Experiment set15IT022 for Agrobacterium fabrum C58

Compare to:

Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days

200 most important genes:

  gene name fitness t score description  
Atu3544 -6.8 -11.4 arsenical pump membrane protein compare
Atu4614 -6.6 -4.6 glycosyltransferase compare
Atu2183 -6.5 -4.5 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu3353 -6.3 -4.4 mannose-1-phosphate guanylyltransferase compare
Atu2522 -6.3 -14.7 agrobacterium chromosomal virulence protein B compare
Atu0978 -6.0 -8.3 two component response regulator compare
Atu4618 -6.0 -11.6 dTDP-rhamnose-3,5-epimerase compare
Atu0043 -5.8 -3.0 imidazoleglycerol-phosphate dehydratase compare
Atu1644 -5.7 -3.5 hypothetical protein compare
Atu0030 -5.7 -1.3 phosphocarrier protein HPr compare
Atu4613 -5.6 -13.8 glycosyltransferase compare
Atu2379 -5.6 -7.7 phosphomannomutase compare
Atu4615 -5.6 -9.3 glucose-1-phosphate thymidylyltransferase compare
Atu3311 -5.5 -13.6 phosphomannose isomerase compare
Atu4617 -5.5 -7.6 dTDP-D-glucose-4,6-dehydratase compare
Atu1021 -5.3 -2.5 outer membrane protein compare
Atu0039 -5.3 -2.4 imidazoleglycerol-phosphate synthase cyclase compare
Atu0038 -5.3 -4.8 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu2125 -5.0 -2.0 ABC transporter, nucleotide binding/ATPase protein compare
Atu0537 -5.0 -6.8 histidinol dehydrogenase compare
Atu0602 -5.0 -9.9 glutamine synthetase compare
Atu0659 -4.9 -6.7 NTP pyrophosphohydrolase, MutT family compare
Atu4166 -4.9 -1.6 UDP-glucose 4-epimerase compare
Atu0421 -4.8 -1.1 ABC transporter, membrane spanning protein compare
Atu0977 -4.6 -4.8 serine protease DO-like protease compare
Atu0679 -4.6 -5.8 ATP phosphoribosyltransferase compare
Atu3598 -4.6 -1.9 thiol:disulfide interchange protein compare
Atu2684 -4.5 -1.8 hypothetical protein compare
Atu1030 -4.5 -1.8 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu4616 -4.4 -1.8 dTDP-4-dehydrorhamnose reductase compare
Atu1359 -4.2 -1.0 dnaK deletion suppressor protein compare
Atu0422 -3.9 -1.6 ABC transporter, membrane spanning protein compare
Atu0601 -3.9 -9.4 oxidoreductase compare
Atu0678 -3.9 -5.7 histidyl-tRNA synthetase compare
Atu1750 -3.9 -2.3 phosphoribosyl c-AMP cyclohydrolase compare
Atu1645 -3.8 -9.1 ABC transporter, substrate binding protein compare
Atu2728 -3.8 -2.6 beta (1-->2) glucan export ATP-binding protein compare
Atu4514 -3.7 -4.9 RpiR family transcriptional regulator compare
Atu0040 -3.7 -1.2 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu0876 -3.6 -1.8 superoxide dismutase compare
Atu4610 -3.4 -12.0 sugar nucleotide epimerase/dehydratase compare
Atu0979 -3.4 -7.7 two component sensor kinase compare
Atu1904 -3.4 -6.1 transcriptional regulator compare
Atu4317 -3.4 -2.2 TetR family transcriptional regulator compare
Atu0041 -3.4 -2.9 glutamine amidotransferase compare
Atu0999 -3.4 -2.3 magnesium transport protein compare
Atu0971 -3.4 -4.7 two component sensor kinase compare
Atu1470 -3.3 -1.1 Camphor resistance protein compare
Atu2200 -3.3 -2.5 cold shock protein compare
Atu2831 -3.3 -4.9 glucose inhibited division protein A compare
Atu8054 -3.2 -1.1 hypothetical protein compare
Atu0017 -3.2 -2.8 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu2040 -3.2 -6.0 phosphoserine phosphatase compare
Atu6098 -3.1 -1.0 transcriptional regulator, HTH family compare
Atu3707 -3.1 -2.8 phosphoserine aminotransferase compare
Atu1646 -3.0 -3.8 ABC transporter, nucleotide binding/ATPase protein compare
Atu0153 -3.0 -3.8 transcriptional regulator, Fur family compare
Atu3706 -3.0 -7.0 D-3-phosphoglycerate dehydrogenase compare
Atu0368 -3.0 -5.0 tRNA pseudouridine synthase I compare
Atu0331 -3.0 -3.2 sigma-54 modulation protein compare
Atu2057 -2.9 -3.1 DNA helicase II compare
Atu0225 -2.9 -1.0 hypothetical protein compare
