Experiment set16IT011 for Pseudomonas putida KT2440

Compare to:

3-methyl-1-butanol carbon source

Genes with specific phenotypes:

  gene name fitness t score description  
PP_4065 -6.3 -11.4 methylcrotonyl-CoA carboxylase biotin-containing subunit beta compare
PP_4064 -5.0 -13.6 isovaleryl-CoA dehydrogenase compare
PP_3123 -4.7 -12.7 acetoacetyl CoA-transferase (subunit B) compare
PP_3122 -4.0 -6.1 acetoacetyl CoA-transferase (subunit A) compare
PP_1009 -2.8 -6.6 glyceraldehyde-3-phosphate dehydrogenase compare
PP_5161 -2.5 -6.4 putative lysophospholipase compare
PP_4549 -2.4 -10.6 long-chain-fatty-acid/CoA ligase compare
PP_1616 -2.3 -9.5 formaldehyde dehydrogenase, glutathione-dependent compare
PP_0927 -2.2 -13.5 aromatic amino acid transport protein compare
PP_4811 -2.2 -5.0 Gamma-glutamyl phosphate reductase compare
PP_4063 -2.1 -8.9 putative Long-chain-fatty-acid-CoA ligase compare
PP_3455 -1.9 -8.1 Multidrug efflux RND membrane fusion protein compare
PP_1027 -1.9 -7.4 Exodeoxyribonuclease 7 large subunit compare
PP_4831 -1.8 -5.9 putative cobalt-precorrin-6A synthase compare
PP_4774 -1.6 -8.0 divalent cation efflux transporter compare
PP_0795 -1.6 -8.6 fructose PTS permease - IIBC component compare
PP_3456 -1.4 -8.9 Multidrug resistance protein MexB compare
PP_1092 -1.4 -7.0 DNA glycosylase/apyrimidinic (AP) lyase specific for damaged pyrimidinic sites compare
PP_0878 -1.4 -6.5 dipeptide ABC transporter, binding subunit compare
PP_1007 -1.4 -6.9 putative Transmembrane sensor compare
PP_4613 -1.4 -8.4 outer membrane ferric citrate porin compare
PP_4611 -1.3 -5.4 RNA polymerase sigma-70 factor, ECF subfamily compare
PP_4975 -1.2 -6.2 Long-chain acyl-CoA thioester hydrolase family protein compare
PP_1617 -1.2 -5.2 S-formylglutathione hydrolase / S-lactoylglutathione hydrolase compare
PP_1984 -1.1 -6.7 Transcriptional regulator, LysR family compare
PP_0012 -1.0 -6.7 DNA replication and repair protein compare
PP_5196 +1.1 8.4 putative iron(III)|iron ABC transporter, periplasmic iron-binding protein compare
PP_0482 +1.2 8.5 bacterioferritin compare
PP_5314 +1.2 10.7 Rubredoxin-NAD(+) reductase compare
PP_1078 +1.4 10.5 putative ABC transporter, ATP-binding protein compare
PP_4779 +1.4 13.0 AMP nucleosidase compare
PP_1082 +1.7 11.7 bacterioferritin compare
PP_4690 +1.7 7.3 Rieske 2Fe-2S family protein compare
PP_4628 +1.9 12.6 conserved protein of unknown function compare


Specific phenotypes for carbon source 3-methyl-1-butanol across organisms