Experiment set15IT023 for Agrobacterium fabrum C58

Compare to:

Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days

200 most important genes:

  gene name fitness t score description  
Atu2522 -7.0 -10.7 agrobacterium chromosomal virulence protein B compare
Atu0978 -6.3 -7.5 two component response regulator compare
Atu2183 -6.1 -7.3 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu0659 -5.7 -4.0 NTP pyrophosphohydrolase, MutT family compare
Atu0188 -5.6 -2.7 ABC transporter, membrane spanning protein (peptide) compare
Atu0039 -5.4 -2.6 imidazoleglycerol-phosphate synthase cyclase compare
Atu3311 -5.1 -15.0 phosphomannose isomerase compare
Atu0041 -5.0 -2.5 glutamine amidotransferase compare
Atu3353 -5.0 -10.9 mannose-1-phosphate guanylyltransferase compare
Atu4166 -4.9 -1.7 UDP-glucose 4-epimerase compare
Atu0421 -4.8 -1.2 ABC transporter, membrane spanning protein compare
Atu0602 -4.7 -9.3 glutamine synthetase compare
Atu2684 -4.6 -2.0 hypothetical protein compare
Atu6098 -4.6 -1.1 transcriptional regulator, HTH family compare
Atu1030 -4.5 -1.9 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu4616 -4.4 -1.9 dTDP-4-dehydrorhamnose reductase compare
Atu2379 -4.3 -10.6 phosphomannomutase compare
Atu1359 -4.2 -1.0 dnaK deletion suppressor protein compare
Atu3544 -4.2 -12.3 arsenical pump membrane protein compare
Atu0601 -4.2 -8.0 oxidoreductase compare
Atu0679 -4.2 -7.3 ATP phosphoribosyltransferase compare
Atu4615 -4.1 -8.9 glucose-1-phosphate thymidylyltransferase compare
Atu0043 -4.1 -3.5 imidazoleglycerol-phosphate dehydratase compare
Atu4614 -4.0 -6.3 glycosyltransferase compare
Atu4618 -4.0 -11.9 dTDP-rhamnose-3,5-epimerase compare
Atu0422 -4.0 -1.7 ABC transporter, membrane spanning protein compare
Atu4617 -3.9 -6.6 dTDP-D-glucose-4,6-dehydratase compare
Atu0678 -3.7 -5.7 histidyl-tRNA synthetase compare
Atu2040 -3.7 -6.4 phosphoserine phosphatase compare
Atu1021 -3.7 -2.7 outer membrane protein compare
Atu0038 -3.6 -4.4 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu0537 -3.6 -8.3 histidinol dehydrogenase compare
Atu0979 -3.5 -6.9 two component sensor kinase compare
Atu0977 -3.5 -4.2 serine protease DO-like protease compare
Atu3727 -3.5 -4.3 hypothetical protein compare
Atu2728 -3.5 -4.1 beta (1-->2) glucan export ATP-binding protein compare
Atu0777 -3.5 -1.2 hypothetical protein compare
Atu0999 -3.4 -2.4 magnesium transport protein compare
Atu1470 -3.4 -1.2 Camphor resistance protein compare
Atu3885 -3.4 -9.3 inositol monophosphatase compare
Atu0971 -3.3 -5.0 two component sensor kinase compare
Atu3598 -3.2 -1.9 thiol:disulfide interchange protein compare
Atu1750 -3.0 -2.9 phosphoribosyl c-AMP cyclohydrolase compare
Atu0876 -3.0 -2.0 superoxide dismutase compare
Atu3730 -3.0 -1.7 hypothetical protein compare
Atu3908 -3.0 -10.5 GntR family transcriptional regulator compare
Atu4613 -3.0 -10.7 glycosyltransferase compare
Atu3707 -3.0 -3.2 phosphoserine aminotransferase compare
Atu1646 -2.9 -5.6 ABC transporter, nucleotide binding/ATPase protein compare
Atu3706 -2.9 -6.7 D-3-phosphoglycerate dehydrogenase compare
Atu1163 -2.9 -1.7 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu0040 -2.9 -1.4 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu1810 -2.8 -1.0 hypothetical protein compare
Atu4072 -2.8 -1.9 nodulation protein N compare
Atu4317 -2.7 -2.5 TetR family transcriptional regulator compare
Atu4217 -2.6 -1.6 TetR family transcriptional regulator compare
Atu2585 -2.5 -7.8 hypothetical protein compare
Atu1647 -2.5 -7.4 ABC transporter, membrane spanning protein compare
Atu0026 -2.5 -1.1 hypothetical protein compare
Atu1588 -2.5 -8.4 homoserine dehydrogenase compare
Atu5540 -2.4 -1.2 hypothetical protein compare
Atu2439 -2.4 -1.2 hypothetical protein compare
