Experiment set16S226 for Agrobacterium fabrum C58

Compare to:

AgroPhage_C10

200 most detrimental genes:

  gene name fitness t score description  
Atu4606 +9.0 72.3 hypothetical protein compare
Atu3311 +8.2 65.6 phosphomannose isomerase compare
Atu3353 +8.1 41.9 mannose-1-phosphate guanylyltransferase compare
Atu4166 +8.1 13.2 UDP-glucose 4-epimerase compare
Atu4615 +8.1 40.2 glucose-1-phosphate thymidylyltransferase compare
Atu2379 +8.0 57.9 phosphomannomutase compare
Atu4613 +7.9 61.2 glycosyltransferase compare
Atu4617 +7.9 58.8 dTDP-D-glucose-4,6-dehydratase compare
Atu2183 +7.8 58.8 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu4614 +7.8 51.1 glycosyltransferase compare
Atu4616 +7.7 19.0 dTDP-4-dehydrorhamnose reductase compare
Atu4609 +7.7 62.9 glycosyltransferase compare
Atu4608 +7.7 35.2 hypothetical protein compare
Atu4610 +7.5 56.0 sugar nucleotide epimerase/dehydratase compare
Atu4618 +7.4 51.2 dTDP-rhamnose-3,5-epimerase compare
Atu1028 +4.2 11.3 hypothetical protein compare
Atu1527 +3.8 9.7 nitrogen fixation protein FixS compare
Atu1529 +3.5 8.0 nitrogen fixation protein FixH compare
Atu1536 +3.2 8.3 cytochrome C oxidase, FixO chain compare
Atu1528 +3.2 17.7 nitrogen fixation protein FixI compare
Atu1173 +3.2 15.5 MFS permease compare
Atu1535 +3.1 3.7 cytochrome c oxidase, FixQ chain compare
Atu3008 +3.0 4.0 hypothetical protein compare
Atu1602 +3.0 13.7 transcriptional activator, Crp family compare
Atu1530 +3.0 10.0 nitrogen fixation protein FixG compare
Atu1534 +2.8 9.1 cytochrome-c oxidase, FixP chain compare
Atu2239 +2.7 4.7 ubiquinol-cytochrome C reductase iron-sulfur subunit compare
Atu2238 +2.7 7.6 ubiquinol-cytochrome c reductase cytochrome b subunit compare
Atu1537 +2.7 13.1 cytochrome-c oxidase, FixN chain compare
Atu2237 +2.4 5.7 cytochrome c1 compare
Atu4897 +2.4 5.3 hypothetical protein compare
Atu4317 +2.3 2.2 TetR family transcriptional regulator compare
Atu1468 +2.1 8.5 hypothetical protein compare
Atu1601 +2.1 8.8 oxygen-independent coproporphyrinogen III oxidase compare
Atu2472 +2.1 0.9 hypothetical protein compare
Atu0976 +2.1 3.0 cycL protein compare
Atu3001 +2.1 5.4 hypothetical protein compare
Atu1701 +2.0 2.4 protein-L-isoaspartate O-methyltransferase compare
Atu8138 +1.9 1.4 hypothetical protein compare
Atu2439 +1.9 2.0 hypothetical protein compare
Atu2394 +1.9 3.3 Regulator of Biofilm formation, Fnr Family compare
Atu3011 +1.8 3.8 ArsR family transcriptional regulator compare
Atu3018 +1.8 5.3 hypothetical protein compare
Atu0953 +1.8 2.4 hypothetical protein compare
Atu3031 +1.8 2.4 hypothetical protein compare
Atu4217 +1.8 1.0 TetR family transcriptional regulator compare
Atu4896 +1.7 3.0 acetyltransferase compare
Atu4607 +1.7 5.2 sugar acetylase compare
Atu3010 +1.7 7.5 hypothetical protein compare
Atu2073 +1.7 2.8 membrane protein compare
Atu1074 +1.7 6.8 NAD/NADP dependent oxidoreductase compare
Atu0973 +1.7 4.8 cycH protein compare
Atu1521 +1.7 2.2 ABC transporter, substrate binding protein (zinc) compare
Atu3019 +1.6 6.4 hypothetical protein compare
Atu3012 +1.6 2.7 hypothetical protein compare
Atu1225 +1.6 1.6 hypothetical protein compare
Atu4894 +1.6 7.2 transposase compare
Atu8202 +1.6 4.0 hypothetical protein compare
Atu4893 +1.6 5.0 hypothetical protein compare
Atu4374 +1.5 2.6 hypothetical protein compare
Atu2790 +1.5 1.7 3-isopropylmalate dehydratase, small subunit compare
Atu4884 +1.5 2.6 hypothetical protein compare
Atu3032 +1.5 3.4 hypothetical protein compare
Atu3014 +1.5 2.4 hypothetical protein compare
