Experiment set15IT080 for Pseudomonas putida KT2440

Compare to:

Oleic acid carbon source

200 most important genes:

  gene name fitness t score description  
PP_5659 -7.9 -5.5 protein of unknown function compare
PP_5015 -6.2 -4.3 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
PP_1985 -6.1 -7.2 3-isopropylmalate dehydratase large subunit compare
PP_0368 -6.1 -14.1 putative Acyl-CoA dehydrogenase compare
PP_1986 -6.0 -4.2 3-isopropylmalate dehydratase small subunit compare
PP_3511 -5.9 -10.5 Branched-chain-amino-acid aminotransferase compare
PP_0290 -5.8 -7.9 Imidazole glycerol phosphate synthase subunit HisH compare
PP_0422 -5.3 -8.1 Indole-3-glycerol phosphate synthase compare
PP_4723 -5.3 -15.3 Carbamoyl-phosphate synthase large chain compare
PP_5289 -5.3 -6.6 Acetylglutamate kinase compare
PP_4724 -5.2 -9.4 Carbamoyl-phosphate synthase small chain compare
PP_4700 -5.2 -3.6 pantothenate synthetase compare
PP_0967 -5.2 -10.3 histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) compare
PP_5155 -5.1 -6.8 D-3-phosphoglycerate dehydrogenase / alpha-ketoglutarate reductase compare
PP_0356 -5.1 -11.2 malate synthase G compare
PP_4680 -5.1 -19.0 acetohydroxybutanoate synthase / acetolactate synthase compare
PP_4909 -5.1 -11.3 phosphoserine phosphatase compare
PP_0966 -5.0 -11.4 Histidinol dehydrogenase compare
PP_2137 -5.0 -4.8 beta-ketoadipyl CoA thiolase, beta component compare
PP_4890 -4.9 -7.5 ATP phosphoribosyltransferase regulatory subunit compare
PP_2136 -4.9 -8.1 enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase compare
PP_1988 -4.8 -8.7 3-isopropylmalate dehydrogenase compare
PP_0293 -4.8 -2.8 Imidazole glycerol phosphate synthase subunit HisF compare
PP_5185 -4.8 -9.7 acetylglutamate kinase-like protein (regulatory domain)/amino acid N-acetyltransferase compare
PP_0292 -4.7 -5.0 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
PP_0082 -4.7 -7.8 tryptophan synthase alpha chain compare
PP_4678 -4.7 -13.0 Ketol-acid reductoisomerase compare
PP_1088 -4.7 -14.6 Argininosuccinate synthase compare
PP_4116 -4.5 -12.0 isocitrate lyase compare
PP_2371 -4.0 -8.9 Sulphite reductase hemoprotein, beta subunit compare
PP_0184 -4.0 -6.9 Argininosuccinate lyase compare
PP_0083 -4.0 -8.9 tryptophan synthase beta chain compare
PP_5128 -4.0 -7.2 Dihydroxy-acid dehydratase compare
PP_1079 -4.0 -6.1 Ornithine carbamoyltransferase compare
PP_0965 -3.9 -9.2 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
PP_4679 -3.8 -6.9 acetohydroxybutanoate synthase / acetolactate synthase compare
PP_1664 -3.8 -6.7 phosphoribosylglycinamide formyltransferase 1 compare
PP_0691 -3.7 -5.9 Glutamate 5-kinase compare
PP_3999 -3.7 -11.4 Uroporphyrinogen-III C-methyltransferase/Precorrin-2 dehydrogenase/Sirohydrochlorin ferrochelatase compare
PP_5097 -3.7 -12.9 homoserine O-acetyltransferase compare
PP_4999 -3.7 -2.5 dihydroorotase-like protein compare
PP_0834 -3.7 -2.5 Sec translocation complex subunit YajC compare
PP_0289 -3.6 -8.2 Imidazoleglycerol-phosphate dehydratase compare
PP_1995 -3.5 -8.7 N-(5'-phosphoribosyl)anthranilate isomerase compare
PP_5014 -3.5 -4.4 Phosphoribosyl-AMP cyclohydrolase compare
PP_2000 -3.3 -2.3 amidophosphoribosyl transferase compare
PP_1216 -3.3 -3.2 Holliday junction ATP-dependent DNA helicase RuvA compare
