Experiment set15IT020 for Agrobacterium fabrum C58

Compare to:

Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days

200 most detrimental genes:

  gene name fitness t score description  
Atu6036 +1.5 1.3 entry-exclusion protein compare
Atu2462 +1.4 0.9 hypothetical protein compare
Atu0888 +1.2 5.6 transcriptional regulator, MerR family compare
Atu8018 +1.2 1.2 hypothetical protein compare
Atu1223 +1.2 1.9 hypothetical protein compare
Atu3423 +1.1 1.2 hypothetical protein compare
Atu2163 +1.0 0.7 hypothetical protein compare
Atu1302 +1.0 1.9 hypothetical protein compare
Atu2270 +1.0 1.7 ATP-dependent Clp protease, proteolytic subunit compare
Atu3183 +1.0 0.9 hypothetical protein compare
Atu0953 +1.0 1.3 hypothetical protein compare
Atu4540 +0.9 1.7 protocatechuate 3,4-dioxygenase subunit beta compare
Atu3614 +0.9 6.6 glyoxalase II compare
Atu4053 +0.9 0.9 succinoglycan biosynthesis protein compare
Atu4034 +0.9 4.3 two component sensor kinase compare
Atu3712 +0.9 1.4 hypothetical protein compare
Atu3864 +0.9 3.8 hypothetical protein compare
Atu1149 +0.9 1.8 adenylate cyclase compare
Atu3688 +0.9 2.4 iron(III ABC transporter permease dicitrate ABC transporter permease compare
Atu3503 +0.9 1.9 ABC transporter permease compare
Atu1062 +0.8 1.7 phosphatidylserine synthase compare
Atu0488 +0.8 1.3 hypothetical protein compare
Atu0941 +0.8 0.7 hypothetical protein compare
Atu2771 +0.8 2.2 bacterioferritin compare
Atu2193 +0.8 0.9 hypothetical protein compare
Atu3064 +0.8 2.4 ABC transporter permease compare
Atu0843 +0.8 6.3 P type cation (metal) transporter, ATPase component compare
Atu1490 +0.8 1.9 arsenate reductase compare
Atu0115 +0.8 0.9 hypothetical protein compare
Atu0280 +0.8 1.0 hypothetical protein compare
Atu1444 +0.7 3.4 nitrogen regulation protein compare
Atu2063 +0.7 1.7 hypothetical protein compare
Atu0119 +0.7 1.0 hypothetical protein compare
Atu4033 +0.7 4.2 sugar ABC transporter substrate-binding protein compare
Atu1389 +0.7 1.6 ABC transporter, membrane spanning protein compare
Atu4031 +0.7 5.0 sugar ABC transporter permease compare
Atu6160 +0.7 1.1 conserved hypothetical protein compare
Atu1291 +0.7 1.5 hypothetical protein compare
Atu2271 +0.7 2.1 urease accessory protein compare
Atu3775 +0.7 1.5 hypothetical protein compare
Atu2130 +0.7 1.1 hypothetical protein compare
Atu4486 +0.7 1.9 nitroreductase compare
Atu8035 +0.7 1.2 hypothetical protein compare
Atu0485 +0.7 4.0 hypothetical protein compare
Atu2282 +0.7 1.9 thymidine kinase compare
Atu6165 +0.7 0.8 hypothetical protein compare
Atu1642 +0.7 1.5 hypothetical protein compare
Atu3647 +0.7 1.6 hypothetical protein compare
Atu5034 +0.7 0.9 hypothetical protein compare
Atu2201 +0.7 1.3 hydrolase compare
Atu0572 +0.7 1.1 hypothetical protein compare
Atu2067 +0.7 0.6 hypothetical protein compare
Atu3578 +0.7 3.2 glycerol-3-phosphate dehydrogenase compare
Atu4094 +0.7 2.5 hypothetical protein compare
Atu1344 +0.7 1.1 hypothetical protein compare
Atu2626 +0.6 2.0 hypothetical protein compare
Atu3561 +0.6 2.3 hypothetical protein compare
Atu1399 +0.6 1.6 ABC transporter, substrate binding protein (amino acid) compare
Atu4032 +0.6 3.6 sugar ABC transporter ATPase compare
Atu0095 +0.6 1.1 hypothetical protein compare
Atu0938 +0.6 1.7 transcriptional regulator, MerR family compare
Atu3610 +0.6 2.7 transporter compare
Atu3548 +0.6 2.6 glycosyltransferase compare
Atu3358 +0.6 1.4 amino acid ABC transporter permease compare
