| | gene | name | fitness | t score | description | |
|---|
| b1361 | ydaW | -2.8 | -1.2 | orf, hypothetical protein (VIMSS) | compare |
| b2912 | ygfA | -2.7 | -6.7 | putative ligase (VIMSS) | compare |
| b1882 | cheY | -2.5 | -1.5 | chemotaxis regulator transmitting signal to flagellar motor component (NCBI) | compare |
| b4202 | rpsR | -2.5 | -2.3 | 30S ribosomal protein S18 (NCBI) | compare |
| b0737 | tolQ | -2.4 | -4.2 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b3979 | thrT | -2.4 | -1.0 | tRNA-Thr (NCBI) | compare |
| b0740 | tolB | -2.4 | -7.1 | translocation protein TolB precursor (NCBI) | compare |
| b3021 | ygiT | -2.4 | -3.7 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b0149 | mrcB | -2.2 | -15.0 | penicillin-binding protein 1b (NCBI) | compare |
| b1192 | ldcA | -2.2 | -5.9 | L,D-carboxypeptidase A (NCBI) | compare |
| b3162 | deaD | -2.0 | -7.3 | inducible ATP-independent RNA helicase (VIMSS) | compare |
| b0683 | fur | -2.0 | -2.7 | ferric uptake regulator (NCBI) | compare |
| b2808 | gcvA | -2.0 | -6.6 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b3613 | yibP | -2.0 | -6.0 | putative membrane protein (VIMSS) | compare |
| b0738 | tolR | -1.9 | -4.4 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b3261 | fis | -1.9 | -2.8 | DNA-binding protein Fis (NCBI) | compare |
| b0200 | gmhB | -1.8 | -1.7 | hypothetical protein (NCBI) | compare |
| b3026 | qseC | -1.8 | -6.0 | sensory histidine kinase in two-component regulatory system with QseB (NCBI) | compare |
| b4042 | dgkA | -1.7 | -3.2 | diacylglycerol kinase (NCBI) | compare |
| b4375 | prfC | -1.7 | -6.7 | peptide chain release factor 3 (NCBI) | compare |
| b2567 | rnc | -1.6 | -1.1 | ribonuclease III (NCBI) | compare |
| b4593 | ymgI | -1.6 | -1.9 | hypothetical protein (RefSeq) | compare |
| b4146 | yjeK | -1.6 | -3.4 | predicted lysine aminomutase (NCBI) | compare |
| b0630 | lipB | -1.5 | -1.7 | protein of lipoate biosynthesis (VIMSS) | compare |
| b3169 | nusA | -1.5 | -4.2 | transcription elongation factor NusA (NCBI) | compare |
| b2281 | nuoI | -1.5 | -3.5 | NADH dehydrogenase subunit I (NCBI) | compare |
| b0739 | tolA | -1.4 | -4.0 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b1861 | ruvA | -1.4 | -2.0 | Holliday junction DNA helicase motor protein (NCBI) | compare |
| b3621 | rfaC | -1.4 | -6.3 | ADP-heptose:LPS heptosyl transferase I (NCBI) | compare |
| b2330 | yfcB | -1.4 | -2.3 | putative adenine-specific methylase (VIMSS) | compare |
| b0890 | ftsK | -1.4 | -5.3 | DNA-binding membrane protein required for chromosome resolution and partitioning (NCBI) | compare |
| b3052 | rfaE | -1.4 | -6.3 | fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI) | compare |
| b3290 | trkA | -1.4 | -2.7 | potassium transporter peripheral membrane component (NCBI) | compare |
| b0726 | sucA | -1.4 | -4.5 | alpha-ketoglutarate decarboxylase (NCBI) | compare |
| b0741 | pal | -1.4 | -2.8 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b0386 | proC | -1.4 | -5.0 | pyrroline-5-carboxylate reductase (NCBI) | compare |
| b3977 | tyrU | -1.3 | -1.4 | tRNA-Tyr (NCBI) | compare |
| b3619 | rfaD | -1.3 | -4.8 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) | compare |
| b1545 | pinQ | -1.3 | -0.5 | Qin prophage; predicted site-specific recombinase (NCBI) | compare |
