Experiment set16S210 for Agrobacterium fabrum C58

Compare to:

No phage control

200 most detrimental genes:

  gene name fitness t score description  
Atu4897 +2.2 4.6 hypothetical protein compare
Atu3008 +2.1 3.3 hypothetical protein compare
Atu1527 +1.6 2.7 nitrogen fixation protein FixS compare
Atu4893 +1.5 5.6 hypothetical protein compare
Atu3017 +1.4 2.4 phosphoglyceromutase compare
Atu3001 +1.4 3.4 hypothetical protein compare
Atu3013 +1.3 4.9 hypothetical protein compare
Atu8159 +1.3 1.8 hypothetical protein compare
Atu4894 +1.3 7.0 transposase compare
Atu4896 +1.3 3.2 acetyltransferase compare
Atu4890 +1.3 3.5 IS426 transposase compare
Atu4144 +1.3 1.8 hypothetical protein compare
Atu0225 +1.3 1.6 hypothetical protein compare
Atu2439 +1.2 1.4 hypothetical protein compare
Atu0188 +1.2 1.5 ABC transporter, membrane spanning protein (peptide) compare
Atu3010 +1.2 7.1 hypothetical protein compare
Atu2239 +1.2 1.4 ubiquinol-cytochrome C reductase iron-sulfur subunit compare
Atu4892 +1.2 8.4 hypothetical protein compare
Atu3763 +1.2 1.6 hypothetical protein compare
Atu4889 +1.1 6.0 hypothetical protein compare
Atu2787 +1.1 1.0 hypothetical protein compare
Atu1359 +1.1 1.0 dnaK deletion suppressor protein compare
Atu4884 +1.1 3.7 hypothetical protein compare
Atu2554 +1.1 2.1 lysyl-tRNA synthetase compare
Atu2790 +1.1 1.5 3-isopropylmalate dehydratase, small subunit compare
Atu3721 +1.1 2.6 hypothetical protein compare
Atu8202 +1.0 3.4 hypothetical protein compare
Atu0926 +1.0 4.2 hypothetical protein compare
Atu0640 +1.0 2.6 hypothetical protein compare
Atu4882 +1.0 3.0 hypothetical protein compare
Atu0189 +1.0 2.9 ABC transporter, membrane spanning protein (peptide) compare
Atu1175 +1.0 1.8 hypothetical protein compare
Atu3461 +1.0 2.6 GntR family transcriptional regulator compare
Atu0769 +1.0 1.3 protoheme IX farnesyltransferase compare
Atu0340 +1.0 1.7 SAM dependent methyltransferase compare
Atu1333 +1.0 2.7 outer membrane protein compare
Atu2489 +1.0 4.2 hypothetical protein compare
Atu0565 +0.9 2.9 hypothetical protein compare
Atu3032 +0.9 3.3 hypothetical protein compare
Atu0046 +0.9 5.0 hypothetical protein compare
Atu0346 +0.9 1.2 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu0540 +0.9 1.8 hypothetical protein compare
Atu1573 +0.9 1.6 hypothetical protein compare
Atu1056 +0.9 2.9 hypothetical protein compare
Atu3006 +0.9 4.1 hypothetical protein compare
Atu0190 +0.9 3.5 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu2017 +0.9 0.8 hypothetical protein compare
Atu2368 +0.9 1.4 hypothetical protein compare
Atu4887 +0.9 3.5 hypothetical protein compare
Atu4149 +0.9 5.7 UDP-glucose 6-dehydrogenase compare
Atu0319 +0.9 1.2 ubiquinone biosynthesis protein compare
Atu0026 +0.9 1.0 hypothetical protein compare
Atu0931 +0.8 6.2 penicillin binding protein compare
Atu1803 +0.8 3.0 cold shock protein compare
Atu1529 +0.8 1.4 nitrogen fixation protein FixH compare
Atu0354 +0.8 1.2 ferric uptake regulator compare
Atu2684 +0.8 0.8 hypothetical protein compare
Atu1801 +0.8 2.3 hypothetical protein compare
Atu1754 +0.8 0.8 hypothetical protein compare
Atu2710 +0.8 3.4 hypothetical protein compare
Atu3016 +0.8 3.7 phosphoglyceromutase compare
Atu0976 +0.8 1.0 cycL protein compare
Atu2692 +0.8 3.0 intracellular septation protein compare
Atu3019 +0.8 5.6 hypothetical protein compare
Atu2592 +0.8 3.0 hypothetical protein compare
Atu1030 +0.8 0.8 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu3021 +0.8 5.0 sugar ABC transporter ATPase compare
