Experiment set16S193 for Agrobacterium fabrum C58

Compare to:

AgroPhage_A01

200 most important genes:

  gene name fitness t score description  
Atu3469 -3.1 -2.8 phosphoglyceromutase compare
Atu2125 -3.0 -1.6 ABC transporter, nucleotide binding/ATPase protein compare
Atu1446 -2.5 -1.9 two component response regulator compare
Atu1688 -2.5 -6.1 indole-3-glycerol-phosphate synthase compare
Atu0422 -1.9 -2.2 ABC transporter, membrane spanning protein compare
Atu0331 -1.8 -2.4 sigma-54 modulation protein compare
Atu1687 -1.8 -5.4 anthranilate phosphoribosyltransferase compare
Atu0041 -1.6 -1.9 glutamine amidotransferase compare
Atu2368 -1.6 -1.5 hypothetical protein compare
Atu2017 -1.5 -1.1 hypothetical protein compare
Atu0434 -1.5 -1.8 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu5451 -1.4 -1.3 hypothetical protein compare
Atu2684 -1.4 -1.1 hypothetical protein compare
Atu1503 -1.3 -1.2 hypothetical protein compare
Atu4614 -1.3 -5.5 glycosyltransferase compare
Atu8018 -1.3 -1.1 hypothetical protein compare
Atu4609 -1.3 -6.9 glycosyltransferase compare
Atu2694 -1.3 -2.2 hypothetical protein compare
Atu0971 -1.2 -2.5 two component sensor kinase compare
Atu0017 -1.2 -2.0 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu1026 -1.2 -2.0 hypothetical protein compare
Atu4317 -1.2 -1.7 TetR family transcriptional regulator compare
Atu4615 -1.2 -6.6 glucose-1-phosphate thymidylyltransferase compare
Atu2140 -1.1 -1.9 hypothetical protein compare
Atu6098 -1.1 -0.7 transcriptional regulator, HTH family compare
Atu2073 -1.1 -2.2 membrane protein compare
Atu5470 -1.1 -1.0 hypothetical protein compare
Atu4072 -1.1 -1.1 nodulation protein N compare
Atu4618 -1.1 -5.7 dTDP-rhamnose-3,5-epimerase compare
Atu1457 -1.0 -2.5 hypothetical protein compare
Atu8176 -1.0 -1.6 hypothetical protein compare
Atu8161 -1.0 -1.5 hypothetical protein compare
Atu4050 -1.0 -1.5 UTP-glucose-1-phosphate uridylyltransferase compare
Atu0943 -1.0 -1.9 hypothetical protein compare
Atu1176 -1.0 -2.4 hypothetical protein compare
Atu4610 -1.0 -6.4 sugar nucleotide epimerase/dehydratase compare
Atu2057 -1.0 -1.9 DNA helicase II compare
Atu4608 -0.9 -6.1 hypothetical protein compare
Atu0769 -0.9 -0.9 protoheme IX farnesyltransferase compare
Atu0086 -0.9 -0.7 ribosome-binding factor A compare
Atu4617 -0.9 -4.1 dTDP-D-glucose-4,6-dehydratase compare
Atu3740 -0.9 -3.9 fructose bisphosphate aldolase compare
Atu2289 -0.9 -5.7 anthranilate synthase component I and II compare
Atu1219 -0.9 -0.9 hypothetical protein compare
Atu2293 -0.9 -1.4 hypothetical protein compare
Atu1679 -0.9 -1.7 peptidyl prolyl cis-trans isomerase compare
Atu5163 -0.9 -1.6 type IV secretion protein AvhB2 compare
Atu2620 -0.9 -1.1 hypothetical protein compare
Atu1686 -0.9 -5.3 peptidyl-prolyl cis-trans isomerse D compare
Atu2379 -0.8 -4.7 phosphomannomutase compare
Atu2192 -0.8 -0.9 hypothetical protein compare
Atu0029 -0.8 -2.3 S-adenosylhomocysteine hydrolase compare
Atu3353 -0.8 -4.3 mannose-1-phosphate guanylyltransferase compare
Atu8052 -0.8 -1.3 hypothetical protein compare
Atu4613 -0.8 -4.4 glycosyltransferase compare
Atu6153 -0.8 -2.3 conserved hypothetical protein compare
Atu1110 -0.7 -2.4 cytosol aminopeptidase compare
Atu2728 -0.7 -2.1 beta (1-->2) glucan export ATP-binding protein compare
Atu8096 -0.7 -1.2 hypothetical protein compare
Atu2115 -0.7 -3.4 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
Atu1470 -0.7 -0.6 Camphor resistance protein compare
Atu0026 -0.7 -0.7 hypothetical protein compare
Atu1667 -0.7 -1.1 hypothetical protein compare