| b3940 | metL | -1.3 | -7.1 | bifunctional aspartate kinase II/homoserine dehydrogenase II (NCBI) | compare |
| b2699 | recA | -1.3 | -1.5 | recombinase A (NCBI) | compare |
| b1105 | ycfM | -1.3 | -4.6 | predicted outer membrane lipoprotein (NCBI) | compare |
| b4402 | yjjY | -1.3 | -1.5 | hypothetical protein (NCBI) | compare |
| b3741 | gidA | -1.3 | -5.2 | glucose-inhibited division protein A (NCBI) | compare |
| b0688 | pgm | -1.3 | -3.7 | phosphoglucomutase (NCBI) | compare |
| b1863 | ruvC | -1.3 | -2.7 | Holliday junction resolvase (NCBI) | compare |
| b0222 | lpcA | -1.3 | -2.9 | phosphoheptose isomerase (NCBI) | compare |
| b4155 | yjeA | -1.2 | -0.8 | putative lysyl-tRNA synthetase (VIMSS) | compare |
| b1860 | ruvB | -1.2 | -1.1 | Holliday junction DNA helicase B (NCBI) | compare |
| b1236 | galU | -1.2 | -4.3 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b3390 | aroK | -1.1 | -2.5 | shikimate kinase I (NCBI) | compare |
| b0049 | apaH | -1.1 | -3.2 | diadenosinetetraphosphatase (NCBI) | compare |
| b2853 | ygeI | -1.1 | -0.7 | hypothetical protein (NCBI) | compare |
| b3839 | tatC | -1.1 | -5.6 | TatABCE protein translocation system subunit (NCBI) | compare |
| b2935 | tktA | -1.1 | -1.8 | transketolase 1, thiamin-binding (NCBI) | compare |
| b2279 | nuoK | -1.1 | -2.3 | NADH dehydrogenase subunit K (NCBI) | compare |
| b3035 | tolC | -1.1 | -6.6 | outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) | compare |
| b3811 | xerC | -1.1 | -1.2 | site-specific tyrosine recombinase XerC (NCBI) | compare |
| b3658 | selC | -1.0 | -3.4 | tRNA-Sec (NCBI) | compare |
| b3636 | rpmG | -1.0 | -2.6 | 50S ribosomal protein L33 (NCBI) | compare |
| b2569 | lepA | -1.0 | -4.3 | GTP-binding protein LepA (NCBI) | compare |
| b4177 | purA | -1.0 | -1.3 | adenylosuccinate synthetase (NCBI) | compare |
| b0949 | uup | -1.0 | -6.0 | fused predicted transporter subunits of ABC superfamily: ATP-binding components (NCBI) | compare |
| b1292 | sapC | -1.0 | -2.3 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b4179 | vacB | -1.0 | -5.4 | putative enzyme (VIMSS) | compare |
| b3387 | dam | -1.0 | -7.3 | DNA adenine methylase (NCBI) | compare |
| b2282 | nuoH | -1.0 | -3.1 | NADH dehydrogenase subunit H (NCBI) | compare |
| b0437 | clpP | -0.9 | -4.7 | ATP-dependent Clp protease proteolytic subunit (NCBI) | compare |
| b2318 | truA | -0.9 | -2.4 | tRNA pseudouridine synthase A (NCBI) | compare |
| b3778 | rep | -0.9 | -5.4 | DNA helicase and single-stranded DNA-dependent ATPase (NCBI) | compare |
| b3792 | wzxE | -0.9 | -5.2 | O-antigen translocase (NCBI) | compare |
| b2498 | upp | -0.9 | -2.9 | uracil phosphoribosyltransferase (VIMSS) | compare |
| b2421 | cysM | -0.9 | -4.2 | cysteine synthase B (O-acetylserine sulfhydrolase B) (NCBI) | compare |
| b1182 | hlyE | -0.9 | -0.6 | hemolysin E (VIMSS) | compare |
| b4414 | tff | -0.9 | -1.9 | unknown RNA (NCBI) | compare |
| b2894 | xerD | -0.9 | -1.1 | site-specific tyrosine recombinase XerD (NCBI) | compare |
| b4171 | miaA | -0.9 | -2.5 | tRNA delta(2)-isopentenylpyrophosphate transferase (NCBI) | compare |
| b1290 | sapF | -0.9 | -1.6 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b0471 | ybaB | -0.9 | -2.0 | hypothetical protein (NCBI) | compare |
| b3631 | rfaG | -0.8 | -7.1 | glucosyltransferase I (NCBI) | compare |