Atu4888 +0.8 3.1 hypothetical protein compare
Atu5427 +0.8 1.6 hypothetical protein compare
Atu3754 +0.8 1.2 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu3018 +0.8 2.9 hypothetical protein compare
Atu8154 +0.8 2.3 Plasmid stabilization system protein compare
Atu1566 +0.8 0.9 hypothetical protein compare
Atu0925 +0.8 1.6 hypothetical protein compare
Atu3486 +0.8 2.0 DeoR family transcriptional regulator compare
Atu3015 +0.8 3.4 hypothetical protein compare
Atu0746 +0.8 1.2 hypothetical protein compare
Atu2793 +0.8 2.2 cobyrinic acid a,c-diamide synthase compare
Atu1774 +0.8 3.7 ABC transporter, substrate binding protein (peptide) compare
Atu2648 +0.7 1.8 hypothetical protein compare
Atu0377 +0.7 2.0 hypothetical protein compare
Atu0971 +0.7 2.2 two component sensor kinase compare
Atu3739 +0.7 1.4 phosphoglycerate kinase compare
Atu1904 +0.7 0.9 transcriptional regulator compare
Atu4480 +0.7 2.6 hypothetical protein compare
Atu8032 +0.7 1.4 hypothetical protein compare
Atu2058 +0.7 1.4 hypothetical protein compare
Atu1525 +0.7 2.4 hypothetical protein compare
Atu0185 +0.7 2.7 methylglyoxal synthase compare
Atu4773 +0.7 0.8 two component response regulator compare
Atu2683 +0.7 1.2 hypothetical protein compare
Atu5157 +0.7 2.5 hypothetical protein compare
Atu2479 +0.7 1.2 tRNA-Gly compare
Atu0977 +0.7 1.7 serine protease DO-like protease compare
Atu4869 +0.7 2.3 hypothetical protein compare
Atu0124 +0.7 1.5 hypothetical protein compare
Atu3634 +0.7 3.6 penicillin-binding protein dacf precursor compare
Atu2577 +0.7 5.7 ABC transporter, nucleotide binding/ATPase protein compare
Atu0533 +0.7 1.0 putative inhibitor of septum formation compare
Atu0040 +0.7 0.5 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu1763 +0.7 3.2 hypothetical protein compare
Atu3027 +0.7 4.5 dehydrogenase compare
Atu4875 +0.7 4.0 hypothetical protein compare
Atu1889 +0.7 2.1 diacylglycerol kinase compare
Atu4792 +0.7 1.3 hypothetical protein compare
Atu4876 +0.7 4.7 oxidoreductase compare
Atu1528 +0.7 3.5 nitrogen fixation protein FixI compare
Atu2237 +0.7 1.5 cytochrome c1 compare
Atu4452 +0.7 2.2 hypothetical protein compare
Atu4409 +0.7 2.1 periplasmic nitrate reductase small subunit compare
Atu8034 +0.7 1.3 hypothetical protein compare
Atu1023 +0.7 1.4 hypothetical protein compare
Atu2200 +0.7 1.6 cold shock protein compare
Atu1534 +0.7 1.5 cytochrome-c oxidase, FixP chain compare
Atu3023 +0.7 3.8 sugar ABC transporter permease compare
Atu8029 +0.7 1.3 hypothetical protein compare
Atu1645 +0.7 3.6 ABC transporter, substrate binding protein compare
Atu0647 +0.7 2.1 phosphoribosylamine--glycine ligase compare
Atu3886 +0.6 3.9 lysophospholipase compare
Atu1213 +0.6 1.4 hypothetical protein compare
Atu1040 +0.6 2.0 MFS permease compare
Atu2238 +0.6 1.7 ubiquinol-cytochrome c reductase cytochrome b subunit compare
Atu2584 +0.6 1.9 hypothetical protein compare
Atu1646 +0.6 2.6 ABC transporter, nucleotide binding/ATPase protein compare
Atu2677 +0.6 1.8 protein tyrosine phosphatase compare
Atu4234 +0.6 2.3 amino acid ABC transporter permease compare
Atu1536 +0.6 1.3 cytochrome C oxidase, FixO chain compare
Atu1653 +0.6 2.5 hypothetical protein compare
Atu4881 +0.6 3.0 hypothetical protein compare
Atu1291 +0.6 1.5 hypothetical protein compare
Atu4877 +0.6 4.4 short-chain dehydrogenase compare
Atu4159 +0.6 1.7 AsnC family transcriptional regulator compare
