Experiment set16S226 for Agrobacterium fabrum C58

Compare to:

AgroPhage_C10

200 most important genes:

  gene name fitness t score description  
Atu5540 -4.8 -1.3 hypothetical protein compare
Atu6098 -4.7 -1.2 transcriptional regulator, HTH family compare
Atu0941 -3.8 -1.0 hypothetical protein compare
Atu1850 -3.8 -2.6 phosphoribosylformylglycinamidine synthetase II compare
Atu0141 -3.4 -1.6 cytochrome O ubiquinol oxidase subunit I compare
Atu1570 -3.4 -0.9 hypothetical protein compare
Atu3183 -3.4 -0.9 hypothetical protein compare
Atu0777 -3.3 -0.9 hypothetical protein compare
Atu1149 -3.1 -1.2 adenylate cyclase compare
Atu3413 -3.0 -2.6 AsnC family transcriptional regulator compare
Atu2484 -2.7 -1.0 hypothetical protein compare
Atu1679 -2.7 -2.2 peptidyl prolyl cis-trans isomerase compare
Atu0912 -2.7 -1.0 Na+/H+ antiporter compare
Atu0422 -2.6 -1.2 ABC transporter, membrane spanning protein compare
Atu0769 -2.4 -1.3 protoheme IX farnesyltransferase compare
Atu1508 -2.3 -3.8 hypothetical protein compare
Atu2368 -2.3 -0.8 hypothetical protein compare
Atu2063 -2.3 -1.1 hypothetical protein compare
Atu1683 -2.1 -1.9 hypothetical protein compare
Atu0086 -2.1 -0.8 ribosome-binding factor A compare
Atu3578 -2.1 -3.3 glycerol-3-phosphate dehydrogenase compare
Atu3663 -2.0 -1.3 hypothetical protein compare
Atu1030 -2.0 -0.9 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu5430 -1.9 -1.1 hypothetical protein compare
Atu0894 -1.9 -2.2 ABC transporter, membrane spanning protein compare
Atu1754 -1.8 -1.6 hypothetical protein compare
Atu2662 -1.8 -1.2 acetyltransferase compare
Atu0566 -1.8 -1.2 hypothetical protein compare
Atu2684 -1.7 -0.8 hypothetical protein compare
Atu2041 -1.7 -1.3 acetyltransferase compare
Atu3469 -1.7 -1.1 phosphoglyceromutase compare
Atu1369 -1.7 -1.6 HIT family protein compare
Atu2193 -1.6 -0.6 hypothetical protein compare
Atu0319 -1.6 -0.9 ubiquinone biosynthesis protein compare
Atu3335 -1.6 -3.7 3-methyladenine DNA glycosylase compare
Atu3095 -1.6 -1.9 hypothetical protein compare
Atu0237 -1.6 -2.1 hypothetical protein compare
Atu1725 -1.6 -2.4 hypothetical protein compare
Atu3728 -1.6 -3.3 hypothetical protein compare
Atu1858 -1.6 -2.4 hypothetical protein compare
Atu4148 -1.6 -3.6 UDP-glucuronic acid epimerase compare
Atu0842 -1.5 -1.0 hypothetical protein compare
Atu1891 -1.5 -2.0 cobalamin biosynthesis protein compare
Atu0677 -1.5 -1.2 hypothetical protein compare
Atu0043 -1.5 -0.9 imidazoleglycerol-phosphate dehydratase compare
Atu0206 -1.5 -1.7 hypothetical protein compare
Atu3144 -1.5 -3.3 GntR family transcriptional regulator compare
Atu1805 -1.5 -2.4 hypothetical protein compare
Atu1140 -1.5 -1.7 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu2120 -1.4 -2.0 O-methyltransferase compare
Atu0040 -1.4 -0.7 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu2349 -1.4 -1.1 hypothetical protein compare
Atu0340 -1.4 -1.3 SAM dependent methyltransferase compare
Atu4133 -1.4 -1.7 hypothetical protein compare
Atu1311 -1.3 -2.3 acetyltransferase compare
Atu0640 -1.3 -1.9 hypothetical protein compare
Atu2192 -1.3 -0.7 hypothetical protein compare
Atu4472 -1.3 -2.0 hypothetical protein compare
Atu8056 -1.3 -0.7 hypothetical protein compare
Atu2205 -1.3 -3.0 transcriptional regulator, MarR family compare
Atu0580 -1.3 -2.5 flagellar biosynthetic protein compare
Atu2827 -1.3 -2.4 hypothetical protein compare
Atu0533 -1.3 -1.2 putative inhibitor of septum formation compare
Atu1446 -1.3 -0.6 two component response regulator compare
Atu1688 -1.3 -3.1 indole-3-glycerol-phosphate synthase compare
Atu1835 -1.2 -2.1 hypothetical protein compare
