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  • Experiment set15TCH687 for Dickeya dadantii 3937

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    M9+glucose

    Group: carbon source
    Media: M9+glucose
    Culturing: Dda3937, 24 well plate
    By: Tyler on 1/24/22

    Specific Phenotypes

    For 2 genes in this experiment

    SEED Subsystems

    Subsystem #Specific
    Methionine Biosynthesis 1
    Methionine Degradation 1
    NAD and NADP cofactor biosynthesis global 1
    NAD regulation 1
    Redox-dependent regulation of nucleus processes 1
    Staphylococcal pathogenicity islands SaPI 1

    Metabolic Maps

    Color code by fitness: see overview map or list of maps.

    Maps containing gene(s) with specific phenotypes:

    • Nicotinate and nicotinamide metabolism
    • Lysine biosynthesis
    • Glutathione metabolism
    • Nucleotide sugars metabolism
    • Lipopolysaccharide biosynthesis
    • Sphingolipid metabolism
    • 1,4-Dichlorobenzene degradation
    • Caprolactam degradation

    MetaCyc Pathways

    Pathways that contain genes with specific phenotypes:

    Pathway #Steps #Present #Specific
    aldoxime degradation 3 1 1
    NAD salvage pathway V (PNC V cycle) 5 3 1
    NAD salvage pathway I (PNC VI cycle) 7 5 1
    NAD salvage (plants) 11 5 1
    superpathway of NAD biosynthesis in eukaryotes 14 7 1