| | gene | name | fitness | t score | description | |
|---|
| b1192 | ldcA | -3.5 | -10.8 | L,D-carboxypeptidase A (NCBI) | compare |
| b3979 | thrT | -2.4 | -1.0 | tRNA-Thr (NCBI) | compare |
| b2642 | yfjW | -2.4 | -2.2 | CP4-57 prophage; predicted inner membrane protein (NCBI) | compare |
| b3613 | yibP | -2.1 | -6.7 | putative membrane protein (VIMSS) | compare |
| b1286 | rnb | -2.0 | -4.1 | exoribonuclease II (NCBI) | compare |
| b0149 | mrcB | -2.0 | -13.4 | penicillin-binding protein 1b (NCBI) | compare |
| b1882 | cheY | -1.9 | -1.3 | chemotaxis regulator transmitting signal to flagellar motor component (NCBI) | compare |
| b3021 | ygiT | -1.8 | -4.4 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b4042 | dgkA | -1.8 | -3.4 | diacylglycerol kinase (NCBI) | compare |
| b2830 | nudH | -1.7 | -2.0 | dinucleoside polyphosphate hydrolase (NCBI) | compare |
| b2699 | recA | -1.7 | -1.6 | recombinase A (NCBI) | compare |
| b2318 | truA | -1.6 | -3.2 | tRNA pseudouridine synthase A (NCBI) | compare |
| b4414 | tff | -1.6 | -4.1 | unknown RNA (NCBI) | compare |
| b1290 | sapF | -1.6 | -2.1 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b1863 | ruvC | -1.5 | -3.1 | Holliday junction resolvase (NCBI) | compare |
| b1861 | ruvA | -1.5 | -2.1 | Holliday junction DNA helicase motor protein (NCBI) | compare |
| b0049 | apaH | -1.5 | -4.0 | diadenosinetetraphosphatase (NCBI) | compare |
| b4146 | yjeK | -1.5 | -3.5 | predicted lysine aminomutase (NCBI) | compare |
| b0740 | tolB | -1.5 | -5.7 | translocation protein TolB precursor (NCBI) | compare |
| b3778 | rep | -1.5 | -8.2 | DNA helicase and single-stranded DNA-dependent ATPase (NCBI) | compare |
| b3863 | polA | -1.5 | -1.9 | DNA polymerase I (NCBI) | compare |
| b2528 | iscA | -1.5 | -1.9 | iron-sulfur cluster assembly protein (NCBI) | compare |
| b3940 | metL | -1.5 | -7.0 | bifunctional aspartate kinase II/homoserine dehydrogenase II (NCBI) | compare |
| b2498 | upp | -1.4 | -3.7 | uracil phosphoribosyltransferase (VIMSS) | compare |
| b1105 | ycfM | -1.4 | -4.1 | predicted outer membrane lipoprotein (NCBI) | compare |
| b4171 | miaA | -1.4 | -4.9 | tRNA delta(2)-isopentenylpyrophosphate transferase (NCBI) | compare |
| b1545 | pinQ | -1.4 | -0.5 | Qin prophage; predicted site-specific recombinase (NCBI) | compare |
| b2912 | ygfA | -1.4 | -3.4 | putative ligase (VIMSS) | compare |
| b2904 | gcvH | -1.3 | -2.8 | glycine cleavage system protein H (NCBI) | compare |
| b0890 | ftsK | -1.3 | -5.1 | DNA-binding membrane protein required for chromosome resolution and partitioning (NCBI) | compare |
| b3390 | aroK | -1.3 | -2.8 | shikimate kinase I (NCBI) | compare |
| b3620 | rfaF | -1.3 | -5.2 | ADP-heptose:LPS heptosyltransferase II (NCBI) | compare |
| b1160 | elbA | -1.3 | -1.4 | hypothetical protein (NCBI) | compare |
| b2567 | rnc | -1.3 | -1.2 | ribonuclease III (NCBI) | compare |
| b2935 | tktA | -1.3 | -2.2 | transketolase 1, thiamin-binding (NCBI) | compare |
| b3169 | nusA | -1.3 | -3.2 | transcription elongation factor NusA (NCBI) | compare |
| b2330 | yfcB | -1.3 | -2.3 | putative adenine-specific methylase (VIMSS) | compare |
| b1292 | sapC | -1.2 | -2.1 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b1860 | ruvB | -1.2 | -1.1 | Holliday junction DNA helicase B (NCBI) | compare |
| b4375 | prfC | -1.2 | -5.6 | peptide chain release factor 3 (NCBI) | compare |