PP_2370 -3.3 -3.5 conserved protein of unknown function compare
PP_1237 -3.2 -2.8 4-hydroxy-tetrahydrodipicolinate synthase compare
PP_4549 -3.2 -9.7 long-chain-fatty-acid/CoA ligase compare
PP_1025 -3.2 -11.5 2-isopropylmalate synthase compare
PP_4699 -2.9 -5.0 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
PP_2327 -2.9 -7.0 transcriptional dual regulator / CysB-O-acetyl-L-serine compare
PP_4098 -2.8 -2.6 UvrABC system protein C compare
PP_0417 -2.8 -14.8 Anthranilate synthase component 1 compare
PP_2001 -2.8 -8.8 O-succinylhomoserine sulfhydrylase compare
PP_4799 -2.8 -4.9 putative Muramoyltetrapeptide carboxypeptidase compare
PP_1654 -2.7 -4.5 cysteine synthase B compare
PP_5085 -2.7 -8.1 malic enzyme B compare
PP_5098 -2.6 -6.3 methionine biosynthesis protein MetW compare
PP_1110 -2.6 -3.8 serine acetyltransferase compare
PP_0063 -2.6 -1.8 putative Lipid A biosynthesis lauroyl acyltransferase compare
PP_2328 -2.5 -7.9 Phosphoadenosine phosphosulfate reductase compare
PP_1381 -2.4 -1.4 4-carboxymuconolactone decarboxylase compare
PP_0420 -2.4 -7.6 aminodeoxychorismate synthase / para-aminobenzoate synthase multi-enzyme complex compare
PP_5347 -2.4 -10.7 pyruvate carboxylase subunit A compare
PP_0393 -2.4 -2.3 putative 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase compare
PP_0421 -2.3 -5.8 Anthranilate phosphoribosyltransferase compare
PP_0022 -2.3 -1.3 hypothetical protein compare
PP_5303 -2.2 -4.2 aminoacrylate/iminopropionate hydrolase/deaminase compare
PP_0001 -2.2 -3.0 probable chromosome-partitioning protein compare
PP_1109 -2.1 -9.8 Transcriptional regulator, GntR family compare
PP_4126 -2.1 -1.4 NADH-quinone oxidoreductase subunit I compare
PP_1845 -2.1 -4.7 Enoyl-CoA hydratase/isomerase family protein compare
PP_0787 -2.1 -7.0 quinolinate phosphoribosyltransferase (decarboxylating) monomer compare
PP_0856 -2.0 -1.4 conserved lipoprotein of unknown function compare
PP_3248 -2.0 -2.3 Dyp-type peroxidase family protein compare
PP_1111 -2.0 -6.2 putative Synthetase compare
PP_t29 -1.8 -2.9 tRNA-Ala compare
PP_5346 -1.8 -7.1 pyruvate carboxylase subunit B compare
PP_1054 -1.8 -1.4 Type II secretion pathway protein XcpZ compare
PP_4917 -1.8 -3.5 3',5'-cyclic-nucleotide phosphodiesterase compare
PP_2356 -1.8 -8.5 putative Phytochrome family protein compare
PP_4701 -1.7 -1.5 glucose-6-phosphate isomerase compare
PP_5348 -1.7 -7.7 Transcriptional regulator, LysR family compare
PP_4693 -1.7 -5.2 RNA polymerase-binding transcription factor DksA compare
PP_5095 -1.6 -1.3 pyrroline-5-carboxylate reductase compare
PP_4782 -1.6 -3.5 Phosphomethylpyrimidine kinase compare
PP_4124 -1.6 -3.3 NADH-quinone oxidoreductase subunit G compare
PP_4122 -1.6 -2.1 proton-pumping NADH:ubiquinone oxidoreductase, respiratory complex I, subunit E compare
PP_1553 -1.5 -2.7 conserved protein of unknown function compare
PP_0735 -1.5 -1.8 molybdopterin-synthase adenylyltransferase compare
PP_5309 -1.5 -2.5 oxidative and nitrosative stress transcriptional dual regulator compare
PP_4964 -1.5 -3.1 D-erythrose 4-phosphate dehydrogenase compare
PP_1912 -1.5 -2.9 Phosphate acyltransferase compare
PP_4943 -1.5 -1.5 putative Glycosyl transferase compare
PP_5198 -1.5 -2.4 conserved protein of unknown function compare