Atu4132 +0.6 2.1 AraC family transcriptional regulator compare
Atu1835 +0.6 1.4 hypothetical protein compare
Atu0477 +0.6 0.9 hypothetical protein compare
Atu4880 +0.6 3.9 AraC family transcriptional regulator compare
Atu3011 +0.6 1.3 ArsR family transcriptional regulator compare
Atu3022 +0.6 3.2 sugar ABC transporter permease compare
Atu0986 +0.6 0.8 hypothetical protein compare
Atu4874 +0.6 3.4 hypothetical protein compare
Atu3619 +0.6 1.4 hypothetical protein compare
Atu1953 +0.6 3.1 hypothetical protein compare
Atu2052 +0.6 2.6 hypothetical protein compare
Atu1141 +0.6 2.1 Phosphoribosylglycinamide synthetase compare
Atu0585 +0.6 0.9 hypothetical protein compare
Atu4665 +0.6 2.1 alpha-galactosidase compare
Atu3516 +0.6 1.6 MutT family NTP pyrophosphatase compare
Atu2583 +0.6 4.0 glycosyltransferase compare
Atu2590 +0.6 3.5 hypothetical protein compare
Atu3746 +0.6 1.3 hypothetical protein compare
Atu2815 +0.6 2.5 hypothetical protein compare
Atu1692 +0.6 1.7 hypothetical protein compare
Atu1103 +0.6 1.3 rRNA-adenine N6,N6-dimethyltransferase compare
Atu0471 +0.6 1.0 hypothetical protein compare
Atu3519 +0.6 2.3 peptidyl-prolyl cis-trans isomerase compare
Atu4213 +0.6 2.0 hypothetical protein compare
Atu1666 +0.6 2.4 hypothetical protein compare
Atu8035 +0.6 1.2 hypothetical protein compare
Atu1530 +0.6 2.2 nitrogen fixation protein FixG compare
Atu0883 +0.6 1.6 hypothetical protein compare
Atu4860 +0.6 3.7 hypothetical protein compare
Atu0862 +0.6 1.8 hypothetical protein compare
Atu0973 +0.6 1.7 cycH protein compare
Atu4866 +0.6 2.9 hypothetical protein compare
Atu4861 +0.6 2.9 IS21 family transposase compare
Atu4865 +0.6 2.7 oxidoreductase compare
Atu1727 +0.6 1.5 hypothetical protein compare
Atu3024 +0.6 3.7 sugar ABC transporter permease compare
Atu1499 +0.6 3.0 penicillin binding protein compare
Atu1232 +0.6 1.0 hypothetical protein compare
Atu2462 +0.6 1.4 hypothetical protein compare
Atu0795 +0.5 1.0 hypothetical protein compare
Atu1173 +0.5 2.1 MFS permease compare
Atu4527 +0.5 0.9 hypothetical protein compare
Atu3566 +0.5 1.4 hypothetical protein compare
Atu0495 +0.5 1.5 hypothetical protein compare
Atu0184 +0.5 1.0 glucokinase compare
Atu2803 +0.5 1.5 Cobalamin biosynthesis associated protein compare
Atu3025 +0.5 3.9 oligo alginate lyase compare
Atu2605 +0.5 1.5 hypothetical protein compare
Atu0562 +0.5 1.4 flagellar motor switch protein FliN compare
Atu3780 +0.5 1.9 hypothetical protein compare
Atu1007 +0.5 0.9 hypothetical protein compare
Atu3427 +0.5 1.4 hypothetical protein compare
Atu3688 +0.5 1.1 iron(III ABC transporter permease dicitrate ABC transporter permease compare
Atu0102 +0.5 2.2 exopolysaccharide production protein compare
Atu2827 +0.5 1.7 hypothetical protein compare
Atu4416 +0.5 1.6 phosphopantetheinyl transferase compare
Atu0353 +0.5 1.8 acetyltransferase compare
Atu1366 +0.5 2.0 hypothetical protein compare
Atu5468 +0.5 1.0 hypothetical protein compare
Atu3040 +0.5 3.4 hypothetical protein compare
Atu1041 +0.5 1.8 methyltransferase compare
Atu3020 +0.5 2.2 GntR family transcriptional regulator compare
Atu3910 +0.5 1.9 LamB/YcsF family protein compare
Atu2582 +0.5 2.0 UDP-glucose/GDP-mannose dehydrogenase compare
Atu1846 +0.5 0.8 hypothetical protein compare
Atu1264 +0.5 1.4 hypothetical protein compare
Atu3892 +0.5 1.1 hypothetical protein compare
Atu0935 +0.5 1.3 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Agrobacterium fabrum C58 in nophagecontrol experiments