Experiment set16IT014 for Pseudomonas putida KT2440

Compare to:

Ethanol carbon source

200 most important genes:

  gene name fitness t score description  
PP_0293 -6.7 -4.6 Imidazole glycerol phosphate synthase subunit HisF compare
PP_5014 -5.6 -5.4 Phosphoribosyl-AMP cyclohydrolase compare
PP_0184 -5.0 -8.3 Argininosuccinate lyase compare
PP_0082 -4.9 -6.7 tryptophan synthase alpha chain compare
PP_4723 -4.8 -18.8 Carbamoyl-phosphate synthase large chain compare
PP_3511 -4.8 -13.4 Branched-chain-amino-acid aminotransferase compare
PP_4678 -4.7 -19.0 Ketol-acid reductoisomerase compare
PP_1988 -4.7 -12.0 3-isopropylmalate dehydrogenase compare
PP_0083 -4.6 -8.9 tryptophan synthase beta chain compare
PP_0422 -4.6 -9.4 Indole-3-glycerol phosphate synthase compare
PP_0691 -4.6 -7.0 Glutamate 5-kinase compare
PP_4680 -4.5 -19.9 acetohydroxybutanoate synthase / acetolactate synthase compare
PP_0290 -4.5 -10.8 Imidazole glycerol phosphate synthase subunit HisH compare
PP_4999 -4.4 -4.2 dihydroorotase-like protein compare
PP_4724 -4.4 -9.5 Carbamoyl-phosphate synthase small chain compare
PP_4909 -4.2 -11.9 phosphoserine phosphatase compare
PP_1995 -4.1 -12.0 N-(5'-phosphoribosyl)anthranilate isomerase compare
PP_1986 -4.0 -5.4 3-isopropylmalate dehydratase small subunit compare
PP_0417 -3.9 -20.2 Anthranilate synthase component 1 compare
PP_0967 -3.9 -12.3 histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) compare
PP_4116 -3.8 -14.8 isocitrate lyase compare
PP_4890 -3.8 -9.4 ATP phosphoribosyltransferase regulatory subunit compare
PP_4679 -3.7 -8.7 acetohydroxybutanoate synthase / acetolactate synthase compare
PP_5185 -3.7 -8.4 acetylglutamate kinase-like protein (regulatory domain)/amino acid N-acetyltransferase compare
PP_0966 -3.7 -11.6 Histidinol dehydrogenase compare
PP_4696 -3.7 -8.8 Nitrogen regulation protein NR(I) compare
PP_1088 -3.7 -14.0 Argininosuccinate synthase compare
PP_0289 -3.7 -8.3 Imidazoleglycerol-phosphate dehydratase compare
PP_5015 -3.6 -7.9 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
PP_5659 -3.6 -5.2 protein of unknown function compare
PP_5289 -3.6 -6.2 Acetylglutamate kinase compare
PP_5155 -3.5 -7.6 D-3-phosphoglycerate dehydrogenase / alpha-ketoglutarate reductase compare
PP_2371 -3.5 -10.4 Sulphite reductase hemoprotein, beta subunit compare
PP_4799 -3.5 -5.3 putative Muramoyltetrapeptide carboxypeptidase compare
PP_0421 -3.5 -8.1 Anthranilate phosphoribosyltransferase compare
PP_0292 -3.5 -3.5 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
PP_0965 -3.5 -13.2 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
PP_5097 -3.5 -17.4 homoserine O-acetyltransferase compare
PP_0356 -3.4 -12.6 malate synthase G compare
PP_5128 -3.4 -7.6 Dihydroxy-acid dehydratase compare
PP_2370 -3.3 -4.2 conserved protein of unknown function compare
PP_1985 -3.2 -9.0 3-isopropylmalate dehydratase large subunit compare
PP_1079 -3.1 -6.5 Ornithine carbamoyltransferase compare
PP_3999 -3.0 -11.2 Uroporphyrinogen-III C-methyltransferase/Precorrin-2 dehydrogenase/Sirohydrochlorin ferrochelatase compare
PP_5098 -3.0 -11.0 methionine biosynthesis protein MetW compare
PP_1025 -3.0 -10.8 2-isopropylmalate synthase compare
PP_2001 -2.9 -10.7 O-succinylhomoserine sulfhydrylase compare