Atu0895 -1.2 -1.3 ABC transporter, substrate binding protein compare
Atu1687 -1.2 -3.4 anthranilate phosphoribosyltransferase compare
Atu0886 -1.2 -0.8 hypothetical protein compare
Atu1252 -1.2 -1.3 hypothetical protein compare
Atu4342 -1.2 -1.5 hypothetical protein compare
Atu4763 -1.2 -1.2 AsnC family transcriptional regulator compare
Atu1884 -1.2 -2.3 ABC transporter, substrate binding protein (aliphatic sulfonate) compare
Atu1501 -1.2 -1.8 hypothetical protein compare
Atu0346 -1.2 -1.5 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu4707 -1.1 -2.8 NADH ubiquinone oxidoreductase chain F compare
Atu2462 -1.1 -1.0 hypothetical protein compare
Atu1952 -1.1 -0.6 hypothetical protein compare
Atu1223 -1.1 -0.8 hypothetical protein compare
Atu1440 -1.1 -2.6 hypothetical protein compare
Atu3667 -1.1 -1.3 aspartate alpha-decarboxylase compare
Atu3369 -1.1 -2.2 hypothetical protein compare
Atu1729 -1.1 -1.7 putative molybdenum cofactor biosynthesis protein compare
Atu0413 -1.1 -1.0 stress induced protein compare
Atu0017 -1.1 -1.1 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu8022 -1.1 -2.7 hypothetical protein compare
Atu2208 -1.1 -1.1 secretion chaperone compare
Atu2605 -1.1 -1.4 hypothetical protein compare
Atu0331 -1.1 -1.0 sigma-54 modulation protein compare
Atu3169 -1.1 -2.0 sorbitol/mannitol ABC transporter permease compare
Atu1639 -1.1 -2.4 hypothetical protein compare
Atu1415 -1.1 -2.5 3-hydroxyacyl-CoA dehydrogenase type II compare
Atu2464 -1.1 -1.6 formyltetrahydrofolate deformylase compare
Atu1439 -1.1 -0.9 hypothetical protein compare
Atu1455 -1.1 -1.9 hypothetical protein compare
Atu1226 -1.0 -2.1 exoD protein compare
Atu4416 -1.0 -2.2 phosphopantetheinyl transferase compare
Atu1629 -1.0 -0.6 transcriptional regulator, ArsR family compare
Atu5451 -1.0 -1.0 hypothetical protein compare
Atu2116 -1.0 -1.5 hypothetical protein compare
Atu2324 -1.0 -1.0 ureidoglycolate hydrolase compare
Atu0562 -1.0 -1.1 flagellar motor switch protein FliN compare
Atu0938 -1.0 -1.0 transcriptional regulator, MerR family compare
Atu4772 -1.0 -2.7 hypothetical protein compare
Atu8018 -1.0 -0.5 hypothetical protein compare
Atu3400 -1.0 -1.5 hypothetical protein compare
Atu3151 -1.0 -2.9 sugar ABC transporter substrate-binding protein compare
Atu2067 -1.0 -0.5 hypothetical protein compare
Atu1103 -1.0 -1.3 rRNA-adenine N6,N6-dimethyltransferase compare
Atu2115 -1.0 -2.7 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
Atu2166 -1.0 -2.4 hypothetical protein compare
Atu3467 -1.0 -0.8 hypothetical protein compare
Atu3121 -1.0 -0.6 cold shock protein compare
Atu4567 -1.0 -2.3 ROK family transcriptional regulator compare
Atu0659 -1.0 -1.9 NTP pyrophosphohydrolase, MutT family compare
Atu4144 -1.0 -0.5 hypothetical protein compare
Atu1337 -1.0 -2.7 hypothetical protein compare
Atu1781 -0.9 -1.1 hypothetical protein compare
Atu0908 -0.9 -2.1 transcriptional regulator compare
Atu0809 -0.9 -0.7 hypothetical protein compare
Atu5045 -0.9 -0.9 hypothetical protein compare
Atu4161 -0.9 -0.6 hypothetical protein compare
Atu3291 -0.9 -1.9 Lpr family transcriptional regulator compare
Atu5486 -0.9 -2.6 hypothetical protein compare
Atu2590 -0.9 -3.3 hypothetical protein compare
Atu4697 -0.9 -3.2 oligopeptide ABC transporter permease compare
Atu3985 -0.9 -3.1 pyrroline-5-carboxylate reductase compare
Atu4452 -0.9 -1.5 hypothetical protein compare
Atu2591 -0.9 -2.9 glucosyltransferase compare
Atu0577 -0.9 -1.5 FLAF protein compare
Atu1965 -0.9 -1.9 UDP-glucose 4-epimerase compare
Atu3127 -0.9 -2.3 acetyltransferase compare
Atu2499 -0.9 -3.3 Isochorismatase compare
Atu2372 -0.9 -2.0 UDP-hexose transferase compare