Atu1163 -2.8 -1.6 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu0086 -2.8 -0.9 ribosome-binding factor A compare
Atu3885 -2.7 -7.2 inositol monophosphatase compare
Atu2521 -2.7 -13.1 Protein regulated by acid pH compare
Atu3908 -2.7 -10.2 GntR family transcriptional regulator compare
Atu0188 -2.7 -2.8 ABC transporter, membrane spanning protein (peptide) compare
Atu3469 -2.7 -3.3 phosphoglyceromutase compare
Atu0189 -2.6 -1.4 ABC transporter, membrane spanning protein (peptide) compare
Atu2289 -2.6 -11.4 anthranilate synthase component I and II compare
Atu1677 -2.6 -3.1 queuine tRNA-ribosyltransferase compare
Atu2832 -2.6 -4.1 tRNA modification GTPase compare
Atu2554 -2.5 -2.3 lysyl-tRNA synthetase compare
Atu3727 -2.5 -4.1 hypothetical protein compare
Atu1327 -2.4 -2.2 NADH-ubiquinone oxidoreductase compare
Atu8095 -2.4 -6.0 hypothetical protein compare
Atu0769 -2.3 -1.1 protoheme IX farnesyltransferase compare
Atu2274 -2.3 -7.9 cation efflux system protein compare
Atu2821 -2.3 -2.6 transcriptional regulator, GntR family compare
Atu0995 -2.2 -7.4 hypothetical protein compare
Atu2052 -2.2 -5.9 hypothetical protein compare
Atu0099 -2.2 -8.1 prephenate dehydratase compare
Atu1902 -2.2 -4.5 transketolase compare
Atu4609 -2.1 -8.8 glycosyltransferase compare
Atu3739 -2.1 -2.9 phosphoglycerate kinase compare
Atu0912 -2.1 -0.7 Na+/H+ antiporter compare
Atu3012 -2.1 -2.1 hypothetical protein compare
Atu2036 -2.1 -8.6 acetolactate synthase III, large subunit compare
Atu1619 -2.0 -2.0 protein-export membrane protein SECG compare
Atu5125 -2.0 -4.8 GntR family transcriptional regulator compare
Atu0272 -2.0 -3.3 transcriptional regulator, MarR family compare
Atu0687 -2.0 -1.3 hypothetical protein compare
Atu0115 -2.0 -0.9 hypothetical protein compare
Atu1705 -2.0 -4.5 SEC-independent protein translocase protein compare
Atu2798 -2.0 -2.5 precorrin-6y methyltransferase compare
Atu1588 -2.0 -7.0 homoserine dehydrogenase compare
Atu1495 -1.9 -2.9 hypothetical protein compare
Atu1810 -1.9 -0.9 hypothetical protein compare
Atu2017 -1.9 -1.0 hypothetical protein compare
Atu4149 -1.9 -8.8 UDP-glucose 6-dehydrogenase compare
Atu1647 -1.9 -3.7 ABC transporter, membrane spanning protein compare
Atu1687 -1.9 -4.7 anthranilate phosphoribosyltransferase compare
Atu1103 -1.9 -2.6 rRNA-adenine N6,N6-dimethyltransferase compare
Atu0029 -1.9 -3.5 S-adenosylhomocysteine hydrolase compare
Atu2585 -1.8 -5.7 hypothetical protein compare
Atu1774 -1.8 -4.5 ABC transporter, substrate binding protein (peptide) compare
Atu1513 -1.7 -3.9 ABC excinuclease subunit A compare
Atu4608 -1.7 -7.7 hypothetical protein compare
Atu4148 -1.7 -7.6 UDP-glucuronic acid epimerase compare
Atu0499 -1.7 -5.9 hypothetical protein compare
Atu2677 -1.7 -2.2 protein tyrosine phosphatase compare
Atu0846 -1.7 -3.6 transcriptional regulator, MarR family compare
Atu3613 -1.7 -6.0 hypothetical protein compare
Atu3733 -1.7 -1.9 hypothetical protein compare
Atu8096 -1.7 -1.4 hypothetical protein compare
Atu4711 -1.6 -4.7 two component sensor kinase compare
Atu3730 -1.6 -1.1 hypothetical protein compare
Atu1688 -1.6 -3.9 indole-3-glycerol-phosphate synthase compare
Atu0190 -1.6 -3.4 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu3798 -1.6 -2.7 TetR family transcriptional regulator compare
Atu1354 -1.6 -0.9 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase compare
Atu2640 -1.6 -3.3 hypothetical protein compare
Atu1056 -1.6 -4.8 hypothetical protein compare
Atu3732 -1.6 -7.6 hemolysin compare
Atu3763 -1.6 -0.7 hypothetical protein compare
Atu1803 -1.5 -4.8 cold shock protein compare
Atu1891 -1.5 -1.8 cobalamin biosynthesis protein compare
Atu2577 -1.5 -11.1 ABC transporter, nucleotide binding/ATPase protein compare
Atu2799 -1.5 -3.2 precorrin-6x reductase compare
Atu1793 -1.5 -4.5 phosphatidylcholine synthase compare