| b0200 | gmhB | -1.2 | -1.5 | hypothetical protein (NCBI) | compare |
| b4593 | ymgI | -1.2 | -1.6 | hypothetical protein (RefSeq) | compare |
| b2853 | ygeI | -1.2 | -0.7 | hypothetical protein (NCBI) | compare |
| b2820 | recB | -1.2 | -0.8 | exonuclease V (RecBCD complex), beta subunit (NCBI) | compare |
| b3839 | tatC | -1.2 | -6.0 | TatABCE protein translocation system subunit (NCBI) | compare |
| b3290 | trkA | -1.2 | -2.8 | potassium transporter peripheral membrane component (NCBI) | compare |
| b3977 | tyrU | -1.1 | -1.2 | tRNA-Tyr (NCBI) | compare |
| b0738 | tolR | -1.1 | -3.0 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b0949 | uup | -1.1 | -7.3 | fused predicted transporter subunits of ABC superfamily: ATP-binding components (NCBI) | compare |
| b4201 | priB | -1.1 | -2.7 | primosomal replication protein N (NCBI) | compare |
| b0683 | fur | -1.1 | -1.2 | ferric uptake regulator (NCBI) | compare |
| b0741 | pal | -1.1 | -3.7 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b2576 | srmB | -1.1 | -3.8 | ATP-dependent RNA helicase (NCBI) | compare |
| b4685 | yrbN | -1.1 | -3.0 | expressed protein (RefSeq) | compare |
| b3741 | gidA | -1.1 | -4.8 | glucose-inhibited division protein A (NCBI) | compare |
| b2620 | smpB | -1.0 | -1.4 | SsrA-binding protein (NCBI) | compare |
| b3500 | gor | -1.0 | -1.9 | glutathione reductase (NCBI) | compare |
| b0730 | mngR | -1.0 | -1.9 | DNA-binding transcriptional dual regulator, fatty-acyl-binding (NCBI) | compare |
| b3387 | dam | -1.0 | -7.6 | DNA adenine methylase (NCBI) | compare |
| b3619 | rfaD | -1.0 | -3.3 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) | compare |
| b3026 | qseC | -1.0 | -4.1 | sensory histidine kinase in two-component regulatory system with QseB (NCBI) | compare |
| b1524 | yneH | -1.0 | -1.0 | predicted glutaminase (NCBI) | compare |
| b3706 | trmE | -0.9 | -4.4 | tRNA modification GTPase (NCBI) | compare |
| b2518 | ndk | -0.9 | -2.9 | nucleoside diphosphate kinase (NCBI) | compare |
| b3792 | wzxE | -0.9 | -5.4 | O-antigen translocase (NCBI) | compare |
| b2947 | gshB | -0.9 | -4.2 | glutathione synthetase (NCBI) | compare |
| b1724 | ydiZ | -0.9 | -2.3 | hypothetical protein (NCBI) | compare |
| b0222 | lpcA | -0.9 | -2.5 | phosphoheptose isomerase (NCBI) | compare |
| b4155 | yjeA | -0.9 | -0.9 | putative lysyl-tRNA synthetase (VIMSS) | compare |
| b2343 | b2343 | -0.9 | -1.6 | orf, hypothetical protein (VIMSS) | compare |
| b1679 | sufE | -0.8 | -2.9 | cysteine desufuration protein SufE (NCBI) | compare |
| b3870 | glnA | -0.8 | -3.1 | glutamine synthetase (NCBI) | compare |
| b4481 | rffT | -0.8 | -5.1 | 4-alpha-L-fucosyltransferase (NCBI) | compare |
| b3162 | deaD | -0.8 | -4.1 | inducible ATP-independent RNA helicase (VIMSS) | compare |
| b0658 | ybeX | -0.8 | -0.6 | predicteed ion transport (NCBI) | compare |
| b2808 | gcvA | -0.8 | -3.5 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b3916 | pfkA | -0.8 | -2.2 | 6-phosphofructokinase (NCBI) | compare |
| b3791 | rffA | -0.8 | -5.2 | TDP-4-oxo-6-deoxy-D-glucose transaminase (NCBI) | compare |
| b4163 | glyV | -0.8 | -1.9 | tRNA-Gly (NCBI) | compare |
| b1877 | yecT | -0.8 | -2.2 | orf, hypothetical protein (VIMSS) | compare |
| b1361 | ydaW | -0.8 | -0.5 | orf, hypothetical protein (VIMSS) | compare |
| b1497 | b1497 | -0.8 | -0.4 | putative enzyme (VIMSS) | compare |
