Experiment set15TCH687 for Dickeya dadantii 3937

M9+glucose

Group: carbon source
Media: M9+glucose
Culturing: Dda3937, 24 well plate
By: Tyler on 1/24/22

Specific Phenotypes

For 2 genes in this experiment

SEED Subsystems

Subsystem	#Specific
Methionine Biosynthesis	1
Methionine Degradation	1
NAD and NADP cofactor biosynthesis global	1
NAD regulation	1
Redox-dependent regulation of nucleus processes	1
Staphylococcal pathogenicity islands SaPI	1

Metabolic Maps

Color code by fitness: see overview map or list of maps.

Maps containing gene(s) with specific phenotypes:

• Nicotinate and nicotinamide metabolism
• Lysine biosynthesis
• Glutathione metabolism
• Nucleotide sugars metabolism
• Lipopolysaccharide biosynthesis
• Sphingolipid metabolism
• 1,4-Dichlorobenzene degradation
• Caprolactam degradation

MetaCyc Pathways

Pathways that contain genes with specific phenotypes:

Pathway	#Steps	#Present	#Specific
aldoxime degradation	3	1	1
NAD salvage pathway V (PNC V cycle)	5	3	1
NAD salvage pathway I (PNC VI cycle)	7	5	1
NAD salvage (plants)	11	5	1
superpathway of NAD biosynthesis in eukaryotes	14	7	1