PP_0420 -2.5 -10.3 aminodeoxychorismate synthase / para-aminobenzoate synthase multi-enzyme complex compare
PP_0164 -2.5 -10.1 conserved protein of unknown function compare
PP_4487 -2.5 -19.7 acetyl-CoA synthetase conserved
PP_4693 -2.5 -7.0 RNA polymerase-binding transcription factor DksA compare
PP_0127 -2.4 -9.3 Thiol:disulfide interchange protein compare
PP_0787 -2.3 -7.5 quinolinate phosphoribosyltransferase (decarboxylating) monomer compare
PP_0393 -2.3 -3.4 putative 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase compare
PP_1231 -2.3 -6.5 quinolinate synthase [4Fe-4S] cluster subunit compare
PP_1656 -2.3 -8.7 ATP:GTP 3'-pyrophosphotransferase compare
PP_2327 -2.2 -9.0 transcriptional dual regulator / CysB-O-acetyl-L-serine compare
PP_4943 -2.1 -2.9 putative Glycosyl transferase compare
PP_4364 -2.1 -7.5 putative Anti-sigma F factor antagonist compare
PP_0381 -2.1 -10.8 Coenzyme PQQ synthesis protein F compare
PP_2328 -2.1 -6.0 Phosphoadenosine phosphosulfate reductase compare
PP_1109 -2.1 -12.6 Transcriptional regulator, GntR family compare
PP_0291 -2.1 -2.8 conserved protein of unknown function compare
PP_1734 -2.0 -3.7 Probable septum site-determining protein MinC compare
PP_0809 -1.9 -10.9 disulfide bond formation protein B compare
PP_4700 -1.9 -3.9 pantothenate synthetase compare
PP_5095 -1.9 -2.2 pyrroline-5-carboxylate reductase compare
PP_3821 -1.9 -10.1 UTP-glucose-1-phosphate uridylyltransferase compare
PP_1111 -1.9 -5.9 putative Synthetase compare
PP_0376 -1.8 -9.1 Coenzyme PQQ synthesis protein E compare
PP_1110 -1.8 -2.2 serine acetyltransferase compare
PP_4004 -1.7 -4.0 DNA translocase FtsK compare
PP_2000 -1.7 -1.6 amidophosphoribosyl transferase compare
PP_2665 -1.6 -6.5 Glycerol metabolism activator compare
PP_1654 -1.6 -3.9 cysteine synthase B compare
PP_2390 -1.5 -8.0 Transcriptional regulator, LysR family compare
PP_5303 -1.5 -6.3 aminoacrylate/iminopropionate hydrolase/deaminase compare
PP_2675 -1.5 -4.2 Cytochrome c-type protein compare
PP_1783 -1.5 -2.9 dTDP-glucose pyrophosphorylase compare
PP_2682 -1.5 -6.6 Fe-containing alcohol dehydrogenase compare
PP_0379 -1.5 -6.9 Coenzyme PQQ synthesis protein B compare
PP_4131 -1.4 -5.6 NADH-quinone oxidoreductase subunit N compare
PP_0378 -1.4 -8.3 Pyrroloquinoline-quinone synthase compare
PP_1493 -1.4 -3.6 chemotaxis response regulator protein-glutamate methylesterase of group 3 operon compare
PP_t12 -1.4 -1.9 tRNA-Thr compare
PP_4964 -1.4 -3.4 D-erythrose 4-phosphate dehydrogenase compare
PP_0888 -1.4 -2.1 Photosynthetic apparatus regulatory protein RegA compare
PP_2683 -1.3 -7.3 putative sensory box histidine kinase/response regulator compare
PP_5347 -1.3 -10.1 pyruvate carboxylase subunit A compare
PP_1215 -1.3 -2.4 Crossover junction endodeoxyribonuclease RuvC compare
PP_3484 -1.3 -5.6 Response regulator receiver protein compare
PP_0914 -1.3 -8.8 GGDEF domain protein compare
PP_5346 -1.2 -8.4 pyruvate carboxylase subunit B compare
PP_4940 -1.2 -6.1 Putative glycosyltransferase compare
PP_5227 -1.2 -7.2 diaminopimelate decarboxylase compare
PP_2388 -1.2 -3.8 Transporter, LysE family compare
PP_1664 -1.2 -2.8 phosphoribosylglycinamide formyltransferase 1 compare
PP_4722 -1.2 -4.7 Transcription elongation factor GreA compare
PP_4695 -1.2 -6.2 Sensory box histidine kinase compare