Atu3425 +0.6 2.6 hypothetical protein compare
Atu1835 +0.6 1.4 hypothetical protein compare
Atu0948 +0.6 2.4 hypothetical protein compare
Atu1654 +0.6 3.1 nitroreductase compare
Atu8177 +0.6 1.8 hypothetical protein compare
Atu1321 +0.6 2.6 hypothetical protein compare
Atu0107 +0.6 1.5 hypothetical protein compare
Atu5455 +0.6 2.4 hypothetical protein compare
Atu2659 +0.6 2.9 MFS permease compare
Atu3443 +0.6 1.6 hypothetical protein compare
Atu3216 +0.6 1.5 oligopeptide ABC transporter ATPase compare
Atu3511 +0.6 1.2 glutaredoxin compare
Atu6045 +0.6 1.3 replication protein C compare
Atu2773 +0.6 2.5 hypothetical protein compare
Atu1241 +0.6 1.0 hypothetical protein compare
Atu3481 +0.6 2.0 enoyl-CoA hydratase compare
Atu4035 +0.6 3.1 two component response regulator compare
Atu3833 +0.6 3.2 hypothetical protein compare
Atu1182 +0.6 0.9 hypothetical protein compare
Atu3387 +0.6 1.0 sigma factor compare
Atu1781 +0.6 2.8 hypothetical protein compare
Atu0457 +0.6 3.4 hypothetical protein compare
Atu3044 +0.6 2.2 asparaginase compare
Atu2428 +0.6 3.1 exopolysaccharide production protein PssB compare
Atu3892 +0.6 2.0 hypothetical protein compare
Atu3510 +0.6 1.5 amidohydrolase compare
Atu3124 +0.6 1.4 hypothetical protein compare
Atu4030 +0.6 3.6 sugar ABC transporter permease compare
Atu2146 +0.6 2.1 hypothetical protein compare
Atu0463 +0.5 2.1 hypothetical protein compare
Atu4392 +0.5 2.2 denitrification regulatory protein compare
Atu2677 +0.5 1.5 protein tyrosine phosphatase compare
Atu3699 +0.5 1.5 hypothetical protein compare
Atu3618 +0.5 1.6 hypothetical protein compare
Atu5430 +0.5 0.8 hypothetical protein compare
Atu4555 +0.5 1.4 hypothetical protein compare
Atu2481 +0.5 2.3 lipase esterase compare
Atu3721 +0.5 0.8 hypothetical protein compare
Atu0460 +0.5 2.1 hypothetical protein compare
Atu0532 +0.5 3.2 hypothetical protein compare
Atu8023 +0.5 1.2 hypothetical protein compare
Atu1836 +0.5 0.9 hypothetical protein compare
Atu5493 +0.5 1.3 hypothetical protein compare
Atu2729 +0.5 1.2 hypothetical protein compare
Atu1480 +0.5 1.1 hypothetical protein compare
Atu1731 +0.5 2.6 xanthine-guanine phosphoribosyltransferase compare
Atu2042 +0.5 1.7 short chain dehydrogenase compare
Atu1301 +0.5 1.2 hypothetical protein compare
Atu3413 +0.5 1.0 AsnC family transcriptional regulator compare
Atu0464 +0.5 3.1 hypothetical protein compare
Atu1531 +0.5 2.4 hypothetical protein compare
Atu0332 +0.5 2.7 RNA polymerase sigma-54 factor compare
Atu3411 +0.5 2.1 ABC transporter permease compare
Atu8143 +0.5 1.6 hypothetical protein compare
Atu0230 +0.5 1.0 hypothetical protein compare
Atu1435 +0.5 1.6 hypothetical protein compare
Atu8168 +0.5 0.9 hypothetical protein compare
Atu2484 +0.5 0.9 hypothetical protein compare
Atu1510 +0.5 1.2 hypothetical protein compare
Atu8060 +0.5 2.4 hypothetical protein compare
Atu5057 +0.5 1.3 hypothetical protein compare
Atu1577 +0.5 1.3 ABC transporter, substrate binding protein (amino acid) compare
Atu1660 +0.5 1.3 hypothetical protein compare
Atu2273 +0.5 1.3 hypothetical protein compare
Atu2374 +0.5 1.5 hypothetical protein compare
Atu2496 +0.5 2.1 nitroreducatase compare
Atu3345 +0.5 1.3 6-pyruvoyl tetrahydrobiopterin synthase compare
Atu8090 +0.5 2.5 hypothetical protein compare
Atu1226 +0.5 1.4 exoD protein compare
Atu4732 +0.5 1.8 fimbrial chaperone compare
Atu2450 +0.5 0.8 hypothetical protein compare
Atu3172 +0.5 2.0 sugar ABC transporter permease compare
Atu4803 +0.5 1.5 two component response regulator compare
