methylguanine DNA methyltransferase compare
Atu0153 -0.8 -1.2 transcriptional regulator, Fur family compare
Atu2124 -0.8 -2.1 transcriptional regulator, ArsR family compare
Atu8189 -0.8 -1.9 hypothetical protein compare
Atu0340 -0.8 -0.9 SAM dependent methyltransferase compare
Atu0824 -0.8 -0.6 hypothetical protein compare
Atu0250 -0.8 -1.8 hypothetical protein compare
Atu1760 -0.7 -0.6 hypothetical protein compare
Atu3213 -0.7 -2.8 oligopeptide ABC transporter permease compare
Atu3850 -0.7 -2.6 hypothetical protein compare
Atu3926 -0.7 -1.6 translation initiation inhibitor compare
Atu1083 -0.7 -2.1 hypothetical protein compare
Atu1738 -0.7 -3.5 ABC transporter, nucleotide binding/ATPase protein compare
Atu0378 -0.7 -2.2 hydrolase compare
Atu3270 -0.7 -1.7 hypothetical protein compare
Atu1232 -0.7 -1.0 hypothetical protein compare
Atu2146 -0.7 -1.6 hypothetical protein compare
Atu3648 -0.7 -2.9 hypothetical protein compare
Atu2675 -0.7 -0.9 hypothetical protein compare
Atu3338 -0.7 -3.1 trehalose/maltose ABC transporter substrate-binding protein compare
Atu0707 -0.7 -1.2 transcriptional regulator, LuxR family compare
Atu3341 -0.7 -2.7 trehalose/maltose ABC transporter ATPase compare
Atu4231 -0.7 -2.0 formyltetrahydrofolate deformylase compare
Atu2407 -0.7 -1.0 urease gamma subunit compare
Atu5183 -0.7 -2.3 hypothetical protein compare
Atu4395 -0.7 -2.5 hypothetical protein compare
Atu6009 -0.7 -2.3 indole-3-lactate synthase compare
Atu0135 -0.7 -1.1 uracil phosphoribosyltransferase compare
Atu2441 -0.7 -0.8 RNA methylase compare
Atu4477 -0.7 -2.1 TetR family transcriptional regulator compare
Atu4265 -0.7 -2.5 hypothetical protein compare
Atu1469 -0.7 -1.3 hypothetical protein compare
Atu2462 -0.7 -0.8 hypothetical protein compare
Atu1513 -0.7 -1.8 ABC excinuclease subunit A compare
Atu1394 -0.7 -2.1 glutathione S-transferase compare
Atu1031 -0.7 -1.2 hypothetical protein compare
Atu2479 -0.7 -1.4 tRNA-Gly compare
Atu2736 -0.7 -3.1 dihydroxy-acid dehydratase compare
Atu3597 -0.7 -2.3 3-hydroxybutyryl-CoA dehydrogenase compare
Atu0762 -0.7 -0.9 hypothetical protein compare
Atu4161 -0.7 -0.6 hypothetical protein compare
Atu8147 -0.7 -2.4 hypothetical protein compare
Atu4139 -0.7 -0.7 hypothetical protein compare
Atu0485 -0.7 -1.2 hypothetical protein compare
Atu4608 -0.7 -3.6 hypothetical protein compare
Atu5152 -0.7 -1.8 hypothetical protein compare
Atu2174 -0.6 -2.1 hypothetical protein compare
Atu3275 -0.6 -1.8 invasion associated protein B compare
Atu0508 -0.6 -1.4 PH Adaption potassium efflux system compare
Atu4753 -0.6 -1.6 amino acid ABC transporter permease compare
Atu2122 -0.6 -2.3 lytic murein transglycosylase compare
Atu0486 -0.6 -1.4 dihydroorotate dehydrogenase compare
Atu5413 -0.6 -2.5 ABC transporter membrane spanning protein compare
Atu0788 -0.6 -1.6 hypothetical protein compare
Atu3047 -0.6 -2.3 oligopeptide ABC transporter permease compare
Atu2437 -0.6 -1.3 hypothetical protein compare
Atu0463 -0.6 -1.6 hypothetical protein compare
Atu0237 -0.6 -1.5 hypothetical protein compare
Atu0673 -0.6 -2.1 hypothetical protein compare
Atu1287 -0.6 -1.0 hypothetical protein compare
Atu8033 -0.6 -1.4 hypothetical protein compare
Atu2737 -0.6 -1.7 oxidoredutase compare
Atu3199 -0.6 -1.7 ribose ABC transporter permease compare
Atu2340 -0.6 -2.5 hypothetical protein compare
Atu5489 -0.6 -0.8 hypothetical protein compare
Atu1690 -0.6 -1.9 molybdopterin biosynthesis protein compare
Atu4345 -0.6 -1.2 hypothetical protein compare
Atu0030 -0.6 -0.5 phosphocarrier protein HPr compare
Atu0976 -0.6 -0.6 cycL protein compare
Atu2431 -0.6 -2.0 hypothetical protein compare
Atu4682 -0.6 -2.2 D-amino acid dehydrogenase small subunit compare
Atu1204 -0.6 -1.4 potassium uptake protein compare
Atu4050 -0.6 -1.1 UTP-glucose-1-phosphate uridylyltransferase compare
Atu4776 -0.6 -2.8 formate dehydrogenase alpha subunit compare


Specific Phenotypes

For 42 genes in this experiment