Experiment set15IT020 for Agrobacterium fabrum C58

Compare to:

Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days

200 most important genes:

  gene name fitness t score description  
Atu3544 -7.7 -5.3 arsenical pump membrane protein compare
Atu2183 -6.4 -6.2 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu3353 -5.9 -7.1 mannose-1-phosphate guanylyltransferase compare
Atu4617 -5.6 -11.4 dTDP-D-glucose-4,6-dehydratase compare
Atu0602 -5.6 -9.3 glutamine synthetase compare
Atu3311 -5.6 -11.1 phosphomannose isomerase compare
Atu4614 -5.4 -8.3 glycosyltransferase compare
Atu4615 -5.4 -9.0 glucose-1-phosphate thymidylyltransferase compare
Atu2522 -5.4 -15.4 agrobacterium chromosomal virulence protein B compare
Atu2125 -5.2 -2.5 ABC transporter, nucleotide binding/ATPase protein compare
Atu4613 -4.9 -11.4 glycosyltransferase compare
Atu0421 -4.9 -1.4 ABC transporter, membrane spanning protein compare
Atu4166 -4.8 -2.0 UDP-glucose 4-epimerase compare
Atu0659 -4.7 -7.2 NTP pyrophosphohydrolase, MutT family compare
Atu0039 -4.7 -3.8 imidazoleglycerol-phosphate synthase cyclase compare
Atu2684 -4.7 -2.3 hypothetical protein compare
Atu4616 -4.4 -2.2 dTDP-4-dehydrorhamnose reductase compare
Atu4618 -4.4 -12.4 dTDP-rhamnose-3,5-epimerase compare
Atu1359 -4.2 -1.2 dnaK deletion suppressor protein compare
Atu0537 -4.1 -9.2 histidinol dehydrogenase compare
Atu0422 -4.1 -2.0 ABC transporter, membrane spanning protein compare
Atu2585 -4.1 -8.9 hypothetical protein compare
Atu2583 -4.1 -19.4 glycosyltransferase compare
Atu0041 -3.9 -3.6 glutamine amidotransferase compare
Atu4609 -3.9 -15.0 glycosyltransferase compare
Atu4149 -3.9 -15.5 UDP-glucose 6-dehydrogenase compare
Atu2728 -3.7 -3.6 beta (1-->2) glucan export ATP-binding protein compare
Atu2584 -3.7 -11.2 hypothetical protein compare
Atu2592 -3.7 -11.1 hypothetical protein compare
Atu0188 -3.7 -3.5 ABC transporter, membrane spanning protein (peptide) compare
Atu2590 -3.6 -12.4 hypothetical protein compare
Atu1644 -3.6 -4.1 hypothetical protein compare
Atu0679 -3.6 -7.2 ATP phosphoribosyltransferase compare
Atu4610 -3.5 -11.2 sugar nucleotide epimerase/dehydratase compare
Atu0678 -3.5 -7.5 histidyl-tRNA synthetase compare
Atu0999 -3.5 -2.4 magnesium transport protein compare
Atu2591 -3.4 -11.6 glucosyltransferase compare
Atu1030 -3.4 -1.9 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu4148 -3.3 -10.9 UDP-glucuronic acid epimerase compare
Atu0601 -3.3 -10.0 oxidoreductase compare
Atu4608 -3.3 -9.2 hypothetical protein compare
Atu0434 -3.2 -2.1 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu6098 -3.1 -1.3 transcriptional regulator, HTH family compare
Atu0971 -3.1 -5.1 two component sensor kinase compare
Atu1750 -3.1 -5.3 phosphoribosyl c-AMP cyclohydrolase compare
Atu0030 -3.1 -1.8 phosphocarrier protein HPr compare
Atu2577 -3.0 -19.6 ABC transporter, nucleotide binding/ATPase protein compare
Atu0040 -2.9 -1.7 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu0086 -2.9 -1.2 ribosome-binding factor A compare
Atu0038 -2.9 -4.9 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu8095 -2.9 -8.3 hypothetical protein compare
Atu1417 -2.9 -6.7 enoyl-CoA hydratase compare
Atu2582 -2.9 -9.7 UDP-glucose/GDP-mannose dehydrogenase compare
Atu3727 -2.9 -4.5 hypothetical protein compare
Atu1810 -2.8 -1.1 hypothetical protein compare
Atu1354 -2.8 -1.1 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase compare
Atu0153 -2.7 -4.4 transcriptional regulator, Fur family compare
Atu2379 -2.6 -7.8 phosphomannomutase compare
Atu1646 -2.6 -4.8 ABC transporter, nucleotide binding/ATPase protein compare
Atu2057 -2.6 -3.4 DNA helicase II compare
Atu2040 -2.5 -6.7 phosphoserine phosphatase compare
Atu1645 -2.5 -5.4 ABC transporter, substrate binding protein compare
Atu0769 -2.5 -1.4 protoheme IX farnesyltransferase compare
Atu1503 -2.5 -1.4 hypothetical protein compare
Atu2439 -2.5 -1.4 hypothetical protein compare