| b1165 | ymgA | -0.8 | -0.5 | hypothetical protein (NCBI) | compare |
| b1257 | yciE | -0.8 | -0.4 | hypothetical protein (NCBI) | compare |
| b2569 | lepA | -0.8 | -3.1 | GTP-binding protein LepA (NCBI) | compare |
| b3726 | pstA | -0.8 | -4.1 | phosphate transporter subunit (NCBI) | compare |
| b3636 | rpmG | -0.8 | -1.6 | 50S ribosomal protein L33 (NCBI) | compare |
| b4603 | rseX | -0.8 | -0.6 | sRNA regulating ompA and ompC translation, with Hfq (RefSeq) | compare |
| b0113 | pdhR | -0.8 | -4.1 | transcriptional regulator of pyruvate dehydrogenase complex (NCBI) | compare |
| b1164 | ycgZ | -0.8 | -1.5 | hypothetical protein (NCBI) | compare |
| b1628 | rsxB | -0.8 | -3.1 | electron transport complex protein RnfB (NCBI) | compare |
| b3405 | ompR | -0.8 | -3.2 | osmolarity response regulator (NCBI) | compare |
| b2822 | recC | -0.8 | -3.6 | exonuclease V (RecBCD complex), gamma chain (NCBI) | compare |
| b0928 | aspC | -0.7 | -5.3 | aspartate aminotransferase, PLP-dependent (NCBI) | compare |
| b3463 | ftsE | -0.7 | -0.5 | predicted transporter subunit: ATP-binding component of ABC superfamily (NCBI) | compare |
| b1550 | b1550 | -0.7 | -1.1 | orf, hypothetical protein (VIMSS) | compare |
| b4048 | yjbM | -0.7 | -1.4 | hypothetical protein (NCBI) | compare |
| b2501 | ppk | -0.7 | -4.7 | polyphosphate kinase (NCBI) | compare |
| b1103 | ycfF | -0.7 | -1.0 | orf, hypothetical protein (VIMSS) | compare |
| b2597 | yfiA | -0.7 | -1.7 | cold shock protein associated with 30S ribosomal subunit (NCBI) | compare |
| b0739 | tolA | -0.7 | -2.3 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b3237 | argR | -0.7 | -3.9 | arginine repressor (NCBI) | compare |
| b1576 | ydfD | -0.7 | -0.3 | Qin prophage; predicted protein (NCBI) | compare |
| b1129 | phoQ | -0.7 | -1.4 | sensory histidine kinase in two-compoent regulatory system with PhoP (NCBI) | compare |
| b1499 | ydeO | -0.7 | -0.3 | predicted DNA-binding transcriptional acfivator (NCBI) | compare |
| b1551 | b1551 | -0.7 | -0.3 | orf, hypothetical protein (VIMSS) | compare |
| b3414 | gntY | -0.7 | -3.6 | predicted gluconate transport associated protein (NCBI) | compare |
| b2421 | cysM | -0.7 | -3.5 | cysteine synthase B (O-acetylserine sulfhydrolase B) (NCBI) | compare |
| b0617 | citD | -0.7 | -1.9 | citrate lyase, acyl carrier (gamma) subunit (NCBI) | compare |
| b0167 | glnD | -0.7 | -2.9 | PII uridylyl-transferase (NCBI) | compare |
| b0623 | cspE | -0.7 | -1.6 | cold shock protein E (NCBI) | compare |
| b1182 | hlyE | -0.7 | -0.6 | hemolysin E (VIMSS) | compare |
| b3052 | rfaE | -0.7 | -2.7 | fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI) | compare |
| b1125 | potB | -0.7 | -2.3 | spermidine/putrescine ABC transporter membrane protein (NCBI) | compare |
| b2007 | yeeX | -0.7 | -1.7 | conserved protein (RefSeq) | compare |
| b2297 | pta | -0.7 | -0.4 | phosphate acetyltransferase (NCBI) | compare |
| b3631 | rfaG | -0.7 | -5.8 | glucosyltransferase I (NCBI) | compare |
| b1258 | yciF | -0.7 | -1.0 | hypothetical protein (NCBI) | compare |
| b0888 | trxB | -0.7 | -2.6 | thioredoxin reductase, FAD/NAD(P)-binding (NCBI) | compare |
| b0746 | valZ | -0.7 | -1.4 | tRNA-Val (NCBI) | compare |
| b2894 | xerD | -0.7 | -0.9 | site-specific tyrosine recombinase XerD (NCBI) | compare |
| b1001 | yccE | -0.7 | -0.4 | hypothetical protein (NCBI) | compare |