| b2414 | cysK | -0.8 | -5.6 | cysteine synthase A, O-acetylserine sulfhydrolase A subunit (NCBI) | compare |
| b0888 | trxB | -0.8 | -2.7 | thioredoxin reductase, FAD/NAD(P)-binding (NCBI) | compare |
| b0889 | lrp | -0.8 | -2.7 | DNA-binding transcriptional dual regulator, leucine-binding (NCBI) | compare |
| b3916 | pfkA | -0.8 | -2.4 | 6-phosphofructokinase (NCBI) | compare |
| b1258 | yciF | -0.8 | -1.1 | hypothetical protein (NCBI) | compare |
| b3237 | argR | -0.8 | -3.6 | arginine repressor (NCBI) | compare |
| b2822 | recC | -0.8 | -3.8 | exonuclease V (RecBCD complex), gamma chain (NCBI) | compare |
| b1293 | sapB | -0.8 | -1.1 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b3500 | gor | -0.8 | -1.0 | glutathione reductase (NCBI) | compare |
| b2110 | yehC | -0.8 | -1.0 | predicted periplasmic pilin chaperone (NCBI) | compare |
| b3870 | glnA | -0.8 | -2.6 | glutamine synthetase (NCBI) | compare |
| b3075 | ebgR | -0.8 | -4.3 | DNA-binding transcriptional repressor (NCBI) | compare |
| b1257 | yciE | -0.8 | -0.4 | hypothetical protein (NCBI) | compare |
| b3620 | rfaF | -0.8 | -4.0 | ADP-heptose:LPS heptosyltransferase II (NCBI) | compare |
| b3205 | yhbJ | -0.8 | -3.7 | hypothetical protein (NCBI) | compare |
| b4435 | isrC | -0.8 | -2.1 | unknown RNA (NCBI) | compare |
| b1850 | eda | -0.8 | -2.0 | keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase (NCBI) | compare |
| b3183 | obgE | -0.8 | -1.2 | GTPase involved in cell partioning and DNA repair (NCBI) | compare |
| b4172 | hfq | -0.8 | -0.8 | RNA-binding protein Hfq (NCBI) | compare |
| b1363 | trkG | -0.8 | -0.5 | Rac prophage; potassium transporter subunit (NCBI) | compare |
| b2168 | fruK | -0.8 | -1.3 | 1-phosphofructokinase (NCBI) | compare |
| b1259 | yciG | -0.8 | -1.9 | orf, hypothetical protein (VIMSS) | compare |
| b1679 | sufE | -0.8 | -3.6 | cysteine desufuration protein SufE (NCBI) | compare |
| b1630 | rsxD | -0.7 | -4.4 | electron transport complex protein RnfD (NCBI) | compare |
| b0113 | pdhR | -0.7 | -4.3 | transcriptional regulator of pyruvate dehydrogenase complex (NCBI) | compare |
| b1628 | rsxB | -0.7 | -2.4 | electron transport complex protein RnfB (NCBI) | compare |
| b1130 | phoP | -0.7 | -1.1 | DNA-binding response regulator in two-component regulatory system with PhoQ (NCBI) | compare |
| b3842 | rfaH | -0.7 | -3.8 | transcriptional activator RfaH (NCBI) | compare |
| b3463 | ftsE | -0.7 | -0.5 | predicted transporter subunit: ATP-binding component of ABC superfamily (NCBI) | compare |
| b1497 | b1497 | -0.7 | -0.4 | putative enzyme (VIMSS) | compare |
| b0658 | ybeX | -0.7 | -0.7 | predicteed ion transport (NCBI) | compare |
| b1773 | ydjI | -0.7 | -1.7 | predicted aldolase (NCBI) | compare |
| b4594 | ymgJ | -0.7 | -2.0 | hypothetical protein (RefSeq) | compare |
| b0724 | sdhB | -0.7 | -4.3 | succinate dehydrogenase, FeS subunit (NCBI) | compare |
| b3728 | pstS | -0.7 | -2.1 | phosphate transporter subunit (NCBI) | compare |
| b3935 | priA | -0.7 | -1.4 | primosome assembly protein PriA (NCBI) | compare |
| b3871 | bipA | -0.7 | -5.3 | GTP-binding protein (NCBI) | compare |
| b1823 | cspC | -0.7 | -1.5 | stress protein, member of the CspA-family (NCBI) | compare |
| b2501 | ppk | -0.7 | -4.7 | polyphosphate kinase (NCBI) | compare |
| b4453 | ldrD | -0.7 | -1.6 | toxic polypeptide, small (NCBI) | compare |