Atu0368 -2.4 -5.3 tRNA pseudouridine synthase I compare
Atu1327 -2.4 -2.7 NADH-ubiquinone oxidoreductase compare
Atu3908 -2.3 -11.2 GntR family transcriptional regulator compare
Atu2207 -2.3 -4.0 two component sensor kinase compare
Atu4711 -2.3 -4.6 two component sensor kinase compare
Atu4317 -2.3 -2.7 TetR family transcriptional regulator compare
Atu0876 -2.2 -1.7 superoxide dismutase compare
Atu2831 -2.2 -4.5 glucose inhibited division protein A compare
Atu8191 -2.2 -1.9 hypothetical protein compare
Atu0912 -2.2 -0.8 Na+/H+ antiporter compare
Atu5007 -2.1 -6.1 santhopine-responsive transcriptional repressor compare
Atu0142 -2.1 -2.8 cytochrome o ubiquinol oxidase subunit II compare
Atu1904 -2.1 -3.0 transcriptional regulator compare
Atu1647 -2.0 -6.2 ABC transporter, membrane spanning protein compare
Atu2289 -2.0 -10.0 anthranilate synthase component I and II compare
Atu2832 -1.9 -4.1 tRNA modification GTPase compare
Atu1902 -1.9 -4.9 transketolase compare
Atu1219 -1.9 -1.1 hypothetical protein compare
Atu0978 -1.9 -3.9 two component response regulator compare
Atu1163 -1.9 -1.6 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu2554 -1.9 -1.9 lysyl-tRNA synthetase compare
Atu3706 -1.9 -6.6 D-3-phosphoglycerate dehydrogenase compare
Atu3598 -1.9 -1.1 thiol:disulfide interchange protein compare
Atu1688 -1.9 -6.4 indole-3-glycerol-phosphate synthase compare
Atu2036 -1.9 -9.7 acetolactate synthase III, large subunit compare
Atu1141 -1.8 -3.9 Phosphoribosylglycinamide synthetase compare
Atu3012 -1.8 -2.0 hypothetical protein compare
Atu0017 -1.8 -2.8 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu0043 -1.8 -2.1 imidazoleglycerol-phosphate dehydratase compare
Atu0099 -1.8 -6.4 prephenate dehydratase compare
Atu3763 -1.8 -1.0 hypothetical protein compare
Atu4055 -1.7 -4.1 endo-1,3-1,4-beta-glycanase compare
Atu1076 -1.7 -2.8 colicin V production protein compare
Atu0026 -1.7 -1.1 hypothetical protein compare
Atu0647 -1.7 -5.3 phosphoribosylamine--glycine ligase compare
Atu0050 -1.7 -4.6 two component response regulator compare
Atu1140 -1.7 -2.6 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu0141 -1.7 -1.6 cytochrome O ubiquinol oxidase subunit I compare
Atu2718 -1.7 -6.6 homoserine O-succinyltransferase compare
Atu8162 -1.7 -1.4 hypothetical protein compare
Atu4217 -1.6 -1.3 TetR family transcriptional regulator compare
Atu1803 -1.6 -4.7 cold shock protein compare
Atu0784 -1.5 -2.4 hypothetical protein compare
Atu2192 -1.5 -1.3 hypothetical protein compare
Atu1364 -1.5 -5.6 ATP-dependent Clp protease, ATP-binding subunit compare
Atu2532 -1.5 -4.2 transcriptional regulator, MarR family compare
Atu0533 -1.5 -2.9 putative inhibitor of septum formation compare
Atu3707 -1.5 -1.9 phosphoserine aminotransferase compare
Atu5114 -1.5 -4.1 hypothetical protein compare
Atu1874 -1.5 -2.7 RecA protein compare
Atu3468 -1.5 -0.7 hypothetical protein compare
Atu0432 -1.4 -6.9 O-succinylhomoserine sulfhydrylase compare
Atu0499 -1.4 -4.9 hypothetical protein compare
Atu2296 -1.4 -3.4 2-dehydro-3-deoxygluconokinase compare
Atu5142 -1.4 -1.4 hypothetical protein compare
Atu5125 -1.4 -3.5 GntR family transcriptional regulator compare
Atu0726 -1.4 -7.1 ring hydroxylating dioxygenase, alpha-subunit compare
Atu2821 -1.4 -4.2 transcriptional regulator, GntR family compare
Atu3733 -1.4 -2.6 hypothetical protein compare
Atu1056 -1.3 -3.4 hypothetical protein compare
Atu0051 -1.3 -4.6 two component sensor kinase compare
Atu1705 -1.3 -3.4 SEC-independent protein translocase protein compare
Atu0723 -1.3 -1.6 FAD dependent oxidoreductase compare
Atu6131 -1.3 -5.3 TraR Antiactivator compare
Atu0977 -1.3 -3.0 serine protease DO-like protease compare
Atu8118 -1.3 -4.3 putative universal stress protein compare
Atu4502 -1.3 -5.1 cobalamin synthesis protein compare
Atu0979 -1.3 -4.4 two component sensor kinase compare