| b0737 | tolQ | -0.7 | -2.0 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b1409 | ynbB | -0.6 | -1.0 | predicted CDP-diglyceride synthase (NCBI) | compare |
| b3261 | fis | -0.6 | -1.6 | DNA-binding protein Fis (NCBI) | compare |
| b0191 | yaeJ | -0.6 | -3.5 | hypothetical protein (NCBI) | compare |
| b1480 | sra | -0.6 | -1.4 | 30S ribosomal subunit protein S22 (NCBI) | compare |
| b1347 | ydaC | -0.6 | -0.3 | Rac prophage; predicted protein (NCBI) | compare |
| b1961 | dcm | -0.6 | -0.7 | DNA cytosine methylase (NCBI) | compare |
| b1778 | yeaA | -0.6 | -2.2 | methionine sulfoxide reductase B (NCBI) | compare |
| b4232 | fbp | -0.6 | -5.2 | fructose-1,6-bisphosphatase (NCBI) | compare |
| b1865 | nudB | -0.6 | -1.1 | dATP pyrophosphohydrolase (NCBI) | compare |
| b0785 | moaE | -0.6 | -2.8 | molybdopterin synthase, large subunit (NCBI) | compare |
| b2897 | ygfY | -0.6 | -2.3 | hypothetical protein (NCBI) | compare |
| b4497 | yeeL | -0.6 | -1.0 | no description | compare |
| b1291 | sapD | -0.6 | -0.9 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b3389 | aroB | -0.6 | -4.3 | 3-dehydroquinate synthase (NCBI) | compare |
| b0015 | dnaJ | -0.6 | -4.5 | chaperone Hsp40, co-chaperone with DnaK (NCBI) | compare |
| b0161 | degP | -0.6 | -3.8 | serine endoprotease (protease Do), membrane-associated (NCBI) | compare |
| b2448 | yffQ | -0.6 | -2.5 | CPZ-55 prophage; predicted protein (RefSeq) | compare |
| b3621 | rfaC | -0.6 | -3.2 | ADP-heptose:LPS heptosyl transferase I (NCBI) | compare |
| b0729 | sucD | -0.6 | -1.7 | succinyl-CoA synthetase subunit alpha (NCBI) | compare |
| b1502 | ydeQ | -0.6 | -1.5 | predicted fimbrial-like adhesin protein (NCBI) | compare |
| b3935 | priA | -0.6 | -1.9 | primosome assembly protein PriA (NCBI) | compare |
| b3786 | rffE | -0.6 | -4.9 | UDP-N-acetyl glucosamine-2-epimerase (NCBI) | compare |
| b2055 | wcaE | -0.6 | -0.3 | predicted glycosyl transferase (NCBI) | compare |
| b4402 | yjjY | -0.6 | -1.0 | hypothetical protein (NCBI) | compare |
| b1171 | b1171 | -0.6 | -1.8 | orf, hypothetical protein (VIMSS) | compare |
| b0676 | nagC | -0.6 | -3.6 | DNA-binding transcriptional dual regulator, repressor of N-acetylglucosamine (NCBI) | compare |
| b0688 | pgm | -0.6 | -2.0 | phosphoglucomutase (NCBI) | compare |
| b4493 | gapC | -0.6 | -1.5 | no description | compare |
| b0889 | lrp | -0.6 | -2.0 | DNA-binding transcriptional dual regulator, leucine-binding (NCBI) | compare |
| b1236 | galU | -0.6 | -2.4 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b1138 | ymfE | -0.6 | -1.0 | e14 prophage; predicted inner membrane protein (NCBI) | compare |
| b0881 | clpS | -0.6 | -1.1 | ATP-dependent Clp protease adaptor protein ClpS (NCBI) | compare |
| b3181 | greA | -0.6 | -2.9 | transcription elongation factor: cleaves 3' nucleotide of paused mRNA (VIMSS) | compare |
| b0437 | clpP | -0.6 | -3.3 | ATP-dependent Clp protease proteolytic subunit (NCBI) | compare |
| b2432 | yfeY | -0.6 | -1.4 | hypothetical protein (NCBI) | compare |
| b1332 | ynaJ | -0.5 | -0.4 | predicted inner membrane protein (NCBI) | compare |
| b3867 | hemN | -0.5 | -4.4 | O2-independent coproporphyrinogen III oxidase (VIMSS) | compare |
| b1630 | rsxD | -0.5 | -3.2 | electron transport complex protein RnfD (NCBI) | compare |
| b1334 | fnr | -0.5 | -1.9 | DNA-binding transcriptional dual regulator, global regulator of anaerobic growth (NCBI) | compare |