PP_1912 -1.1 -5.1 Phosphate acyltransferase compare
PP_1826 -1.1 -2.4 Hydrolase, isochorismatase family compare
PP_0846 -1.1 -2.0 DnaK-like molecular chaperone specific for IscU compare
PP_5348 -1.1 -6.3 Transcriptional regulator, LysR family compare
PP_3398 -1.1 -3.3 putative Curli fiber surface-exposed nucleator CsgB compare
PP_4124 -1.0 -4.3 NADH-quinone oxidoreductase subunit G compare
PP_3649 -1.0 -3.2 Transcriptional regulator, GntR family compare
PP_0377 -1.0 -2.3 coenzyme PQQ synthesis protein D compare
PP_1217 -1.0 -3.4 Holliday junction ATP-dependent DNA helicase RuvB compare
PP_2999 -1.0 -2.6 Glyoxalase family protein compare
PP_3245 -1.0 -2.8 conserved protein of unknown function compare
PP_2976 -1.0 -2.3 putative transposase compare
PP_4699 -0.9 -2.4 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
PP_4122 -0.9 -1.9 proton-pumping NADH:ubiquinone oxidoreductase, respiratory complex I, subunit E compare
PP_4121 -0.9 -4.0 NADH-quinone oxidoreductase subunit C/D compare
PP_4120 -0.9 -2.6 NADH-quinone oxidoreductase subunit B compare
PP_0435 -0.9 -7.4 Peptidase, M23/M37 family compare
PP_1293 -0.9 -2.2 molybdopterin synthase small subunit compare
PP_2414 -0.8 -1.1 conserved exported protein of unknown function compare
PP_0380 -0.8 -3.8 Coenzyme PQQ synthesis protein A compare
PP_2668 -0.8 -1.8 ABC efflux transporter, ATP-binding protein compare
PP_2389 -0.8 -3.7 conserved protein of unknown function compare
PP_1655 -0.8 -2.2 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD compare
PP_4129 -0.8 -2.8 NADH:ubiquinone oxidoreductase, membrane subunit L compare
PP_5456 -0.8 -2.2 conserved protein of unknown function compare
PP_1020 -0.8 -2.8 putative glucose-6-phosphate 1-epimerase compare
PP_4009 -0.8 -3.6 ATP-dependent Clp protease adapter protein ClpS compare
PP_1598 -0.8 -4.1 regulatory intramembrane protein RIP zinc protease compare
PP_0001 -0.8 -1.4 probable chromosome-partitioning protein compare
PP_4642 -0.8 -1.4 Cyclic diguanosine monophosphate-binding protein compare
PP_1733 -0.8 -1.6 membrane ATPase of the MinC-MinD-MinE system compare
PP_3790 -0.8 -5.5 diaminopimelate epimerase compare
PP_3903 -0.8 -2.2 conserved protein of unknown function compare
PP_5028 -0.8 -2.6 proline iminopeptidase compare
PP_2433 -0.8 -1.5 conserved protein of unknown function compare
PP_1589 -0.8 -5.4 uridylyltransferase compare
PP_4358 -0.8 -4.0 flagellar synthesis, switching and energizing component compare
PP_2672 -0.7 -3.4 Transcriptional activator protein ExaE compare
PP_2676 -0.7 -3.8 putative Periplasmic binding protein compare
PP_2667 -0.7 -5.0 ABC transporter compare
PP_4130 -0.7 -2.5 NADH:ubiquinone oxidoreductase, membrane subunit M compare
PP_5114 -0.7 -1.2 putative adenine methyltransferase compare
PP_4988 -0.7 -4.0 signal transduction histidine kinase CheA/CheY-like receiver compare
PP_2669 -0.7 -4.5 putative Outer membrane protein compare
PP_4726 -0.7 -2.1 Chaperone protein DnaJ compare
PP_2674 -0.7 -4.7 quinoprotein ethanol dehydrogenase compare
PP_1678 -0.7 -3.3 bifunctional cobinamide-P guanylyltransferase - adenosylcobinamide kinase compare
PP_0833 -0.7 -1.3 queuine tRNA-ribosyltransferase compare
PP_2820 -0.7 -2.1 HTH-type transcriptional regulator nfxB compare
PP_5748 -0.7 -1.6 cytochrome c heme lyase subunit compare