Atu0769 -2.4 -1.2 protoheme IX farnesyltransferase compare
Atu0368 -2.4 -4.5 tRNA pseudouridine synthase I compare
Atu2521 -2.4 -13.1 Protein regulated by acid pH compare
Atu2289 -2.4 -10.0 anthranilate synthase component I and II compare
Atu4053 -2.3 -1.4 succinoglycan biosynthesis protein compare
Atu1644 -2.3 -3.0 hypothetical protein compare
Atu2036 -2.3 -11.1 acetolactate synthase III, large subunit compare
Atu1803 -2.3 -5.1 cold shock protein compare
Atu1645 -2.3 -7.4 ABC transporter, substrate binding protein compare
Atu3469 -2.2 -3.5 phosphoglyceromutase compare
Atu4792 -2.2 -2.0 hypothetical protein compare
Atu0331 -2.2 -2.9 sigma-54 modulation protein compare
Atu0912 -2.1 -0.7 Na+/H+ antiporter compare
Atu0434 -2.1 -1.3 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu4610 -2.1 -7.8 sugar nucleotide epimerase/dehydratase compare
Atu0030 -2.1 -1.4 phosphocarrier protein HPr compare
Atu1076 -2.1 -3.6 colicin V production protein compare
Atu1754 -2.1 -2.2 hypothetical protein compare
Atu2207 -2.0 -2.7 two component sensor kinase compare
Atu0361 -2.0 -2.6 transcriptional regulator compare
Atu2584 -2.0 -5.8 hypothetical protein compare
Atu0533 -2.0 -3.2 putative inhibitor of septum formation compare
Atu1103 -2.0 -2.8 rRNA-adenine N6,N6-dimethyltransferase compare
Atu2832 -2.0 -3.3 tRNA modification GTPase compare
Atu2193 -1.9 -0.9 hypothetical protein compare
Atu1327 -1.9 -1.5 NADH-ubiquinone oxidoreductase compare
Atu4711 -1.9 -4.4 two component sensor kinase compare
Atu0050 -1.9 -4.5 two component response regulator compare
Atu2824 -1.9 -5.1 hypothetical protein compare
Atu8029 -1.8 -1.4 hypothetical protein compare
Atu2217 -1.8 -4.4 hypothetical protein compare
Atu0029 -1.8 -5.2 S-adenosylhomocysteine hydrolase compare
Atu0499 -1.8 -4.6 hypothetical protein compare
Atu3634 -1.8 -2.8 penicillin-binding protein dacf precursor compare
Atu0925 -1.8 -3.8 hypothetical protein compare
Atu3219 -1.8 -7.0 dihydroxy-acid dehydratase compare
Atu3697 -1.8 -3.1 ATP-dependent protease LA 2 compare
Atu1902 -1.8 -3.8 transketolase compare
Atu2821 -1.8 -3.9 transcriptional regulator, GntR family compare
Atu2554 -1.8 -2.1 lysyl-tRNA synthetase compare
Atu0099 -1.8 -7.0 prephenate dehydratase compare
Atu8056 -1.8 -1.0 hypothetical protein compare
Atu8095 -1.7 -4.4 hypothetical protein compare
Atu2662 -1.7 -1.2 acetyltransferase compare
Atu0926 -1.7 -5.6 hypothetical protein compare
Atu2583 -1.7 -10.0 glycosyltransferase compare
Atu4200 -1.7 -3.6 hypothetical protein compare
Atu2592 -1.7 -7.2 hypothetical protein compare
Atu2640 -1.6 -3.3 hypothetical protein compare
Atu3763 -1.6 -0.8 hypothetical protein compare
Atu3613 -1.6 -4.4 hypothetical protein compare
Atu2582 -1.6 -5.8 UDP-glucose/GDP-mannose dehydrogenase compare
Atu1354 -1.6 -0.7 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase compare
Atu2274 -1.6 -6.2 cation efflux system protein compare
Atu0354 -1.6 -2.1 ferric uptake regulator compare
Atu2125 -1.6 -1.5 ABC transporter, nucleotide binding/ATPase protein compare
Atu1205 -1.6 -6.4 threonine dehydratase compare
Atu0025 -1.6 -2.3 hypothetical protein compare
Atu3018 -1.6 -3.4 hypothetical protein compare
Atu2555 -1.6 -3.3 L-lysine 2,3-aminomutase compare
Atu2746 -1.6 -2.2 hypothetical protein compare
Atu4149 -1.6 -9.5 UDP-glucose 6-dehydrogenase compare
Atu4148 -1.6 -4.6 UDP-glucuronic acid epimerase compare
Atu3910 -1.6 -2.4 LamB/YcsF family protein compare
Atu5125 -1.6 -3.4 GntR family transcriptional regulator compare
Atu2245 -1.6 -6.2 Na+/Pi-cotransporter compare
Atu0269 -1.5 -3.6 exodeoxyribonuclease VII large subunit compare
Atu2192 -1.5 -1.1 hypothetical protein compare
Atu2790 -1.5 -1.5 3-isopropylmalate dehydratase, small subunit compare
Atu3739 -1.5 -1.4 phosphoglycerate kinase compare
Atu1099 -1.5 -5.9 hypothetical protein compare