Atu4137 -0.7 -2.2 hypothetical protein compare
Atu0638 -0.7 -1.0 hypothetical protein compare
Atu1021 -0.7 -1.0 outer membrane protein compare
Atu4407 -0.7 -1.4 periplasmic nitrate reductase, NapD protein compare
Atu4469 -0.7 -1.6 iron ABC transporter permease compare
Atu3311 -0.7 -4.6 phosphomannose isomerase compare
Atu2344 -0.7 -1.1 lactoylglutathione lyase compare
Atu5161 -0.7 -3.5 hypothetical protein compare
Atu2832 -0.7 -1.6 tRNA modification GTPase compare
Atu2352 -0.7 -0.9 hypothetical protein compare
Atu2478 -0.7 -1.9 hypothetical protein compare
Atu0746 -0.7 -1.5 hypothetical protein compare
Atu0520 -0.6 -2.2 chemotaxis receiver protein compare
Atu6165 -0.6 -0.7 hypothetical protein compare
Atu1644 -0.6 -2.2 hypothetical protein compare
Atu4711 -0.6 -1.9 two component sensor kinase compare
Atu0119 -0.6 -0.8 hypothetical protein compare
Atu4792 -0.6 -1.1 hypothetical protein compare
Atu2555 -0.6 -1.0 L-lysine 2,3-aminomutase compare
Atu2380 -0.6 -1.3 hypothetical protein compare
Atu2063 -0.6 -1.0 hypothetical protein compare
Atu1307 -0.6 -1.9 dihydroorotase compare
Atu4360 -0.6 -2.3 sugar ABC transporter permease compare
Atu4641 -0.6 -1.5 LysR family transcriptional regulator compare
Atu0298 -0.6 -2.0 orotidine 5 compare
Atu1359 -0.6 -0.4 dnaK deletion suppressor protein compare
Atu8023 -0.6 -0.8 hypothetical protein compare
Atu0986 -0.6 -0.7 hypothetical protein compare
Atu1225 -0.6 -0.8 hypothetical protein compare
Atu8143 -0.6 -1.7 hypothetical protein compare
Atu0051 -0.6 -2.0 two component sensor kinase compare
Atu0109 -0.6 -2.0 transcriptional regulator, MarR family compare
Atu4616 -0.6 -0.5 dTDP-4-dehydrorhamnose reductase compare
Atu0339 -0.6 -1.8 hypothetical protein compare
Atu0025 -0.6 -1.1 hypothetical protein compare
Atu0718 -0.6 -1.5 hypothetical protein compare
Atu5146 -0.6 -1.6 hypothetical protein compare
Atu0220 -0.6 -2.3 components of type IV pilus compare
Atu2183 -0.6 -2.5 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu1685 -0.6 -0.6 hypothetical protein compare
Atu8063 -0.6 -1.7 hypothetical protein compare
Atu3901 -0.6 -1.7 nitrite reductase small subunit compare
Atu0063 -0.6 -2.4 ABC transporter, substrate binding protein (sugar) compare
Atu1083 -0.6 -1.9 hypothetical protein compare
Atu4605 -0.6 -1.7 IS3 family transposase compare
Atu4527 -0.5 -0.8 hypothetical protein compare
Atu0753 -0.5 -3.1 3,4-dihydroxy-2-butanone-4-phoshate synthase/GTP cyclohydrolase II compare
Atu5158 -0.5 -2.1 hypothetical protein compare
Atu5142 -0.5 -1.1 hypothetical protein compare
Atu1495 -0.5 -1.4 hypothetical protein compare
Atu6036 -0.5 -0.5 entry-exclusion protein compare
Atu4070 -0.5 -1.3 sarcosine oxidase gamma subunit compare
Atu3393 -0.5 -0.9 pseudoazurin compare
Atu1291 -0.5 -1.1 hypothetical protein compare
Atu0528 -0.5 -1.6 large conductance mechanosensitive channel protein compare
Atu3554 -0.5 -1.9 hypothetical protein compare
Atu2680 -0.5 -2.0 ABC transporter, nucleotide binding/ATPase protein compare
Atu8165 -0.5 -1.5 hypothetical protein compare
Atu1677 -0.5 -1.8 queuine tRNA-ribosyltransferase compare
Atu4362 -0.5 -1.4 hypothetical protein compare
Atu2433 -0.5 -0.7 hypothetical protein compare
Atu0386 -0.5 -0.9 hypothetical protein compare
Atu2077 -0.5 -1.3 DNA polymerase III, epsilon subunit compare
Atu4361 -0.5 -2.7 sugar ABC transporter substrate-binding protein compare
Atu2205 -0.5 -1.5 transcriptional regulator, MarR family compare
Atu3598 -0.5 -0.4 thiol:disulfide interchange protein compare
Atu0486 -0.5 -1.3 dihydroorotate dehydrogenase compare
