Experiment set16IT020 for Pseudomonas putida KT2440

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L-Isoleucine carbon source

Genes with specific phenotypes:

  gene name fitness t score description  
PP_4401 -6.7 -6.5 branched-chain alpha-keto acid dehydrogenase complex, alpha subunit conserved
PP_4400 -6.7 -7.9 Bkd operon transcriptional regulator conserved
PP_4403 -6.5 -9.0 Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex conserved
PP_4402 -5.8 -14.3 branched-chain alpha-keto acid dehydrogenase complex, beta subunit conserved
PP_2216 -4.8 -8.4 short-chain acyl-CoA dehydrogenase conserved
PP_2211 -3.6 -9.6 Transcriptional regulator, AraC family conserved
PP_1138 -3.3 -6.0 branched chain amino acid transporter - ATP binding subunit compare
PP_4404 -3.3 -9.4 dihydrolipoyl dehydrogenase component of branched-chain alpha-keto acid dehydrogenase complex conserved
PP_2213 -3.0 -7.4 putative acyl-CoA synthetase conserved
PP_1139 -2.7 -14.9 branched chain amino acid transporter - permease subunit conserved
PP_0881 -2.5 -7.7 dipeptide ABC transporter - putative membrane subunit compare
PP_1137 -2.4 -9.9 high-affinity branched-chain amino acid transporter, ATP binding conserved
PP_1141 -2.4 -10.6 branched-chain amino acids ABC transporter - periplasmic leucine binding subunit conserved
PP_1140 -2.3 -12.8 branched chain amino acid transporter - permease subunit conserved
PP_0879 -2.2 -6.9 dipeptide ABC transporter - putative ATP binding subunit compare
PP_4863 -2.0 -12.6 high-affinity branched-chain amino acid transporter, ATP-binding compare
PP_4666 -1.9 -6.2 3-hydroxyisobutyrate dehydrogenase conserved
PP_0878 -1.9 -8.5 dipeptide ABC transporter, binding subunit compare
PP_4866 -1.8 -11.9 High-affinity branched-chain amino acid transport system permease protein BraD conserved
PP_4864 -1.8 -12.0 High-affinity branched-chain amino acid transport ATP-binding protein BraF conserved
PP_4865 -1.8 -11.4 High-affinity branched-chain amino acid transport system permease protein BraE conserved
PP_4667 -1.7 -8.9 methylmalonate-semialdehyde dehydrogenase conserved
PP_4867 -1.6 -9.0 branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein (braC-like) conserved
PP_4947 +1.5 14.0 proline dehydrogenase/1-pyrroline-5-carboxylate dehydrogenase conserved
PP_4754 +1.6 13.3 Transcriptional regulator, TetR family compare


Specific phenotypes for carbon source L-Isoleucine across organisms