Experiment set15IT026 for Agrobacterium fabrum C58

Compare to:

Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days

200 most important genes:

  gene name fitness t score description  
Atu3544 -7.9 -5.5 arsenical pump membrane protein compare
Atu2522 -7.1 -12.9 agrobacterium chromosomal virulence protein B compare
Atu3353 -6.1 -8.4 mannose-1-phosphate guanylyltransferase compare
Atu2379 -5.8 -9.7 phosphomannomutase compare
Atu0602 -5.7 -8.8 glutamine synthetase compare
Atu0978 -5.7 -8.1 two component response regulator compare
Atu1021 -5.6 -3.6 outer membrane protein compare
Atu0041 -5.3 -3.3 glutamine amidotransferase compare
Atu4617 -5.3 -12.8 dTDP-D-glucose-4,6-dehydratase compare
Atu3311 -5.1 -18.8 phosphomannose isomerase compare
Atu0876 -5.1 -2.8 superoxide dismutase compare
Atu2183 -5.1 -7.1 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu4613 -5.1 -14.7 glycosyltransferase compare
Atu0659 -5.0 -6.9 NTP pyrophosphohydrolase, MutT family compare
Atu0421 -4.9 -1.6 ABC transporter, membrane spanning protein compare
Atu3598 -4.9 -2.7 thiol:disulfide interchange protein compare
Atu2684 -4.9 -2.7 hypothetical protein compare
Atu4616 -4.8 -2.6 dTDP-4-dehydrorhamnose reductase compare
Atu1030 -4.8 -2.6 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu6098 -4.8 -1.5 transcriptional regulator, HTH family compare
Atu4615 -4.5 -11.0 glucose-1-phosphate thymidylyltransferase compare
Atu4618 -4.4 -14.2 dTDP-rhamnose-3,5-epimerase compare
Atu0043 -4.4 -4.6 imidazoleglycerol-phosphate dehydratase compare
Atu1359 -4.4 -1.4 dnaK deletion suppressor protein compare
Atu3469 -4.3 -5.1 phosphoglyceromutase compare
Atu0422 -4.3 -2.3 ABC transporter, membrane spanning protein compare
Atu4614 -4.2 -9.6 glycosyltransferase compare
Atu2728 -4.2 -2.9 beta (1-->2) glucan export ATP-binding protein compare
Atu0434 -4.1 -2.7 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu0678 -4.0 -7.7 histidyl-tRNA synthetase compare
Atu4217 -4.0 -2.2 TetR family transcriptional regulator compare
Atu0971 -4.0 -4.7 two component sensor kinase compare
Atu0039 -3.9 -4.0 imidazoleglycerol-phosphate synthase cyclase compare
Atu0040 -3.9 -1.7 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu0679 -3.7 -7.5 ATP phosphoribosyltransferase compare
Atu0979 -3.7 -8.8 two component sensor kinase compare
Atu0999 -3.6 -2.5 magnesium transport protein compare
Atu1470 -3.5 -1.6 Camphor resistance protein compare
Atu0977 -3.4 -5.0 serine protease DO-like protease compare
Atu2125 -3.4 -2.5 ABC transporter, nucleotide binding/ATPase protein compare
Atu0601 -3.4 -9.6 oxidoreductase compare
Atu0537 -3.3 -9.3 histidinol dehydrogenase compare
Atu4166 -3.3 -2.8 UDP-glucose 4-epimerase compare
Atu2832 -3.2 -4.3 tRNA modification GTPase compare
Atu2521 -3.2 -18.3 Protein regulated by acid pH compare
Atu0038 -3.1 -6.3 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu0086 -3.0 -1.4 ribosome-binding factor A compare
Atu3908 -2.9 -14.9 GntR family transcriptional regulator compare
Atu3706 -2.9 -10.4 D-3-phosphoglycerate dehydrogenase compare
Atu4610 -2.9 -10.3 sugar nucleotide epimerase/dehydratase compare
Atu1645 -2.9 -8.1 ABC transporter, substrate binding protein compare
Atu1644 -2.7 -3.2 hypothetical protein compare
Atu0030 -2.6 -2.0 phosphocarrier protein HPr compare
Atu1750 -2.6 -2.2 phosphoribosyl c-AMP cyclohydrolase compare
Atu1647 -2.5 -7.8 ABC transporter, membrane spanning protein compare
Atu1163 -2.5 -2.5 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu2200 -2.5 -4.1 cold shock protein compare
Atu2821 -2.4 -6.9 transcriptional regulator, GntR family compare
Atu5125 -2.4 -5.9 GntR family transcriptional regulator compare
Atu2289 -2.4 -14.5 anthranilate synthase component I and II compare
Atu8095 -2.4 -8.6 hypothetical protein compare
Atu3885 -2.4 -7.7 inositol monophosphatase compare