Atu4101 -0.5 -2.2 hypothetical protein compare
Atu8054 -0.5 -0.5 hypothetical protein compare
Atu2827 -0.5 -1.1 hypothetical protein compare
Atu0242 -0.5 -2.2 carbon-nitrogen hydrolase compare
Atu3491 -0.5 -1.3 hypothetical protein compare
Atu3387 -0.5 -1.3 sigma factor compare
Atu0997 -0.5 -1.4 hypothetical protein compare
Atu3575 -0.5 -2.4 xylose ABC transporter permease compare
Atu0705 -0.5 -2.7 3-oxoacyl-(acyl carrier protein) reductase compare
Atu3957 -0.5 -1.9 glycine-betaine ABC transporter substrate-binding protein compare
Atu3182 -0.5 -1.2 hypothetical protein compare
Atu0923 -0.5 -1.7 hypothetical protein compare
Atu1874 -0.5 -0.9 RecA protein compare
Atu2564 -0.5 -2.2 molybdenum-binding transcriptional repressor compare
Atu3699 -0.5 -1.2 hypothetical protein compare
Atu3427 -0.5 -1.1 hypothetical protein compare
Atu4214 -0.5 -1.6 cold shock protein compare
Atu3120 -0.5 -0.5 hypothetical protein compare
Atu8196 -0.5 -2.2 hypothetical protein compare
Atu3911 -0.5 -1.0 hypothetical protein compare
Atu2442 -0.5 -0.7 hypothetical protein compare
Atu0413 -0.5 -1.1 stress induced protein compare
Atu3510 -0.5 -1.2 amidohydrolase compare
Atu1573 -0.5 -0.5 hypothetical protein compare
Atu1221 -0.5 -1.8 hypothetical protein compare
Atu3227 -0.5 -2.1 AraC family transcriptional regulator compare
Atu5045 -0.5 -1.2 hypothetical protein compare
Atu5046 -0.5 -2.7 hypothetical protein compare
Atu3999 -0.5 -1.3 dithiobiotin synthetase compare
Atu1057 -0.4 -2.4 ADP-Ribose Pyrophosphatase compare
Atu1449 -0.4 -1.8 potassium uptake protein compare
Atu0162 -0.4 -1.2 biopolymer transport protein compare
Atu1293 -0.4 -1.8 hypothetical protein compare
Atu3160 -0.4 -0.8 hypothetical protein compare
Atu0983 -0.4 -1.1 hypothetical protein compare
Atu3750 -0.4 -1.4 thiamine-phosphate pyrophosphorylase compare
Atu0538 -0.4 -1.7 hypothetical protein compare
Atu2120 -0.4 -1.3 O-methyltransferase compare
Atu0369 -0.4 -1.3 hypothetical protein compare
Atu3775 -0.4 -0.7 hypothetical protein compare
Atu3763 -0.4 -0.5 hypothetical protein compare
Atu3841 -0.4 -2.3 hypothetical protein compare
Atu3313 -0.4 -0.9 hypothetical protein compare
Atu3256 -0.4 -1.5 zinc-binding dehydrogenase compare
Atu2795 -0.4 -1.6 cobalamin biosynthetic protein compare
Atu1694 -0.4 -1.0 hypothetical protein compare
Atu3121 -0.4 -0.4 cold shock protein compare
Atu6158 -0.4 -1.7 conserved hypothetical protein compare
Atu0401 -0.4 -2.3 fructokinase compare
Atu1241 -0.4 -1.2 hypothetical protein compare
Atu2270 -0.4 -0.6 ATP-dependent Clp protease, proteolytic subunit compare
Atu0498 -0.4 -1.7 hypothetical protein compare
Atu3915 -0.4 -1.1 MerR family transcriptional regulator compare
Atu8129 -0.4 -2.3 hypothetical protein compare
Atu5107 -0.4 -1.5 hypothetical protein compare
Atu0277 -0.4 -1.8 hypothetical protein compare
Atu5485 -0.4 -0.9 hypothetical protein compare
Atu2208 -0.4 -0.9 secretion chaperone compare
Atu3528 -0.4 -2.4 oxidoreductase compare
Atu1872 -0.4 -1.5 hypothetical protein compare
Atu2204 -0.4 -0.8 hypothetical protein compare
Atu2456 -0.4 -1.1 lactoylglutathione lyase compare
Atu4093 -0.4 -1.0 hypothetical protein compare
Atu1077 -0.4 -1.1 DNA repair protein compare
Atu1041 -0.4 -1.9 methyltransferase compare
Atu1475 -0.4 -0.7 hypothetical protein compare
Atu5183 -0.4 -2.1 hypothetical protein compare
Atu8010 -0.4 -1.4 hypothetical protein compare
Atu2041 -0.4 -0.7 acetyltransferase compare
Atu0847 -0.4 -1.6 organic hydroperoxide resistance protein compare


Specific Phenotypes

For 10 genes in this experiment