PP_0852 -1.5 -2.2 Transcriptional regulator, Cro/CI family compare
PP_4131 -1.4 -4.8 NADH-quinone oxidoreductase subunit N compare
PP_1231 -1.4 -4.7 quinolinate synthase [4Fe-4S] cluster subunit compare
PP_4129 -1.4 -3.2 NADH:ubiquinone oxidoreductase, membrane subunit L compare
PP_1176 -1.4 -1.2 conserved protein of unknown function compare
PP_2087 -1.4 -2.5 CmpX protein compare
PP_5007 -1.4 -3.1 Polyhydroxyalkanoate granule-associated protein GA2 compare
PP_3790 -1.4 -6.8 diaminopimelate epimerase compare
PP_3449 -1.3 -2.1 conserved exported protein of unknown function compare
PP_4120 -1.3 -2.7 NADH-quinone oxidoreductase subunit B compare
PP_3903 -1.3 -2.1 conserved protein of unknown function compare
PP_4937 -1.3 -2.9 toluene tolerance protein compare
PP_1353 -1.3 -2.1 conserved membrane protein of unknown function compare
PP_4993 -1.3 -2.5 Glutathione synthetase compare
PP_2402 -1.3 -2.8 putative Sensor histidine kinase compare
PP_4942 -1.3 -2.1 conserved protein of unknown function compare
PP_5528 -1.3 -1.3 conserved protein of unknown function compare
PP_1428 -1.3 -1.3 Sigma factor AlgU negative regulatory protein compare
PP_5352 -1.2 -6.8 DNA-dependent ATPase I and helicase II, nucleotide Excision Repair Complex compare
PP_5104 -1.2 -5.1 thiazole synthase compare
PP_5640 -1.2 -3.9 conserved protein of unknown function compare
PP_0630 -1.2 -1.0 DNA gyrase inhibitor YacG compare
PP_2336 -1.2 -1.7 aconitate hydratase 1 compare
PP_5571 -1.1 -1.4 conserved protein of unknown function compare
PP_1041 -1.1 -2.2 twin arginine protein export complex subunit compare
PP_4824 -1.1 -3.7 Sensor histidine kinase/response regulator compare
PP_4342 -1.1 -2.4 flagellar synthesis regulator, putative ATPase compare
PP_5453 -1.1 -1.3 conserved protein of unknown function compare
PP_1233 -1.1 -2.9 sulfurtransferase compare
PP_1528 -1.1 -1.1 conserved protein of unknown function compare
PP_2378 -1.1 -1.9 Fe/S biogenesis protein NfuA compare
PP_1763 -1.1 -3.3 putative oxidoreductase compare
PP_3776 -1.1 -5.9 putative permease (RarD protein) compare
PP_5017 -1.0 -1.0 Sec-independent protein translocase protein TatB compare
PP_0291 -1.0 -1.2 conserved protein of unknown function compare
PP_1629 -1.0 -3.2 Protein RecA compare
PP_1589 -1.0 -3.9 uridylyltransferase compare
PP_1824 -1.0 -1.4 Smr domain protein compare
PP_2302 -1.0 -3.4 DNA-binding, ATP-dependent protease compare
PP_2354 -1.0 -5.7 Sensory box histidine kinase/response regulator compare
PP_4696 -1.0 -2.9 Nitrogen regulation protein NR(I) compare
PP_4922 -1.0 -6.5 Phosphomethylpyrimidine synthase compare
PP_5114 -1.0 -2.1 putative adenine methyltransferase compare
PP_3902 -1.0 -2.4 conserved protein of unknown function compare
PP_1968 -1.0 -3.9 TetR family transcriptional regulator compare
PP_4684 -1.0 -4.5 conserved protein of unknown function with kinase-like domain compare
PP_5324 -1.0 -1.9 Response regulator compare
PP_2280 -1.0 -2.2 conserved protein of unknown function compare
PP_2390 -0.9 -3.6 Transcriptional regulator, LysR family compare
PP_1348 -0.9 -3.3 putative MutT/nudix family protein/thiamine-phosphate pyrophosphorylase compare
PP_2475 -0.9 -3.0 Transcriptional regulator, TetR family compare
PP_3014 -0.9 -1.8 conserved exported protein of unknown function compare