Atu1646 -2.3 -7.6 ABC transporter, nucleotide binding/ATPase protein compare
Atu0499 -2.2 -8.3 hypothetical protein compare
Atu0912 -2.2 -0.9 Na+/H+ antiporter compare
Atu2584 -2.2 -8.4 hypothetical protein compare
Atu2439 -2.2 -1.7 hypothetical protein compare
Atu1810 -2.2 -1.4 hypothetical protein compare
Atu4514 -2.2 -5.0 RpiR family transcriptional regulator compare
Atu4072 -2.2 -2.6 nodulation protein N compare
Atu4711 -2.1 -4.2 two component sensor kinase compare
Atu0017 -2.1 -4.3 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu2585 -2.1 -9.9 hypothetical protein compare
Atu1902 -2.1 -7.2 transketolase compare
Atu2274 -2.1 -9.0 cation efflux system protein compare
Atu3001 -2.0 -3.5 hypothetical protein compare
Atu0769 -2.0 -1.6 protoheme IX farnesyltransferase compare
Atu0784 -2.0 -3.5 hypothetical protein compare
Atu0190 -2.0 -6.0 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu2592 -2.0 -8.2 hypothetical protein compare
Atu2583 -2.0 -13.2 glycosyltransferase compare
Atu1588 -1.9 -8.1 homoserine dehydrogenase compare
Atu3763 -1.9 -1.1 hypothetical protein compare
Atu1076 -1.9 -4.9 colicin V production protein compare
Atu2555 -1.9 -5.7 L-lysine 2,3-aminomutase compare
Atu0099 -1.9 -9.7 prephenate dehydratase compare
Atu2040 -1.9 -3.3 phosphoserine phosphatase compare
Atu4149 -1.9 -11.9 UDP-glucose 6-dehydrogenase compare
Atu3727 -1.9 -4.9 hypothetical protein compare
Atu0368 -1.9 -5.0 tRNA pseudouridine synthase I compare
Atu2036 -1.9 -10.5 acetolactate synthase III, large subunit compare
Atu2052 -1.8 -6.7 hypothetical protein compare
Atu1793 -1.8 -7.4 phosphatidylcholine synthase compare
Atu4609 -1.8 -10.4 glycosyltransferase compare
Atu3012 -1.8 -2.6 hypothetical protein compare
Atu2831 -1.8 -4.3 glucose inhibited division protein A compare
Atu3910 -1.7 -2.7 LamB/YcsF family protein compare
Atu2577 -1.7 -14.3 ABC transporter, nucleotide binding/ATPase protein compare
Atu2590 -1.7 -9.5 hypothetical protein compare
Atu2591 -1.7 -10.6 glucosyltransferase compare
Atu4148 -1.7 -8.3 UDP-glucuronic acid epimerase compare
Atu1683 -1.7 -1.9 hypothetical protein compare
Atu3634 -1.7 -4.3 penicillin-binding protein dacf precursor compare
Atu2207 -1.7 -3.9 two component sensor kinase compare
Atu0995 -1.7 -6.2 hypothetical protein compare
Atu0331 -1.7 -2.5 sigma-54 modulation protein compare
Atu1904 -1.6 -2.9 transcriptional regulator compare
Atu2245 -1.6 -8.4 Na+/Pi-cotransporter compare
Atu3517 -1.6 -4.1 acetyltransferase compare
Atu4173 -1.6 -2.2 phosphoenolpyruvate-protein phosphotransferase compare
Atu1619 -1.6 -3.7 protein-export membrane protein SECG compare
Atu0923 -1.6 -5.7 hypothetical protein compare
Atu2582 -1.6 -7.1 UDP-glucose/GDP-mannose dehydrogenase compare
Atu1285 -1.6 -6.9 metal dependent hydrolase compare
Atu0153 -1.6 -4.9 transcriptional regulator, Fur family compare
Atu1688 -1.6 -4.2 indole-3-glycerol-phosphate synthase compare
Atu4608 -1.6 -10.7 hypothetical protein compare
Atu1447 -1.6 -2.5 two component sensor kinase compare
Atu1803 -1.5 -4.6 cold shock protein compare
Atu1327 -1.5 -2.5 NADH-ubiquinone oxidoreductase compare
Atu1182 -1.5 -2.4 hypothetical protein compare
Atu2746 -1.5 -2.9 hypothetical protein compare
Atu1417 -1.5 -7.8 enoyl-CoA hydratase compare
Atu1354 -1.5 -1.3 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase compare
Atu0925 -1.5 -2.5 hypothetical protein compare
Atu0836 -1.5 -3.5 Glutathione-S-transferase compare
Atu0051 -1.5 -4.3 two component sensor kinase compare
Atu3732 -1.5 -7.3 hemolysin compare
Atu3707 -1.5 -2.2 phosphoserine aminotransferase compare
Atu3613 -1.5 -4.3 hypothetical protein compare
Atu2113 -1.5 -2.5 N-acetylmuramoyl-L-alanine amidase compare
Atu3730 -1.5 -2.0 hypothetical protein compare
Atu0050 -1.5 -4.1 two component response regulator compare
Atu4889 -1.5 -5.9 hypothetical protein compare
