Experiment set15TCH724 for Dickeya dianthicola ME23

M9+sucrose

Group: carbon source
Media: M9+sucrose
Culturing: DdiaME23, 24 well plate
By: Tyler on 1/24/22

Specific Phenotypes

For 3 genes in this experiment

SEED Subsystems

Subsystem	#Specific
Carboxysome	1
Respiratory dehydrogenases 1	1

Metabolic Maps

Color code by fitness: see overview map or list of maps.

Maps containing gene(s) with specific phenotypes:

• Oxidative phosphorylation

MetaCyc Pathways

Pathways that contain genes with specific phenotypes:

Pathway	#Steps	#Present	#Specific
NADH to nitrate electron transfer	2	2	1
nitrate reduction VIIIb (dissimilatory)	2	2	1
NADH to cytochrome bd oxidase electron transfer I	2	2	1
NADH to cytochrome bd oxidase electron transfer II	2	2	1
NADH to cytochrome aa3 oxidase electron transfer	2	1	1
NADH to cytochrome bo oxidase electron transfer II	2	1	1
NADH to cytochrome bo oxidase electron transfer I	2	1	1
aerobic respiration III (alternative oxidase pathway)	3	2	1
aerobic respiration II (cytochrome c) (yeast)	4	2	1
aerobic respiration I (cytochrome c)	4	2	1
mitochondrial NADPH production (yeast)	5	3	1
NAD(P)/NADPH interconversion	6	4	1
Fe(II) oxidation	6	1	1
superpathway of NAD/NADP - NADH/NADPH interconversion (yeast)	8	6	1