Experiment set16S210 for Agrobacterium fabrum C58

Compare to:

No phage control

200 most important genes:

  gene name fitness t score description  
Atu2067 -4.7 -1.3 hypothetical protein compare
Atu6098 -4.0 -1.1 transcriptional regulator, HTH family compare
Atu0953 -3.5 -1.4 hypothetical protein compare
Atu1446 -3.4 -1.8 two component response regulator compare
Atu0031 -2.9 -1.1 PTS system, IIA component compare
Atu3468 -2.6 -1.0 hypothetical protein compare
Atu0041 -2.0 -2.2 glutamine amidotransferase compare
Atu2073 -2.0 -2.7 membrane protein compare
Atu4317 -1.9 -1.3 TetR family transcriptional regulator compare
Atu4053 -1.9 -1.6 succinoglycan biosynthesis protein compare
Atu4166 -1.8 -2.1 UDP-glucose 4-epimerase compare
Atu0941 -1.8 -1.0 hypothetical protein compare
Atu0422 -1.8 -1.6 ABC transporter, membrane spanning protein compare
Atu0824 -1.6 -1.2 hypothetical protein compare
Atu3121 -1.6 -1.4 cold shock protein compare
Atu1739 -1.5 -2.2 permease compare
Atu1714 -1.5 -1.1 exonuclease III compare
Atu0141 -1.5 -1.0 cytochrome O ubiquinol oxidase subunit I compare
Atu1163 -1.5 -0.8 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu2634 -1.5 -1.5 hypothetical protein compare
Atu0399 -1.5 -3.2 dihydroorotase compare
Atu2235 -1.4 -1.8 hypothetical protein compare
Atu0784 -1.4 -2.1 hypothetical protein compare
Atu2201 -1.3 -2.8 hydrolase compare
Atu4006 -1.3 -2.8 AsnC family transcriptional regulator compare
Atu4072 -1.3 -1.2 nodulation protein N compare
Atu6165 -1.3 -1.1 hypothetical protein compare
Atu1687 -1.3 -5.1 anthranilate phosphoribosyltransferase compare
Atu2442 -1.3 -1.8 hypothetical protein compare
Atu5164 -1.3 -0.9 type IV secretion protein AvhB3 compare
Atu0421 -1.2 -0.8 ABC transporter, membrane spanning protein compare
Atu2352 -1.2 -1.5 hypothetical protein compare
Atu3730 -1.2 -0.8 hypothetical protein compare
Atu0017 -1.2 -2.3 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu3496 -1.2 -1.5 hypothetical protein compare
Atu2633 -1.2 -1.5 RhtB family transporter compare
Atu2662 -1.2 -1.0 acetyltransferase compare
Atu5045 -1.1 -1.6 hypothetical protein compare
Atu2057 -1.1 -1.8 DNA helicase II compare
Atu0130 -1.1 -2.3 cytidine deaminase compare
Atu0142 -1.1 -1.5 cytochrome o ubiquinol oxidase subunit II compare
Atu0751 -1.1 -4.1 ABC transporter, nucleotide binding/ATPase protein (cobalt) compare
Atu0036 -1.1 -1.3 hypothetical protein compare
Atu0486 -1.0 -1.8 dihydroorotate dehydrogenase compare
Atu2083 -1.0 -1.7 DNA repair protein RecN compare
Atu1688 -1.0 -2.0 indole-3-glycerol-phosphate synthase compare
Atu0846 -1.0 -1.9 transcriptional regulator, MarR family compare
Atu4618 -1.0 -4.9 dTDP-rhamnose-3,5-epimerase compare
Atu0029 -1.0 -2.2 S-adenosylhomocysteine hydrolase compare
Atu1588 -1.0 -3.5 homoserine dehydrogenase compare
Atu1475 -1.0 -0.8 hypothetical protein compare
Atu0051 -1.0 -2.0 two component sensor kinase compare
Atu2472 -1.0 -1.1 hypothetical protein compare
Atu3750 -1.0 -2.0 thiamine-phosphate pyrophosphorylase compare
Atu3160 -1.0 -1.7 hypothetical protein compare
Atu0070 -1.0 -3.8 ribonucleoside-diphosphate reductase 2 alpha chain compare
Atu0876 -0.9 -1.2 superoxide dismutase compare
Atu0298 -0.9 -2.4 orotidine 5 compare
Atu1874 -0.9 -1.7 RecA protein compare
Atu4610 -0.9 -5.1 sugar nucleotide epimerase/dehydratase compare
Atu2125 -0.9 -0.7 ABC transporter, nucleotide binding/ATPase protein compare
Atu4469 -0.9 -1.6 iron ABC transporter permease compare
Atu0435 -0.9 -1.3 tRNA-Gly compare
Atu4614 -0.9 -3.6 glycosyltransferase compare
Atu8191 -0.9 -1.1 hypothetical protein compare