Atu3219 -1.4 -8.3 dihydroxy-acid dehydratase compare
Atu4323 -1.4 -5.1 ribitol 2-dehydrogenase compare
Atu4890 -1.4 -2.5 IS426 transposase compare
Atu1344 -1.4 -2.2 hypothetical protein compare
Atu3010 -1.4 -8.3 hypothetical protein compare
Atu0026 -1.4 -1.1 hypothetical protein compare
Atu3006 -1.3 -5.2 hypothetical protein compare
Atu1705 -1.3 -5.3 SEC-independent protein translocase protein compare
Atu0142 -1.3 -1.5 cytochrome o ubiquinol oxidase subunit II compare
Atu1300 -1.3 -7.2 MFS permease compare
Atu4773 -1.3 -1.8 two component response regulator compare
Atu0498 -1.3 -4.8 hypothetical protein compare
Atu0029 -1.3 -5.0 S-adenosylhomocysteine hydrolase compare
Atu4887 -1.3 -4.7 hypothetical protein compare
Atu0636 -1.3 -5.7 hypothetical protein compare
Atu1205 -1.2 -8.6 threonine dehydratase compare
Atu2554 -1.2 -1.9 lysyl-tRNA synthetase compare
Atu3739 -1.2 -2.4 phosphoglycerate kinase compare
Atu2640 -1.2 -4.6 hypothetical protein compare
Atu1774 -1.2 -4.6 ABC transporter, substrate binding protein (peptide) compare
Atu4635 -1.2 -3.3 hypothetical protein compare
Atu4317 -1.2 -1.9 TetR family transcriptional regulator compare
Atu1687 -1.2 -4.4 anthranilate phosphoribosyltransferase compare
Atu0388 -1.2 -8.0 two component sensor kinase compare
Atu1495 -1.1 -2.4 hypothetical protein compare
Atu4502 -1.1 -5.3 cobalamin synthesis protein compare
Atu2730 -1.1 -7.5 beta (1-->2) glucan biosynthesis protein compare
Atu0723 -1.1 -1.4 FAD dependent oxidoreductase compare
Atu2155 -1.1 -8.4 methionine synthase compare
Atu4892 -1.1 -7.6 hypothetical protein compare
Atu1518 -1.1 -3.5 transcriptional regulator, Fur family compare
Atu3608 -1.1 -4.7 hypothetical protein compare
Atu3698 -1.1 -2.8 thioredoxin compare
Atu1874 -1.1 -2.5 RecA protein compare
Atu3014 -1.1 -2.2 hypothetical protein compare
Atu1364 -1.1 -3.6 ATP-dependent Clp protease, ATP-binding subunit compare
Atu3886 -1.1 -5.2 lysophospholipase compare
Atu1238 -1.0 -5.1 polysaccharide export protein compare
Atu3013 -1.0 -4.8 hypothetical protein compare
Atu2811 -1.0 -5.6 hypothetical protein compare
Atu1099 -1.0 -4.8 hypothetical protein compare
Atu4888 -1.0 -3.3 hypothetical protein compare
Atu1678 -1.0 -5.2 S-adenosylmethionine tRNA ribosyltransferase-isomerase compare
Atu1131 -1.0 -5.3 outer membrane protein compare
Atu2532 -1.0 -2.9 transcriptional regulator, MarR family compare
Atu0189 -1.0 -1.5 ABC transporter, membrane spanning protein (peptide) compare
Atu5007 -1.0 -4.4 santhopine-responsive transcriptional repressor compare
Atu2238 -1.0 -4.0 ubiquinol-cytochrome c reductase cytochrome b subunit compare
Atu4873 -1.0 -4.4 TetR family transcriptional regulator compare
Atu2237 -1.0 -3.0 cytochrome c1 compare
Atu1892 -1.0 -2.4 hypothetical protein compare
Atu0357 -1.0 -5.7 phosphate starvation inducible protein compare
Atu2718 -1.0 -4.0 homoserine O-succinyltransferase compare
Atu1677 -1.0 -2.7 queuine tRNA-ribosyltransferase compare
Atu2790 -1.0 -1.6 3-isopropylmalate dehydratase, small subunit compare
Atu6114 -1.0 -1.4 hypothetical protein compare
Atu8087 -0.9 -0.9 putative peptidoglycan binding protein compare
Atu3486 -0.9 -1.5 DeoR family transcriptional regulator compare
Atu0777 -0.9 -0.9 hypothetical protein compare
Atu2824 -0.9 -3.0 hypothetical protein compare
Atu1103 -0.9 -2.2 rRNA-adenine N6,N6-dimethyltransferase compare
Atu5114 -0.9 -2.0 hypothetical protein compare
Atu2123 -0.9 -2.6 methylenetetrahydrofolate reductase compare
Atu5107 -0.9 -2.9 hypothetical protein compare
Atu0631 -0.9 -4.1 molybdenum cofactor biosynthesis protein B compare
Atu1906 -0.9 -3.3 ABC transporter, membrane spanning protein compare


Specific Phenotypes

For 6 genes in this experiment

For in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days in Agrobacterium fabrum C58

For in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days across organisms