Atu4892 +1.5 8.7 hypothetical protein compare
Atu3006 +1.5 4.5 hypothetical protein compare
Atu1739 +1.4 3.4 permease compare
Atu8126 +1.4 4.7 putative phage tail protein I compare
Atu0528 +1.4 2.2 large conductance mechanosensitive channel protein compare
Atu1307 +1.4 2.3 dihydroorotase compare
Atu2799 +1.4 4.2 precorrin-6x reductase compare
Atu0435 +1.4 2.6 tRNA-Gly compare
Atu1466 +1.4 1.7 hypothetical protein compare
Atu4072 +1.4 1.0 nodulation protein N compare
Atu8087 +1.4 0.9 putative peptidoglycan binding protein compare
Atu4874 +1.4 5.6 hypothetical protein compare
Atu0860 +1.3 7.1 hypothetical protein compare
Atu1803 +1.3 2.6 cold shock protein compare
Atu4792 +1.3 3.1 hypothetical protein compare
Atu2442 +1.3 1.1 hypothetical protein compare
Atu3015 +1.3 4.6 hypothetical protein compare
Atu1581 +1.3 2.2 hypothetical protein compare
Atu3798 +1.3 3.6 TetR family transcriptional regulator compare
Atu3613 +1.3 4.3 hypothetical protein compare
Atu8093 +1.3 4.5 hypothetical protein compare
Atu2068 +1.3 2.1 hypothetical protein compare
Atu3022 +1.3 5.1 sugar ABC transporter permease compare
Atu1619 +1.3 1.8 protein-export membrane protein SECG compare
Atu4888 +1.2 4.8 hypothetical protein compare
Atu0836 +1.2 2.0 Glutathione-S-transferase compare
Atu2787 +1.2 1.3 hypothetical protein compare
Atu2113 +1.2 1.6 N-acetylmuramoyl-L-alanine amidase compare
Atu0606 +1.2 1.9 hypothetical protein compare
Atu3025 +1.2 6.7 oligo alginate lyase compare
Atu8181 +1.2 2.4 hypothetical protein compare
Atu2783 +1.2 2.7 acetyltransferase compare
Atu3034 +1.1 4.0 ROK family transcriptional regulator compare
Atu3030 +1.1 2.6 hypothetical protein compare
Atu4887 +1.1 2.2 hypothetical protein compare
Atu0450 +1.1 6.6 transcription antitermination protein compare
Atu0463 +1.1 4.7 hypothetical protein compare
Atu1667 +1.1 1.7 hypothetical protein compare
Atu8144 +1.1 1.9 hypothetical protein compare
Atu4876 +1.1 6.4 oxidoreductase compare
Atu1904 +1.1 1.1 transcriptional regulator compare
Atu4165 +1.1 2.2 hypothetical protein compare
Atu0236 +1.1 2.3 hypothetical protein compare
Atu3026 +1.1 3.3 short chain dehydrogenase compare
Atu1774 +1.1 2.9 ABC transporter, substrate binding protein (peptide) compare
Atu3013 +1.1 2.5 hypothetical protein compare
Atu3021 +1.1 3.7 sugar ABC transporter ATPase compare
Atu4881 +1.1 5.0 hypothetical protein compare
Atu3486 +1.1 1.7 DeoR family transcriptional regulator compare
Atu4753 +1.1 3.3 amino acid ABC transporter permease compare
Atu4880 +1.1 4.4 AraC family transcriptional regulator compare
Atu0063 +1.0 2.8 ABC transporter, substrate binding protein (sugar) compare
Atu0723 +1.0 1.0 FAD dependent oxidoreductase compare
Atu2620 +1.0 1.4 hypothetical protein compare
Atu4875 +1.0 2.9 hypothetical protein compare
Atu0977 +1.0 2.5 serine protease DO-like protease compare
Atu3619 +1.0 1.6 hypothetical protein compare
Atu3047 +1.0 2.8 oligopeptide ABC transporter permease compare
Atu2040 +1.0 2.8 phosphoserine phosphatase compare
Atu1004 +1.0 2.7 hypothetical protein compare
Atu0845 +1.0 1.3 hypothetical protein compare
Atu2554 +1.0 1.4 lysyl-tRNA synthetase compare
Atu0956 +1.0 3.3 phage prohead protease compare
Atu0462 +1.0 5.4 endolysin compare
Atu3727 +1.0 1.8 hypothetical protein compare
Atu2715 +1.0 1.6 hypothetical protein compare
Atu8029 +1.0 1.3 hypothetical protein compare
Atu2692 +1.0 2.7 intracellular septation protein compare
Atu3191 +1.0 2.2 outer membrane protein compare
Atu0101 +1.0 2.5 cytochrome c compare