Atu0190 -1.3 -3.3 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu3001 -1.2 -2.0 hypothetical protein compare
Atu0690 -1.2 -1.9 hypothetical protein compare
Atu1129 -1.2 -5.6 excinuclease ABC chain C compare
Atu4635 -1.2 -3.3 hypothetical protein compare
Atu1103 -1.2 -2.0 rRNA-adenine N6,N6-dimethyltransferase compare
Atu1774 -1.2 -3.1 ABC transporter, substrate binding protein (peptide) compare
Atu3407 -1.2 -5.8 hypothetical protein compare
Atu1422 -1.2 -4.1 transcriptional regulator, MarR family compare
Atu3517 -1.2 -2.7 acetyltransferase compare
Atu3730 -1.2 -1.2 hypothetical protein compare
Atu3739 -1.2 -2.8 phosphoglycerate kinase compare
Atu3017 -1.2 -1.0 phosphoglyceromutase compare
Atu1739 -1.2 -3.0 permease compare
Atu3613 -1.2 -3.3 hypothetical protein compare
Atu0331 -1.2 -2.3 sigma-54 modulation protein compare
Atu1495 -1.2 -2.4 hypothetical protein compare
Atu4873 -1.2 -4.8 TetR family transcriptional regulator compare
Atu2640 -1.2 -3.3 hypothetical protein compare
Atu1205 -1.2 -6.1 threonine dehydratase compare
Atu3018 -1.1 -4.2 hypothetical protein compare
Atu2790 -1.1 -1.3 3-isopropylmalate dehydratase, small subunit compare
Atu1678 -1.1 -3.2 S-adenosylmethionine tRNA ribosyltransferase-isomerase compare
Atu1470 -1.1 -0.8 Camphor resistance protein compare
Atu2709 -1.1 -7.0 3-isopropylmalate dehydratase, large subunit compare
Atu1850 -1.1 -1.5 phosphoribosylformylglycinamidine synthetase II compare
Atu4889 -1.1 -2.5 hypothetical protein compare
Atu2614 -1.1 -4.1 hypothetical protein compare
Atu0062 -1.1 -5.1 transcriptional regulator, ROK family compare
Atu2824 -1.1 -2.8 hypothetical protein compare
Atu2662 -1.1 -1.1 acetyltransferase compare
Atu2245 -1.1 -5.7 Na+/Pi-cotransporter compare
Atu2685 -1.1 -5.0 aconitate hydratase compare
Atu1285 -1.1 -3.5 metal dependent hydrolase compare
Atu0357 -1.1 -4.5 phosphate starvation inducible protein compare
Atu2113 -1.0 -2.5 N-acetylmuramoyl-L-alanine amidase compare
Atu6189 -1.0 -0.7 protein secretion chaperone compare
Atu1546 -1.0 -2.7 transcriptional regulator, MerR family compare
Atu0388 -1.0 -5.6 two component sensor kinase compare
Atu0837 -1.0 -2.9 transcriptional regulator, MarR family compare
Atu3963 -1.0 -3.6 GntR family transcriptional regulator compare
Atu4050 -1.0 -2.1 UTP-glucose-1-phosphate uridylyltransferase compare
Atu4505 -1.0 -3.7 LacI family transcriptional regulator compare
Atu1021 -1.0 -1.1 outer membrane protein compare
Atu0025 -1.0 -2.1 hypothetical protein compare
Atu1588 -1.0 -4.0 homoserine dehydrogenase compare
Atu1204 -1.0 -3.7 potassium uptake protein compare
Atu3010 -1.0 -4.7 hypothetical protein compare
Atu1687 -1.0 -4.6 anthranilate phosphoribosyltransferase compare
Atu2791 -1.0 -4.4 3-isopropylmalate dehydrogenase compare
Atu0361 -1.0 -1.9 transcriptional regulator compare
Atu1845 -1.0 -2.3 phosphoribosylformylglycinamidine synthase I compare
Atu2264 -1.0 -4.7 2-isopropylmalate synthase compare
Atu2796 -1.0 -4.1 precorrin-4 C11-methyltransferase compare
Atu1760 -1.0 -1.0 hypothetical protein compare
Atu4773 -1.0 -1.2 two component response regulator compare
Atu4160 -1.0 -3.5 RNA polymerase sigma factor compare
Atu3634 -1.0 -1.8 penicillin-binding protein dacf precursor compare
Atu3011 -1.0 -2.2 ArsR family transcriptional regulator compare
Atu2020 -1.0 -2.0 transcriptional regulator, TetR family compare
Atu2730 -1.0 -6.1 beta (1-->2) glucan biosynthesis protein compare
Atu4893 -1.0 -4.0 hypothetical protein compare
Atu3013 -1.0 -2.5 hypothetical protein compare
Atu0925 -1.0 -2.3 hypothetical protein compare
Atu5160 -0.9 -2.0 transcriptional regulator protein compare
Atu1099 -0.9 -2.7 hypothetical protein compare
Atu1052 -0.9 -1.7 hypothetical protein compare


Specific Phenotypes

For 3 genes in this experiment

For in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days in Agrobacterium fabrum C58

For in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days across organisms