PP_1362 -0.9 -2.6 pyruvate kinase II compare
PP_4738 -0.9 -1.9 conserved exported protein of unknown function compare
PP_0123 -0.9 -3.8 DNA polymerase I, 5 compare
PP_4726 -0.9 -2.2 Chaperone protein DnaJ compare
PP_3505 -0.9 -1.2 conserved protein of unknown function compare
PP_0435 -0.9 -7.2 Peptidase, M23/M37 family compare
PP_4329 -0.9 -1.5 FlhB domain protein compare
PP_2929 -0.9 -3.8 Carboxynorspermidine/carboxyspermidine decarboxylase compare
PP_5338 -0.9 -1.6 aspartate ammonia-lyase compare
PP_0035 -0.9 -1.7 putative bactoprenol-linked glycose transferase compare
PP_3105 -0.9 -1.6 conserved membrane protein of unknown function compare
PP_3808 -0.9 -1.5 Antibiotic synthesis protein MbtH compare
PP_2433 -0.8 -1.7 conserved protein of unknown function compare
PP_3241 -0.8 -0.9 conserved exported protein of unknown function compare
PP_0370 -0.8 -6.1 Acyl-CoA dehydrogenase family protein compare
PP_4910 -0.8 -1.8 conserved protein of unknown function compare
PP_1556 -0.8 -1.7 conserved protein of unknown function compare
PP_5705 -0.8 -1.5 protein of unknown function compare
PP_2379 -0.8 -2.9 putative cytochrome oxidase biogenesis protein compare
PP_2083 -0.8 -2.7 putative Lipase compare
PP_0919 -0.8 -1.9 conserved protein of unknown function compare
PP_2650 -0.8 -2.0 putative 4-hydroxybutyrate dehydrogenase compare
PP_0685 -0.8 -1.5 conserved protein of unknown function compare
PP_5604 -0.8 -1.1 putative subtilisin-like serine protease compare
PP_2084 -0.8 -3.0 Putative regulator of ribonuclease activity compare
PP_3333 -0.8 -1.7 conserved protein of unknown function compare
PP_0978 -0.8 -2.2 conserved protein of unknown function compare
PP_5055 -0.8 -2.8 Sulfurtransferase compare
PP_3286 -0.8 -2.4 DNA-binding transcriptional repressor PaaX(phenylacetyl-CoA) compare
PP_1063 -0.8 -4.2 DNA-binding transcriptional regulator, homocysteine-binding compare
PP_2029 -0.8 -1.2 von Willebrand factor type A domain protein compare
PP_2337 -0.8 -1.6 aconitate isomerase compare
PP_1628 -0.8 -2.7 NMN amidohydrolase compare
PP_0366 -0.7 -3.8 dethiobiotin synthetase compare
PP_0666 -0.7 -2.6 conserved protein of unknown function compare
PP_2032 -0.7 -1.9 putative ATPase compare
PP_0218 -0.7 -3.9 Sensory box protein compare
PP_0261 -0.7 -2.7 adenosine-3'(2'),5'-bisphosphate nucleotidase compare
PP_0509 -0.7 -2.4 conserved protein of unknown function compare
PP_2857 -0.7 -1.5 conserved exported protein of unknown function compare
PP_1632 -0.7 -0.6 conserved protein of unknown function compare
PP_0413 -0.7 -4.9 Polyamine ABC transporter, permease protein compare
PP_3787 -0.7 -4.5 conserved protein of unknown function compare
PP_3789 -0.7 -4.4 putative Efflux transporter compare
PP_2107 -0.7 -1.0 conserved protein of unknown function compare
PP_4094 -0.7 -1.5 conserved protein of unknown function compare
PP_5279 -0.7 -1.8 conserved protein of unknown function compare
PP_2513 -0.7 -2.8 4-oxalomesaconate tautomerase compare
PP_5393 -0.7 -0.9 putative metal-binding chaperone compare
PP_1206 -0.7 -3.1 basic-amino-acid specific porin OprD compare
PP_0406 -0.7 -4.0 Nucleotidyltransferase family protein compare


Specific Phenotypes

For 1 genes in this experiment

For carbon source Oleic acid in Pseudomonas putida KT2440

For carbon source Oleic acid across organisms