| b2553 | glnB | -0.7 | -3.8 | regulatory protein P-II for glutamine synthetase (NCBI) | compare |
| b0729 | sucD | -0.7 | -2.0 | succinyl-CoA synthetase subunit alpha (NCBI) | compare |
| b1551 | b1551 | -0.7 | -0.3 | orf, hypothetical protein (VIMSS) | compare |
| b0364 | yaiS | -0.7 | -2.6 | orf, hypothetical protein (VIMSS) | compare |
| b3867 | hemN | -0.7 | -5.2 | O2-independent coproporphyrinogen III oxidase (VIMSS) | compare |
| b1576 | ydfD | -0.7 | -0.3 | Qin prophage; predicted protein (NCBI) | compare |
| b4232 | fbp | -0.7 | -5.3 | fructose-1,6-bisphosphatase (NCBI) | compare |
| b4373 | rimI | -0.7 | -1.6 | ribosomal-protein-alanine N-acetyltransferase (NCBI) | compare |
| b4416 | rybA | -0.7 | -1.2 | unknown RNA (NCBI) | compare |
| b3761 | trpT | -0.7 | -1.4 | tRNA-Trp (NCBI) | compare |
| b2284 | nuoF | -0.6 | -2.9 | NADH:ubiquinone oxidoreductase, chain F (NCBI) | compare |
| b2448 | yffQ | -0.6 | -2.2 | CPZ-55 prophage; predicted protein (RefSeq) | compare |
| b3609 | secB | -0.6 | -3.2 | export protein SecB (NCBI) | compare |
| b3630 | rfaP | -0.6 | -4.6 | kinase that phosphorylates core heptose of lipopolysaccharide (NCBI) | compare |
| b0735 | ybgE | -0.6 | -2.5 | conserved inner membrane protein (NCBI) | compare |
| b3726 | pstA | -0.6 | -2.5 | phosphate transporter subunit (NCBI) | compare |
| b0004 | thrC | -0.6 | -4.2 | threonine synthase (NCBI) | compare |
| b2283 | nuoG | -0.6 | -3.9 | NADH:ubiquinone oxidoreductase, chain G (RefSeq) | compare |
| b0605 | ahpC | -0.6 | -2.7 | alkyl hydroperoxide reductase, C22 subunit (NCBI) | compare |
| b1499 | ydeO | -0.6 | -0.3 | predicted DNA-binding transcriptional acfivator (NCBI) | compare |
| b0088 | murD | -0.6 | -1.6 | UDP-N-acetylmuramoyl-L-alanyl-D-glutamatesynthetase (NCBI) | compare |
| b2625 | yfjI | -0.6 | -1.0 | CP4-57 prophage; predicted protein (NCBI) | compare |
| b1712 | ihfA | -0.6 | -1.0 | integration host factor subunit alpha (NCBI) | compare |
| b3781 | trxA | -0.6 | -2.9 | thioredoxin 1 (VIMSS) | compare |
| b3210 | arcB | -0.6 | -4.3 | hybrid sensory histidine kinase in two-component regulatory system with ArcA (NCBI) | compare |
| b4450 | arcZ | -0.6 | -2.1 | sRNA antisense regulator of tpx and sdaA, Hfq-dependent (RefSeq) | compare |
| b4203 | rplI | -0.6 | -3.1 | 50S ribosomal protein L9 (NCBI) | compare |
| b2340 | sixA | -0.6 | -2.6 | phosphohistidine phosphatase (NCBI) | compare |
| b1347 | ydaC | -0.6 | -0.3 | Rac prophage; predicted protein (NCBI) | compare |
| b4655 | ythA | -0.6 | -1.0 | expressed protein (RefSeq) | compare |
| b0440 | hupB | -0.6 | -2.9 | HU, DNA-binding transcriptional regulator, beta subunit (NCBI) | compare |
| b0881 | clpS | -0.6 | -1.5 | ATP-dependent Clp protease adaptor protein ClpS (NCBI) | compare |
| b3790 | rffC | -0.6 | -3.6 | TDP-fucosamine acetyltransferase (RefSeq) | compare |
| b1818 | manY | -0.6 | -1.6 | mannose-specific enzyme IIC component of PTS (NCBI) | compare |
| b2620 | smpB | -0.6 | -0.9 | SsrA-binding protein (NCBI) | compare |
| b1103 | ycfF | -0.6 | -1.3 | orf, hypothetical protein (VIMSS) | compare |
| b1176 | minC | -0.6 | -1.8 | septum formation inhibitor (NCBI) | compare |
| b2278 | nuoL | -0.6 | -4.2 | NADH dehydrogenase subunit L (NCBI) | compare |
| b4589 | ylcI | -0.6 | -2.2 | hypothetical protein (RefSeq) | compare |
| b4676 | yoaK | -0.6 | -0.5 | expressed protein (RefSeq) | compare |