| b1074 | flgC | -0.5 | -1.6 | flagellar basal-body rod protein C (NCBI) | compare |
| b3388 | damX | -0.5 | -4.5 | hypothetical protein (NCBI) | compare |
| b2784 | relA | -0.5 | -4.3 | (p)ppGpp synthetase I/GTP pyrophosphokinase (NCBI) | compare |
| b4416 | rybA | -0.5 | -1.0 | unknown RNA (NCBI) | compare |
| b2455 | eutE | -0.5 | -2.9 | predicted aldehyde dehydrogenase, ethanolamine utilization protein (NCBI) | compare |
| b0310 | ykgH | -0.5 | -0.9 | predicted inner membrane protein (NCBI) | compare |
| b0406 | tgt | -0.5 | -2.9 | queuine tRNA-ribosyltransferase (NCBI) | compare |
| b3794 | rffM | -0.5 | -3.7 | putative UDP-N-acetyl-D-mannosaminuronic acid transferase (NCBI) | compare |
| b1951 | rcsA | -0.5 | -0.9 | DNA-binding transcriptional activator, co-regulator with RcsB (NCBI) | compare |
| b0418 | pgpA | -0.5 | -2.9 | phosphatidylglycerophosphatase A (NCBI) | compare |
| b0439 | lon | -0.5 | -2.8 | DNA-binding ATP-dependent protease La (NCBI) | compare |
| b2052 | fcl | -0.5 | -3.5 | bifunctional GDP-fucose synthetase: GDP-4-dehydro-6-deoxy-D-mannose epimerase/ GDP-4-dehydro-6-L-deoxygalactose reductase (NCBI) | compare |
| b3890 | yiiF | -0.5 | -2.3 | orf, hypothetical protein (VIMSS) | compare |
| b3849 | trkH | -0.5 | -4.1 | potassium transporter (NCBI) | compare |
| b4413 | sokC | -0.5 | -1.1 | regulatory antisense RNA (NCBI) | compare |
| b2433 | b2433 | -0.5 | -1.5 | orf, hypothetical protein (VIMSS) | compare |
| b4426 | isrA | -0.5 | -1.3 | unknown RNA (NCBI) | compare |
| b3787 | rffD | -0.5 | -4.0 | UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase (NCBI) | compare |
| b1084 | rne | -0.5 | -2.4 | fused ribonucleaseE: endoribonuclease/RNA-binding protein/RNA degradosome binding protein (NCBI) | compare |
| b2414 | cysK | -0.5 | -3.3 | cysteine synthase A, O-acetylserine sulfhydrolase A subunit (NCBI) | compare |
| b1279 | yciS | -0.5 | -0.8 | conserved inner membrane protein (NCBI) | compare |
| b4179 | vacB | -0.5 | -2.7 | putative enzyme (VIMSS) | compare |
| b0677 | nagA | -0.5 | -2.9 | N-acetylglucosamine-6-phosphate deacetylase (NCBI) | compare |
| b1527 | yneK | -0.5 | -1.3 | hypothetical protein (NCBI) | compare |
| b0504 | ybbS | -0.5 | -2.3 | DNA-binding transcriptional activator of the allD operon (NCBI) | compare |
| b2516 | yfgA | -0.5 | -3.2 | hypothetical protein (NCBI) | compare |
| b2951 | yggS | -0.5 | -2.1 | predicted enzyme (NCBI) | compare |
| b1161 | ycgX | -0.5 | -0.5 | hypothetical protein (NCBI) | compare |
| b3652 | recG | -0.5 | -3.4 | ATP-dependent DNA helicase (NCBI) | compare |
| b4702 | mgtL | -0.5 | -1.0 | regulatory leader peptide for mgtA (NCBI) | compare |
| b3601 | mtlR | -0.5 | -3.4 | DNA-binding repressor (NCBI) | compare |
| b0004 | thrC | -0.5 | -3.3 | threonine synthase (NCBI) | compare |
| b1762 | b1762 | -0.5 | -1.5 | orf, hypothetical protein (VIMSS) | compare |
| b1363 | trkG | -0.5 | -0.5 | Rac prophage; potassium transporter subunit (NCBI) | compare |
| b1130 | phoP | -0.5 | -0.8 | DNA-binding response regulator in two-component regulatory system with PhoQ (NCBI) | compare |
| b3341 | rpsG | -0.5 | -0.6 | 30S ribosomal protein S7 (NCBI) | compare |
| b0965 | b0965 | -0.5 | -1.7 | orf, hypothetical protein (VIMSS) | compare |
| b0438 | clpX | -0.5 | -2.9 | ATP-dependent protease ATP-binding subunit (NCBI) | compare |