PP_4355 -0.7 -2.4 flagellar export apparatus subunit compare
PP_2018 -0.7 -3.8 adhesin-associated BNR repeat protein (from data) compare
PP_1455 -0.7 -2.2 conserved protein of unknown function compare
PP_0801 -0.7 -1.5 conserved exported protein of unknown function compare
PP_2322 -0.7 -3.8 Major outer membrane lipoprotein compare
PP_4828 -0.7 -1.5 Precorrin-8X methylmutase compare
PP_5054 -0.7 -1.8 glutaredoxin 3 compare
PP_1233 -0.7 -3.2 sulfurtransferase compare
PP_1038 -0.7 -2.3 conserved protein of unknown function compare
PP_5538 -0.7 -3.3 putative ABC transporter, substrate-binding protein compare
PP_1099 -0.7 -1.7 Cold shock protein CapB compare
PP_2671 -0.7 -4.2 Sensor histidine kinase compare
PP_3365 -0.7 -1.5 Acetolactate synthase compare
PP_1430 -0.6 -4.5 putative periplasmic serine endoprotease DegP-like compare
PP_4136 -0.6 -1.6 Transcriptional regulator, LuxR family compare
PP_5217 -0.6 -5.7 Polyphosphate kinase compare
PP_1941 -0.6 -3.5 conserved protein of unknown function compare
PP_4058 -0.6 -4.5 1,4-alpha-glucan branching enzyme compare
PP_3930 -0.6 -2.2 conserved exported protein of unknown function compare
PP_5230 -0.6 -2.6 Tyrosine recombinase XerC compare
PP_4936 -0.6 -3.3 O-antigen polymerase compare
PP_0513 -0.6 -1.7 DNA-binding transcriptional repressor NrdR-Zn2+-ATP/dATP compare
PP_5423 -0.6 -1.7 conserved membrane protein of unknown function compare
PP_1353 -0.6 -1.4 conserved membrane protein of unknown function compare
PP_1774 -0.6 -2.1 conserved exported protein of unknown function compare
PP_2087 -0.6 -1.9 CmpX protein compare
PP_1778 -0.6 -3.3 Lipopolysaccharide ABC export system, permease protein compare
PP_2324 -0.6 -4.3 tyr-sensitive phospho-2-dehydro-3-deoxyheptonate aldolase compare
PP_2679 -0.6 -4.7 quinoprotein ethanol dehydrogenase compare
PP_3505 -0.6 -1.2 conserved protein of unknown function compare
PP_4938 -0.6 -3.6 putative Glycosyl transferase compare
PP_0832 -0.6 -2.6 S-adenosylmethionine:tRNA ribosyltransferase-isomerase compare
PP_0362 -0.6 -4.7 Biotin synthase compare
PP_1468 -0.6 -1.4 Tyrosine recombinase XerD compare
PP_1779 -0.6 -3.1 Lipopolysaccharide ABC export system, ATP-binding protein compare
PP_3603 -0.6 -3.5 Transcriptional regulator, GntR family compare
PP_5359 -0.6 -1.7 CobW/P47K family protein compare
PP_3102 -0.6 -2.7 conserved protein of unknown function compare
PP_2345 -0.6 -2.3 conserved exported protein of unknown function compare
PP_5225 -0.6 -1.3 frataxin compare
PP_2793 -0.6 -1.8 Acyl-CoA dehydrogenase family protein compare
PP_1713 -0.6 -1.8 Transcriptional regulator PcaQ compare
PP_3392 -0.6 -1.6 conserved protein of unknown function compare
PP_2773 -0.6 -1.7 conserved protein of unknown function compare
PP_5035 -0.5 -3.1 Histidine utilization repressor compare
PP_1447 -0.5 -2.7 conserved protein of unknown function compare
PP_1702 -0.5 -2.3 Recombination-associated protein RdgC compare
PP_1764 -0.5 -3.0 Phosphoglycolate phosphatase 2 compare
PP_0643 -0.5 -1.3 protein of unknown function compare
PP_1804 -0.5 -4.5 Glycosyl transferase WbpL compare
PP_5083 -0.5 -1.9 putative Type IV pili biogenesis protein PilM compare


Specific Phenotypes

For 1 genes in this experiment

For carbon source Ethanol in Pseudomonas putida KT2440

For carbon source Ethanol across organisms