| b1536 | ydeI | -0.6 | -0.8 | hypothetical protein (NCBI) | compare |
| b1593 | b1593 | -0.6 | -2.5 | orf, hypothetical protein (VIMSS) | compare |
| b0721 | sdhC | -0.6 | -3.2 | succinate dehydrogenase cytochrome b556 large membrane subunit (NCBI) | compare |
| b1162 | ycgE | -0.6 | -3.2 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b3838 | tatB | -0.6 | -3.7 | sec-independent translocase (NCBI) | compare |
| b1868 | yecE | -0.6 | -1.8 | hypothetical protein (NCBI) | compare |
| b3706 | trmE | -0.6 | -2.8 | tRNA modification GTPase (NCBI) | compare |
| b1480 | sra | -0.6 | -1.2 | 30S ribosomal subunit protein S22 (NCBI) | compare |
| b3794 | rffM | -0.6 | -3.5 | putative UDP-N-acetyl-D-mannosaminuronic acid transferase (NCBI) | compare |
| b3389 | aroB | -0.6 | -4.3 | 3-dehydroquinate synthase (NCBI) | compare |
| b2286 | nuoC | -0.6 | -2.8 | NADH:ubiquinone oxidoreductase, chain C,D (RefSeq) | compare |
| b2055 | wcaE | -0.6 | -0.3 | predicted glycosyl transferase (NCBI) | compare |
| b4317 | fimD | -0.6 | -5.3 | outer membrane usher protein, type 1 fimbrial synthesis (NCBI) | compare |
| b4503 | yafF | -0.6 | -0.5 | no description | compare |
| b3791 | rffA | -0.6 | -4.0 | TDP-4-oxo-6-deoxy-D-glucose transaminase (NCBI) | compare |
| b2433 | b2433 | -0.6 | -1.9 | orf, hypothetical protein (VIMSS) | compare |
| b0928 | aspC | -0.6 | -3.2 | aspartate aminotransferase, PLP-dependent (NCBI) | compare |
| b4418 | sraB | -0.6 | -1.1 | unknown RNA (NCBI) | compare |
| b1505 | ydeT | -0.6 | -0.8 | hypothetical protein (RefSeq) | compare |
| b3033 | yqiB | -0.5 | -3.0 | predicted dehydrogenase (NCBI) | compare |
| b4314 | fimA | -0.5 | -4.0 | major type 1 subunit fimbrin (pilin) (NCBI) | compare |
| b0469 | apt | -0.5 | -3.7 | adenine phosphoribosyltransferase (NCBI) | compare |
| b4590 | ybfK | -0.5 | -0.7 | hypothetical protein (RefSeq) | compare |
| b2277 | nuoM | -0.5 | -2.9 | NADH dehydrogenase subunit M (NCBI) | compare |
| b2419 | yfeK | -0.5 | -1.6 | hypothetical protein (NCBI) | compare |
| b4481 | rffT | -0.5 | -3.4 | 4-alpha-L-fucosyltransferase (NCBI) | compare |
| b1167 | ymgC | -0.5 | -0.3 | hypothetical protein (NCBI) | compare |
| b1346 | ydaQ | -0.5 | -0.9 | orf, hypothetical protein (VIMSS) | compare |
| b3649 | rpoZ | -0.5 | -2.3 | DNA-directed RNA polymerase subunit omega (NCBI) | compare |
| b4588 | ylcH | -0.5 | -2.3 | hypothetical protein, DLP12 prophage (RefSeq) | compare |
| b1351 | racC | -0.5 | -0.5 | Rac prophage; predicted protein (NCBI) | compare |
| b1839 | yebY | -0.5 | -1.7 | hypothetical protein (NCBI) | compare |
| b3787 | rffD | -0.5 | -4.1 | UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase (NCBI) | compare |
| b3180 | yhbY | -0.5 | -2.8 | predicted RNA-binding protein (NCBI) | compare |
| b0187 | yaeR | -0.5 | -2.9 | orf, hypothetical protein (VIMSS) | compare |
| b1518 | lsrG | -0.5 | -1.4 | autoinducer-2 (AI-2) modifying protein LsrG (NCBI) | compare |
| b1129 | phoQ | -0.5 | -1.1 | sensory histidine kinase in two-compoent regulatory system with PhoP (NCBI) | compare |
| b4497 | yeeL | -0.5 | -0.9 | no description | compare |
| b2763 | cysI | -0.5 | -3.1 | sulfite reductase, beta subunit, NAD(P)-binding, heme-binding (NCBI) | compare |
| b0723 | sdhA | -0.5 | -3.9 | succinate dehydrogenase flavoprotein subunit (NCBI) | compare |