Experiment set15TCH696 for Dickeya dadantii 3937

M9+polygalacturonate

Group: carbon source
Media: M9+polygalacturonate
Culturing: Dda3937, 24 well plate
By: Tyler on 1/24/22

Specific Phenotypes

For 3 genes in this experiment

SEED Subsystems

Subsystem	#Specific
Lactose and Galactose Uptake and Utilization	1
Methionine Biosynthesis	1
Universal stress protein family	1

Metabolic Maps

Color code by fitness: see overview map or list of maps.

Maps containing gene(s) with specific phenotypes:

• Methionine metabolism
• Biosynthesis of plant hormones

MetaCyc Pathways

Pathways that contain genes with specific phenotypes:

Pathway	#Steps	#Present	#Specific
S-adenosyl-L-methionine salvage II	3	2	1
S-adenosyl-L-methionine salvage I	4	4	1
L-methionine biosynthesis III	4	3	1
L-methionine biosynthesis I	5	5	1
seleno-amino acid biosynthesis (plants)	5	3	1
L-methionine biosynthesis II	6	5	1
superpathway of L-homoserine and L-methionine biosynthesis	8	8	1
superpathway of S-adenosyl-L-methionine biosynthesis	9	9	1
superpathway of L-methionine biosynthesis (transsulfuration)	9	9	1
superpathway of L-methionine biosynthesis (by sulfhydrylation)	12	11	1
superpathway of L-lysine, L-threonine and L-methionine biosynthesis II	15	13	1
superpathway of L-lysine, L-threonine and L-methionine biosynthesis I	18	18	1
superpathway of seleno-compound metabolism	19	6	1
aspartate superpathway	25	24	1