Atu1339 -0.9 -1.1 ribonuclease E compare
Atu0331 -0.9 -0.9 sigma-54 modulation protein compare
Atu0434 -0.9 -1.1 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu4617 -0.9 -4.7 dTDP-D-glucose-4,6-dehydratase compare
Atu1513 -0.9 -2.5 ABC excinuclease subunit A compare
Atu1952 -0.9 -1.0 hypothetical protein compare
Atu2011 -0.9 -2.3 hypothetical protein compare
Atu1518 -0.9 -1.6 transcriptional regulator, Fur family compare
Atu5167 -0.8 -2.1 type IV secretion protein AvhB6 compare
Atu0886 -0.8 -0.7 hypothetical protein compare
Atu5163 -0.8 -2.3 type IV secretion protein AvhB2 compare
Atu0025 -0.8 -1.2 hypothetical protein compare
Atu3510 -0.8 -1.0 amidohydrolase compare
Atu1323 -0.8 -1.7 hypothetical protein compare
Atu3394 -0.8 -1.0 iron ABC transporter ATPase compare
Atu1495 -0.8 -1.0 hypothetical protein compare
Atu8112 -0.8 -3.1 hypothetical protein compare
Atu0572 -0.8 -1.9 hypothetical protein compare
Atu2074 -0.8 -1.9 hypothetical protein compare
Atu3299 -0.8 -1.7 hypothetical protein compare
Atu4582 -0.8 -1.8 ferredoxin compare
Atu2406 -0.8 -1.1 hypothetical protein compare
Atu5114 -0.8 -1.8 hypothetical protein compare
Atu5473 -0.8 -3.4 D-alanine aminotransferase compare
Atu3507 -0.8 -2.3 hypothetical protein compare
Atu5061 -0.8 -2.8 glycerophosphoryl diester phosphodiesterase compare
Atu1066 -0.8 -2.0 hypothetical protein compare
Atu8168 -0.7 -1.3 hypothetical protein compare
Atu1110 -0.7 -1.1 cytosol aminopeptidase compare
Atu0825 -0.7 -2.8 quinone oxidoreductase compare
Atu8087 -0.7 -0.5 putative peptidoglycan binding protein compare
Atu3598 -0.7 -0.5 thiol:disulfide interchange protein compare
Atu4613 -0.7 -4.4 glycosyltransferase compare
Atu1227 -0.7 -3.4 hypothetical protein compare
Atu3492 -0.7 -1.3 sugar kinase compare
Atu4093 -0.7 -1.8 hypothetical protein compare
Atu1686 -0.7 -4.5 peptidyl-prolyl cis-trans isomerse D compare
Atu0361 -0.7 -1.2 transcriptional regulator compare
Atu4705 -0.7 -2.3 LysR family transcriptional regulator compare
Atu3610 -0.7 -2.2 transporter compare
Atu4139 -0.7 -1.0 hypothetical protein compare
Atu4133 -0.7 -1.0 hypothetical protein compare
Atu4223 -0.7 -0.9 sarcosine oxidase delta subunit compare
Atu4589 -0.7 -1.5 transmembrane transport protein compare
Atu2141 -0.7 -1.6 hypothetical protein compare
Atu5158 -0.7 -2.3 hypothetical protein compare
Atu1185 -0.7 -1.7 hypothetical protein compare
Atu4615 -0.7 -2.9 glucose-1-phosphate thymidylyltransferase compare
Atu3295 -0.7 -2.2 hypothetical protein compare
Atu8155 -0.7 -2.6 hypothetical protein compare
Atu2484 -0.7 -0.7 hypothetical protein compare
Atu0206 -0.7 -1.1 hypothetical protein compare
Atu1028 -0.7 -1.2 hypothetical protein compare
Atu1435 -0.7 -1.5 hypothetical protein compare
Atu2115 -0.7 -2.6 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
Atu4120 -0.7 -2.8 mandelate racemase compare
Atu3698 -0.7 -1.8 thioredoxin compare
Atu0297 -0.6 -1.6 hypothetical protein compare
Atu3488 -0.6 -1.9 ABC transporter permease compare
Atu4616 -0.6 -0.8 dTDP-4-dehydrorhamnose reductase compare
Atu2113 -0.6 -1.2 N-acetylmuramoyl-L-alanine amidase compare
Atu2348 -0.6 -2.9 sugar binding protein compare
Atu4787 -0.6 -2.4 inositol monophosphatase compare
Atu4349 -0.6 -2.1 hypothetical protein compare
Atu0115 -0.6 -0.5 hypothetical protein compare
Atu2649 -0.6 -1.6 hypothetical protein compare
Atu1916 -0.6 -1.7 hypothetical protein compare
Atu3265 -0.6 -1.1 hypothetical protein compare
Atu3465 -0.6 -1.4 metallo-beta-lactamase superfamily protein compare
Atu3267 -0.6 -1.9 dipeptide ABC transporter permease compare
Atu4609 -0.6 -2.9 glycosyltransferase compare