Atu3707 +1.0 1.7 phosphoserine aminotransferase compare
Atu0924 +1.0 0.7 hypothetical protein compare
Atu2795 +1.0 4.1 cobalamin biosynthetic protein compare
Atu8185 +1.0 2.2 hypothetical protein compare
Atu4866 +1.0 4.1 hypothetical protein compare
Atu4872 +1.0 2.9 LysR family transcriptional regulator compare
Atu4061 +1.0 2.1 exopolysaccharide production repressor protein compare
Atu0592 +0.9 2.4 ABC transporter, membrane spanning protein compare
Atu4873 +0.9 2.9 TetR family transcriptional regulator compare
Atu0525 +0.9 3.1 transcriptional regulator, LuxR family compare
Atu3647 +0.9 1.4 hypothetical protein compare
Atu3476 +0.9 1.6 AsnC family transcriptional regulator compare
Atu2788 +0.9 3.3 citrate lyase, beta subunit compare
Atu3730 +0.9 0.7 hypothetical protein compare
Atu2794 +0.9 2.4 uroporphyrin-III C-methyltransferase compare
Atu3020 +0.9 3.1 GntR family transcriptional regulator compare
Atu3048 +0.9 3.7 oligopeptide ABC transporter permease compare
Atu1062 +0.9 1.2 phosphatidylserine synthase compare
Atu0026 +0.9 0.9 hypothetical protein compare
Atu3634 +0.9 2.6 penicillin-binding protein dacf precursor compare
Atu4496 +0.9 2.6 acetyltransferase compare
Atu2357 +0.9 2.1 hypothetical protein compare
Atu2302 +0.9 1.4 hypothetical protein compare
Atu0280 +0.9 0.6 hypothetical protein compare
Atu4053 +0.9 1.1 succinoglycan biosynthesis protein compare
Atu4878 +0.9 2.0 hypothetical protein compare
Atu2274 +0.9 2.5 cation efflux system protein compare
Atu2802 +0.9 3.1 precorrin-8X methylmutase compare
Atu8036 +0.9 2.1 protein YBGT-like protein compare
Atu3604 +0.9 0.6 hypoxanthine phosphoribosyltransferase compare
Atu5088 +0.9 1.8 hypothetical protein compare
Atu4677 +0.9 0.8 hypothetical protein compare
Atu3024 +0.9 5.1 sugar ABC transporter permease compare
Atu1737 +0.9 0.8 hypothetical protein compare
Atu2432 +0.9 1.0 hypothetical protein compare
Atu5142 +0.9 1.2 hypothetical protein compare
Atu1344 +0.9 0.6 hypothetical protein compare
Atu4877 +0.9 4.7 short-chain dehydrogenase compare
Atu8187 +0.9 2.7 hypothetical protein compare
Atu3712 +0.9 0.9 hypothetical protein compare
Atu4143 +0.9 2.6 hypothetical protein compare
Atu2200 +0.9 1.5 cold shock protein compare
Atu0461 +0.9 5.2 hypothetical protein compare
Atu8128 +0.9 2.4 putative bacteriophage P2 tail protein compare
Atu3287 +0.9 2.3 thiamine biosynthesis associated protein compare
Atu4865 +0.9 4.0 oxidoreductase compare
Atu0419 +0.9 0.9 two component sensor kinase compare
Atu0749 +0.9 2.0 biotin synthesis BioY protein compare
Atu4665 +0.9 2.1 alpha-galactosidase compare
Atu2042 +0.9 1.7 short chain dehydrogenase compare
Atu0876 +0.8 0.8 superoxide dismutase compare
Atu1734 +0.8 1.5 hypothetical protein compare
Atu3029 +0.8 3.1 glucarate dehydratase compare
Atu1775 +0.8 3.3 polyketide biosynthesis associated protein compare
Atu2797 +0.8 1.6 cobalamin biosynthesis protein compare
Atu4641 +0.8 1.3 LysR family transcriptional regulator compare
Atu2367 +0.8 1.0 hypothetical protein compare
Atu8156 +0.8 2.4 hypothetical protein compare
Atu4486 +0.8 2.3 nitroreductase compare
Atu3957 +0.8 1.5 glycine-betaine ABC transporter substrate-binding protein compare
Atu8096 +0.8 1.1 hypothetical protein compare
Atu4882 +0.8 1.7 hypothetical protein compare
Atu1380 +0.8 2.4 zinc metallopeptidase compare
Atu0477 +0.8 0.7 hypothetical protein compare
Atu1364 +0.8 2.6 ATP-dependent Clp protease, ATP-binding subunit compare
Atu0453 +0.8 3.9 hypothetical protein compare


Specific Phenotypes

For 13 genes in this experiment