Atu4432 -0.9 -2.9 oligopeptide ABC transporter permease compare
Atu4226 -0.9 -3.1 transcriptional regulator compare
Atu8203 -0.9 -2.1 hypothetical protein compare
Atu0553 -0.9 -2.2 flagellar hook-basal body complex protein compare
Atu2634 -0.9 -0.5 hypothetical protein compare
Atu1846 -0.9 -0.6 hypothetical protein compare
Atu0779 -0.9 -2.1 peroxiredoxin compare
Atu3286 -0.9 -1.9 ABC transporter permease compare
Atu3261 -0.9 -2.5 ABC transporter permease compare
Atu8032 -0.9 -0.8 hypothetical protein compare
Atu0755 -0.8 -0.8 hypothetical protein compare
Atu1308 -0.8 -1.6 aspartate carbamoyl transferase catalytic subunit compare
Atu2249 -0.8 -0.4 hypothetical protein compare
Atu8040 -0.8 -1.7 hypothetical protein compare
Atu4200 -0.8 -1.6 hypothetical protein compare
Atu4691 -0.8 -2.5 2-hydroxyacid dehydrogenase compare
Atu8190 -0.8 -2.0 hypothetical protein compare
Atu2352 -0.8 -0.5 hypothetical protein compare
Atu2592 -0.8 -2.5 hypothetical protein compare
Atu4458 -0.8 -0.7 hypothetical protein compare
Atu1577 -0.8 -2.2 ABC transporter, substrate binding protein (amino acid) compare
Atu3198 -0.8 -1.5 ribose ABC transporter substrate-binding protein compare
Atu8112 -0.8 -2.6 hypothetical protein compare
Atu3597 -0.8 -2.7 3-hydroxybutyryl-CoA dehydrogenase compare
Atu3159 -0.8 -2.0 3-hydroxyisobutyrate dehydrogenase compare
Atu0536 -0.8 -2.0 hypothetical protein compare
Atu2051 -0.8 -1.4 hypothetical protein compare
Atu4435 -0.8 -1.5 oligopeptide ABC transporter ATPase compare
Atu1116 -0.8 -2.2 two component response regulator compare
Atu1677 -0.8 -1.4 queuine tRNA-ribosyltransferase compare
Atu2275 -0.8 -1.5 hypothetical protein compare
Atu1444 -0.8 -1.6 nitrogen regulation protein compare
Atu2585 -0.8 -1.7 hypothetical protein compare
Atu8165 -0.8 -1.7 hypothetical protein compare
Atu1849 -0.8 -1.2 hypothetical protein compare
Atu2198 -0.8 -2.8 hypothetical protein compare
Atu4345 -0.8 -1.3 hypothetical protein compare
Atu0368 -0.8 -1.7 tRNA pseudouridine synthase I compare
Atu4686 -0.8 -0.9 hypothetical protein compare
Atu8117 -0.8 -1.8 hypothetical protein compare
Atu4151 -0.8 -1.3 LysR family transcriptional regulator compare
Atu1043 -0.8 -2.0 hypothetical protein compare
Atu1921 -0.8 -1.6 hypothetical protein compare
Atu3085 -0.8 -2.6 hydantoin racemase compare
Atu4518 -0.8 -1.5 branched chain amino acid ABC transporter permease compare
Atu4067 -0.8 -1.4 hypothetical protein compare
Atu4277 -0.8 -2.2 LamB/YcsF family protein compare
Atu1018 -0.8 -1.9 hypothetical protein compare
Atu1026 -0.8 -1.0 hypothetical protein compare
Atu3267 -0.8 -1.2 dipeptide ABC transporter permease compare
Atu4242 -0.8 -2.2 hypothetical protein compare
Atu0393 -0.8 -1.4 ABC transporter, membrane spanning protein compare
Atu4541 -0.8 -1.6 carboxymuconolactone decarboxylase compare
Atu5112 -0.7 -2.4 hypothetical protein compare
Atu3807 -0.7 -1.3 AsnC family transcriptional regulator compare
Atu5493 -0.7 -2.4 hypothetical protein compare
Atu0961 -0.7 -1.9 hypothetical protein compare
Atu2582 -0.7 -2.1 UDP-glucose/GDP-mannose dehydrogenase compare
Atu3340 -0.7 -2.4 trehalose/maltose ABC transporter permease compare
Atu3186 -0.7 -2.6 glycerol-3-phosphate ABC transporter permease compare
Atu4546 -0.7 -2.3 IclR family transcriptional regulator compare
Atu3433 -0.7 -3.3 oligopeptide ABC transporter substrate-binding protein compare
Atu4371 -0.7 -2.1 sugar ABC transporter permease compare
Atu3009 -0.7 -0.5 exopolysaccharide production protein compare
Atu2083 -0.7 -0.8 DNA repair protein RecN compare
Atu2648 -0.7 -1.6 hypothetical protein compare


Specific Phenotypes

For 13 genes in this experiment