Atu1223 -0.6 -0.6 hypothetical protein compare
Atu5106 -0.6 -0.9 DNA binding protein compare
Atu8096 -0.6 -0.8 hypothetical protein compare
Atu0071 -0.6 -2.6 ribonucleoside-diphosphate reductase 2 beta chain compare
Atu1856 -0.6 -2.0 inositol monophosphatase family protein compare
Atu2204 -0.6 -0.8 hypothetical protein compare
Atu0135 -0.6 -1.6 uracil phosphoribosyltransferase compare
Atu0085 -0.6 -1.5 tRNA pseudouridine 55 synthase compare
Atu2146 -0.6 -1.3 hypothetical protein compare
Atu4608 -0.6 -4.0 hypothetical protein compare
Atu2028 -0.6 -0.7 transcriptional regulator, ArsR family compare
Atu8162 -0.6 -0.5 hypothetical protein compare
Atu2289 -0.6 -3.7 anthranilate synthase component I and II compare
Atu2655 -0.6 -2.2 hypothetical protein compare
Atu2379 -0.6 -3.3 phosphomannomutase compare
Atu8117 -0.6 -1.6 hypothetical protein compare
Atu3813 -0.6 -1.9 3-oxoacyl-ACP reductase compare
Atu5169 -0.6 -1.2 type IV secretion protein AvhB8 compare
Atu3847 -0.6 -1.8 hypothetical protein compare
Atu2298 -0.6 -1.6 hypothetical protein compare
Atu0101 -0.6 -1.4 cytochrome c compare
Atu4468 -0.6 -1.8 iron transport ABC transporter permease compare
Atu2456 -0.6 -1.3 lactoylglutathione lyase compare
Atu0770 -0.6 -2.8 cytochrome C oxidase assembly protein compare
Atu1729 -0.6 -1.8 putative molybdenum cofactor biosynthesis protein compare
Atu0927 -0.5 -2.6 LysE family transporter compare
Atu8052 -0.5 -0.7 hypothetical protein compare
Atu1902 -0.5 -1.7 transketolase compare
Atu3324 -0.5 -1.4 hypothetical protein compare
Atu4472 -0.5 -1.0 hypothetical protein compare
Atu4161 -0.5 -0.6 hypothetical protein compare
Atu3493 -0.5 -1.5 non-heme haloperoxidase compare
Atu0981 -0.5 -2.8 glutamate-ammonia-ligase adenylyltransferase compare
Atu2757 -0.5 -1.7 nitrogen regulatory protein PII compare
Atu2306 -0.5 -2.5 methionine aminopeptidase compare
Atu4518 -0.5 -2.3 branched chain amino acid ABC transporter permease compare
Atu2317 -0.5 -1.1 hypothetical protein compare
Atu3287 -0.5 -1.6 thiamine biosynthesis associated protein compare
Atu2626 -0.5 -1.4 hypothetical protein compare
Atu4486 -0.5 -1.7 nitroreductase compare
Atu3215 -0.5 -1.9 oligopeptide ABC transporter ATPase compare
Atu0920 -0.5 -1.4 hypothetical protein compare
Atu3511 -0.5 -1.3 glutaredoxin compare
Atu0836 -0.5 -1.0 Glutathione-S-transferase compare
Atu1503 -0.5 -0.5 hypothetical protein compare
Atu2660 -0.5 -1.2 hypothetical protein compare
Atu5028 -0.5 -1.2 IS426 transposase compare
Atu0474 -0.5 -1.8 putative RNA polymerase sigma-70 factor compare
Atu5161 -0.5 -2.1 hypothetical protein compare
Atu2798 -0.5 -1.3 precorrin-6y methyltransferase compare
Atu0277 -0.5 -2.0 hypothetical protein compare
Atu1567 -0.5 -2.3 glutathione-independent formaldehyde dehydrogenase compare
Atu5166 -0.5 -2.0 type IV secretion protein AvhB5 compare
Atu1354 -0.5 -0.5 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase compare
Atu1230 -0.5 -1.6 hypothetical protein compare
Atu2131 -0.5 -1.4 hypothetical protein compare
Atu0654 -0.5 -1.7 transcriptional regulator, LysR family compare
Atu2183 -0.5 -2.2 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu2166 -0.5 -1.3 hypothetical protein compare
Atu4307 -0.5 -1.7 hypothetical protein compare
Atu3201 -0.5 -2.0 TetR family transcriptional regulator compare
Atu2025 -0.5 -1.4 transcriptional regulator compare
Atu3338 -0.5 -2.6 trehalose/maltose ABC transporter substrate-binding protein compare
Atu1449 -0.5 -1.4 potassium uptake protein compare


Specific Phenotypes

None in this experiment

For Agrobacterium fabrum C58 in nophagecontrol experiments