Atu2577 -1.5 -10.7 ABC transporter, nucleotide binding/ATPase protein compare
Atu1683 -1.5 -1.8 hypothetical protein compare
Atu1687 -1.5 -6.2 anthranilate phosphoribosyltransferase compare
Atu4893 -1.5 -4.3 hypothetical protein compare
Atu1793 -1.5 -6.9 phosphatidylcholine synthase compare
Atu0723 -1.5 -1.4 FAD dependent oxidoreductase compare
Atu4514 -1.5 -1.7 RpiR family transcriptional regulator compare
Atu1619 -1.5 -2.4 protein-export membrane protein SECG compare
Atu4502 -1.5 -4.9 cobalamin synthesis protein compare
Atu3755 -1.5 -3.3 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu4892 -1.4 -8.3 hypothetical protein compare
Atu2590 -1.4 -7.1 hypothetical protein compare
Atu2442 -1.4 -2.1 hypothetical protein compare
Atu1760 -1.4 -1.1 hypothetical protein compare
Atu2796 -1.4 -4.4 precorrin-4 C11-methyltransferase compare
Atu2591 -1.4 -7.2 glucosyltransferase compare
Atu1439 -1.4 -1.1 hypothetical protein compare
Atu1677 -1.4 -2.3 queuine tRNA-ribosyltransferase compare
Atu0498 -1.4 -4.2 hypothetical protein compare
Atu1028 -1.4 -1.5 hypothetical protein compare
Atu0784 -1.4 -1.4 hypothetical protein compare
Atu1688 -1.4 -4.3 indole-3-glycerol-phosphate synthase compare
Atu2200 -1.4 -1.8 cold shock protein compare
Atu5045 -1.4 -1.6 hypothetical protein compare
Atu4609 -1.4 -5.4 glycosyltransferase compare
Atu4608 -1.4 -6.4 hypothetical protein compare
Atu0163 -1.4 -3.3 tonB protein compare
Atu5114 -1.4 -3.0 hypothetical protein compare
Atu1285 -1.3 -4.6 metal dependent hydrolase compare
Atu2801 -1.3 -3.3 precorrin-2 C20 methyltransferase compare
Atu0995 -1.3 -4.9 hypothetical protein compare
Atu0923 -1.3 -3.0 hypothetical protein compare
Atu1874 -1.3 -2.6 RecA protein compare
Atu0153 -1.3 -3.2 transcriptional regulator, Fur family compare
Atu1495 -1.3 -2.3 hypothetical protein compare
Atu1705 -1.3 -4.2 SEC-independent protein translocase protein compare
Atu3006 -1.3 -3.8 hypothetical protein compare
Atu0017 -1.3 -2.3 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu4888 -1.3 -3.6 hypothetical protein compare
Atu1447 -1.2 -1.6 two component sensor kinase compare
Atu2372 -1.2 -4.8 UDP-hexose transferase compare
Atu1667 -1.2 -1.2 hypothetical protein compare
Atu1300 -1.2 -4.4 MFS permease compare
Atu0086 -1.2 -0.6 ribosome-binding factor A compare
Atu0375 -1.2 -1.6 small heat shock protein compare
Atu3698 -1.2 -3.0 thioredoxin compare
Atu4117 -1.2 -2.4 dipeptide ABC transporter ATPase compare
Atu1364 -1.2 -3.7 ATP-dependent Clp protease, ATP-binding subunit compare
Atu2234 -1.2 -1.4 hypothetical protein compare
Atu1774 -1.2 -2.8 ABC transporter, substrate binding protein (peptide) compare
Atu0479 -1.2 -3.5 ABC transporter, substrate binding protein (amino acid) compare
Atu1714 -1.2 -1.1 exonuclease III compare
Atu4589 -1.2 -1.9 transmembrane transport protein compare
Atu8130 -1.2 -3.8 hypothetical protein compare
Atu3603 -1.2 -1.6 two component response regulator compare
Atu0836 -1.2 -2.0 Glutathione-S-transferase compare
Atu0427 -1.2 -2.4 hypothetical protein compare
Atu3466 -1.2 -1.7 ArsR family transcriptional regulator compare
Atu1904 -1.2 -1.9 transcriptional regulator compare
Atu4161 -1.2 -1.0 hypothetical protein compare
Atu1213 -1.1 -1.0 hypothetical protein compare
Atu1056 -1.1 -3.7 hypothetical protein compare
Atu3010 -1.1 -5.4 hypothetical protein compare
Atu2798 -1.1 -2.2 precorrin-6y methyltransferase compare
Atu1238 -1.1 -3.9 polysaccharide export protein compare
Atu3732 -1.1 -4.8 hemolysin compare
Atu8087 -1.1 -0.7 putative peptidoglycan binding protein compare


Specific Phenotypes

For 1 genes in this experiment

For in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days in Agrobacterium fabrum C58

For in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days across organisms