Atu0436 +0.5 3.0 hypothetical protein compare
Atu4210 +0.5 2.2 sugars ABC transporter permease compare
Atu4798 +0.5 2.4 hypothetical protein compare
Atu3076 +0.5 1.8 uracil transport protein compare
Atu0932 +0.5 1.4 hypothetical protein compare
Atu4027 +0.5 1.3 cytochrome c2 compare
Atu1170 +0.5 1.8 RhtB family transporter compare
Atu3073 +0.5 1.6 aspartate racemase compare
Atu0782 +0.5 2.7 hypothetical protein compare
Atu0470 +0.5 1.0 hypothetical protein compare
Atu1482 +0.5 1.7 hypothetical protein compare
Atu4527 +0.5 0.7 hypothetical protein compare
Atu3451 +0.5 1.9 monooxygenase compare
Atu2055 +0.5 1.8 HlyD family secretion protein compare
Atu2472 +0.4 0.6 hypothetical protein compare
Atu4896 +0.4 0.9 acetyltransferase compare
Atu4519 +0.4 2.2 branched amino acid ABC transporter substrate-binding protein compare
Atu0580 +0.4 1.3 flagellar biosynthetic protein compare
Atu4321 +0.4 2.5 ribose ABC transporter ATPase compare
Atu1460 +0.4 1.3 hypothetical protein compare
Atu0552 +0.4 1.9 flagellar basal-body rod protein compare
Atu3182 +0.4 1.2 hypothetical protein compare
Atu1694 +0.4 0.5 hypothetical protein compare
Atu0369 +0.4 1.2 hypothetical protein compare
Atu0890 +0.4 1.8 hypothetical protein compare
Atu8194 +0.4 0.9 hypothetical protein compare
Atu1641 +0.4 1.8 hypothetical protein compare
Atu8040 +0.4 1.2 hypothetical protein compare
Atu3834 +0.4 2.3 hypothetical protein compare
Atu0492 +0.4 1.6 hypothetical protein compare
Atu0693 +0.4 2.1 PmbA/TldD related protein compare
Atu8094 +0.4 1.1 hypothetical protein compare
Atu3173 +0.4 1.7 sugar ABC transporter permease compare
Atu1910 +0.4 1.4 hypothetical protein compare
Atu2181 +0.4 2.1 hypothetical protein compare
Atu0382 +0.4 1.2 hypothetical protein compare
Atu4021 +0.4 1.9 LysR family transcriptional regulator compare
Atu0154 +0.4 2.6 hypothetical protein compare
Atu1846 +0.4 0.6 hypothetical protein compare
Atu2275 +0.4 1.1 hypothetical protein compare
Atu4493 +0.4 1.4 hypothetical protein compare
Atu1831 +0.4 1.4 hypothetical protein compare
Atu8092 +0.4 2.0 hypothetical protein compare
Atu1868 +0.4 1.4 tRNA/rRNA methyltransferase compare
Atu2665 +0.4 1.9 transcriptional regulator, MarR family compare
Atu3523 +0.4 1.6 polysaccharide biosynthesis-like protein compare
Atu1744 +0.4 1.2 nitroreductase family protein compare
Atu0785 +0.4 1.3 ribosomal-protein (S5)-alanine N-acetyltransferase compare
Atu8165 +0.4 1.0 hypothetical protein compare
Atu0168 +0.4 1.6 guanylate kinase compare
Atu8169 +0.4 1.3 hypothetical protein compare
Atu2433 +0.4 0.5 hypothetical protein compare
Atu4292 +0.4 2.3 chloramphenicol resistance protein compare
Atu3875 +0.4 1.8 aldolase compare
Atu2752 +0.4 2.0 hypothetical protein compare
Atu8024 +0.4 1.0 hypothetical protein compare
Atu2737 +0.4 1.7 oxidoredutase compare
Atu4299 +0.4 0.8 hypothetical protein compare
Atu3214 +0.4 2.0 oligopeptide ABC transporter permease compare
Atu0553 +0.4 1.8 flagellar hook-basal body complex protein compare
Atu2712 +0.4 0.9 ABC transporter, nucleotide binding/ATPase protein (thiamine) compare
Atu1308 +0.4 2.1 aspartate carbamoyl transferase catalytic subunit compare
Atu2350 +0.4 2.3 transcriptional regulator, LysR family compare


Specific Phenotypes

For 3 genes in this experiment

For in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days in Agrobacterium fabrum C58

For in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days across organisms