Atu2583 -1.5 -7.9 glycosyltransferase compare
Atu2590 -1.5 -7.6 hypothetical protein compare
Atu0784 -1.5 -2.0 hypothetical protein compare
Atu3910 -1.5 -2.6 LamB/YcsF family protein compare
Atu3219 -1.4 -5.1 dihydroxy-acid dehydratase compare
Atu1683 -1.4 -1.9 hypothetical protein compare
Atu2592 -1.4 -5.6 hypothetical protein compare
Atu4505 -1.4 -4.0 LacI family transcriptional regulator compare
Atu8130 -1.4 -4.5 hypothetical protein compare
Atu2746 -1.4 -2.8 hypothetical protein compare
Atu2083 -1.4 -2.3 DNA repair protein RecN compare
Atu0953 -1.4 -0.9 hypothetical protein compare
Atu2584 -1.4 -4.7 hypothetical protein compare
Atu2800 -1.4 -2.5 precorrin-3B C17-methyltransferase compare
Atu3697 -1.4 -2.2 ATP-dependent protease LA 2 compare
Atu4502 -1.4 -4.2 cobalamin synthesis protein compare
Atu4323 -1.4 -3.7 ribitol 2-dehydrogenase compare
Atu0434 -1.4 -0.9 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu1566 -1.4 -0.7 hypothetical protein compare
Atu5007 -1.3 -4.7 santhopine-responsive transcriptional repressor compare
Atu0036 -1.3 -1.9 hypothetical protein compare
Atu1286 -1.3 -2.9 hypothetical protein compare
Atu1447 -1.3 -1.4 two component sensor kinase compare
Atu2582 -1.3 -6.2 UDP-glucose/GDP-mannose dehydrogenase compare
Atu2532 -1.3 -3.0 transcriptional regulator, MarR family compare
Atu2730 -1.3 -7.3 beta (1-->2) glucan biosynthesis protein compare
Atu3623 -1.3 -3.3 DnaJ family molecular chaperone compare
Atu0388 -1.3 -5.6 two component sensor kinase compare
Atu5468 -1.3 -1.5 hypothetical protein compare
Atu3773 -1.3 -1.6 hypothetical protein compare
Atu1573 -1.3 -1.1 hypothetical protein compare
Atu3779 -1.3 -4.7 lytic murein transglycosylase compare
Atu3274 -1.3 -7.3 AcrB/AcrD/AcrF family protein compare
Atu3387 -1.2 -1.8 sigma factor compare
Atu1417 -1.2 -5.0 enoyl-CoA hydratase compare
Atu4892 -1.2 -7.0 hypothetical protein compare
Atu1300 -1.2 -5.4 MFS permease compare
Atu1356 -1.2 -4.5 hypothetical protein compare
Atu0050 -1.2 -3.0 two component response regulator compare
Atu4882 -1.2 -1.4 hypothetical protein compare
Atu3777 -1.2 -6.1 hypothetical protein compare
Atu0142 -1.2 -1.4 cytochrome o ubiquinol oxidase subunit II compare
Atu1076 -1.2 -2.1 colicin V production protein compare
Atu0636 -1.2 -5.2 hypothetical protein compare
Atu1484 -1.2 -3.4 transcriptional regulator compare
Atu2237 -1.2 -2.3 cytochrome c1 compare
Atu8053 -1.2 -1.4 hypothetical protein compare
Atu1971 -1.2 -2.4 hypothetical protein compare
Atu0498 -1.2 -4.3 hypothetical protein compare
Atu4187 -1.2 -0.9 tRNA-Met compare
Atu4635 -1.2 -2.8 hypothetical protein compare
Atu1466 -1.2 -1.0 hypothetical protein compare
Atu1880 -1.2 -2.9 ABC transporter, membrane spanning protein (amino acid) compare
Atu4075 -1.2 -4.0 glycogen synthase compare
Atu1333 -1.2 -2.0 outer membrane protein compare
Atu2814 -1.2 -4.9 zinc-binding dehydrogenase compare
Atu3963 -1.2 -4.1 GntR family transcriptional regulator compare
Atu4889 -1.1 -4.0 hypothetical protein compare
Atu0925 -1.1 -2.4 hypothetical protein compare
Atu1285 -1.1 -4.0 metal dependent hydrolase compare
Atu0890 -1.1 -2.3 hypothetical protein compare
Atu4040 -1.1 -1.2 hypothetical protein compare
Atu4873 -1.1 -2.9 TetR family transcriptional regulator compare
Atu0502 -1.1 -3.5 acetyl-CoA acetyltransferase compare
Atu1242 -1.1 -3.6 cytochrome oxidase assembly factor compare
Atu2207 -1.1 -2.1 two component sensor kinase compare
Atu4753 -1.1 -2.9 amino acid ABC transporter permease compare
Atu2245 -1.1 -4.6 Na+/Pi-cotransporter compare
Atu4160 -1.1 -3.8 RNA polymerase sigma factor compare


Specific Phenotypes

For 10 genes in this experiment

For in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days in Agrobacterium fabrum C58

For in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days across organisms