Experiment set15IT013 for Agrobacterium fabrum C58

Compare to:

LB_Maize

200 most important genes:

  gene name fitness t score description  
Atu0602 -5.6 -8.5 glutamine synthetase compare
Atu2125 -5.4 -3.6 ABC transporter, nucleotide binding/ATPase protein compare
Atu0659 -4.9 -5.8 NTP pyrophosphohydrolase, MutT family compare
Atu0421 -4.8 -2.0 ABC transporter, membrane spanning protein compare
Atu2684 -4.8 -3.2 hypothetical protein compare
Atu0422 -4.2 -2.7 ABC transporter, membrane spanning protein compare
Atu0601 -3.8 -11.7 oxidoreductase compare
Atu1021 -3.7 -3.6 outer membrane protein compare
Atu0188 -3.3 -3.9 ABC transporter, membrane spanning protein (peptide) compare
Atu0999 -3.3 -4.5 magnesium transport protein compare
Atu2439 -3.2 -1.6 hypothetical protein compare
Atu0030 -2.7 -2.4 phosphocarrier protein HPr compare
Atu0190 -2.5 -7.7 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu0912 -2.3 -1.2 Na+/H+ antiporter compare
Atu1359 -2.3 -1.5 dnaK deletion suppressor protein compare
Atu3727 -2.2 -5.1 hypothetical protein compare
Atu0368 -2.2 -6.3 tRNA pseudouridine synthase I compare
Atu1774 -2.0 -5.2 ABC transporter, substrate binding protein (peptide) compare
Atu8095 -2.0 -11.7 hypothetical protein compare
Atu0784 -1.8 -3.8 hypothetical protein compare
Atu1810 -1.7 -1.6 hypothetical protein compare
Atu3730 -1.7 -2.7 hypothetical protein compare
Atu0141 -1.7 -2.2 cytochrome O ubiquinol oxidase subunit I compare
Atu4890 -1.6 -3.6 IS426 transposase compare
Atu1030 -1.5 -2.0 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu1803 -1.5 -8.4 cold shock protein compare
Atu4317 -1.5 -2.9 TetR family transcriptional regulator compare
Atu3910 -1.5 -3.9 LamB/YcsF family protein compare
Atu3763 -1.4 -1.2 hypothetical protein compare
Atu0331 -1.4 -3.6 sigma-54 modulation protein compare
Atu1099 -1.4 -6.2 hypothetical protein compare
Atu0050 -1.4 -4.4 two component response regulator compare
Atu4892 -1.4 -9.6 hypothetical protein compare
Atu0978 -1.3 -5.6 two component response regulator compare
Atu3013 -1.3 -3.9 hypothetical protein compare
Atu2555 -1.3 -3.0 L-lysine 2,3-aminomutase compare
Atu2832 -1.3 -4.0 tRNA modification GTPase compare
Atu2831 -1.3 -4.2 glucose inhibited division protein A compare
Atu0189 -1.3 -2.5 ABC transporter, membrane spanning protein (peptide) compare
Atu0163 -1.3 -6.1 tonB protein compare
Atu8138 -1.2 -1.9 hypothetical protein compare
Atu0499 -1.2 -5.9 hypothetical protein compare
Atu3018 -1.2 -5.1 hypothetical protein compare
Atu3613 -1.2 -5.2 hypothetical protein compare
Atu3006 -1.2 -4.3 hypothetical protein compare
Atu3009 -1.2 -1.6 exopolysaccharide production protein compare
Atu1300 -1.2 -7.1 MFS permease compare
Atu3011 -1.2 -2.7 ArsR family transcriptional regulator compare
Atu4773 -1.2 -2.3 two component response regulator compare
Atu3598 -1.2 -1.3 thiol:disulfide interchange protein compare
Atu3010 -1.2 -7.0 hypothetical protein compare
Atu3017 -1.2 -1.7 phosphoglyceromutase compare
Atu3517 -1.2 -4.1 acetyltransferase compare
Atu3016 -1.1 -5.3 phosphoglyceromutase compare
Atu1677 -1.1 -3.3 queuine tRNA-ribosyltransferase compare
Atu4889 -1.1 -6.6 hypothetical protein compare
Atu3698 -1.1 -2.8 thioredoxin compare
Atu0923 -1.1 -5.8 hypothetical protein compare
Atu2245 -1.1 -7.3 Na+/Pi-cotransporter compare
Atu4893 -1.1 -5.4 hypothetical protein compare
Atu4888 -1.1 -3.6 hypothetical protein compare
Atu0162 -1.1 -5.2 biopolymer transport protein compare
Atu0434 -1.1 -2.3 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu3015 -1.1 -4.6 hypothetical protein compare
Atu1285 -1.1 -6.3 metal dependent hydrolase compare
Atu0161 -1.1 -6.6 biopolymer transport protein compare
Atu4635 -1.0 -3.5 hypothetical protein compare
Atu0142 -1.0 -1.6 cytochrome o ubiquinol oxidase subunit II compare
Atu0051 -1.0 -4.1 two component sensor kinase compare
Atu4514 -1.0 -5.5 RpiR family transcriptional regulator compare
Atu0388 -1.0 -6.5 two component sensor kinase compare
Atu2746 -1.0 -2.3 hypothetical protein compare
Atu3469 -1.0 -3.2 phosphoglyceromutase compare
Atu5125 -1.0 -4.7 GntR family transcriptional regulator compare
Atu3014 -1.0 -2.9 hypothetical protein compare
Atu3019 -1.0 -5.7 hypothetical protein compare
Atu1793 -0.9 -6.0 phosphatidylcholine synthase compare
Atu8191 -0.9 -1.9 hypothetical protein compare
Atu5045 -0.9 -1.3 hypothetical protein compare
Atu3012 -0.9 -2.2 hypothetical protein compare
Atu0025 -0.9 -1.3 hypothetical protein compare
Atu8029 -0.9 -1.8 hypothetical protein compare
Atu4173 -0.9 -1.9 phosphoenolpyruvate-protein phosphotransferase compare
Atu5107 -0.9 -3.9 hypothetical protein compare
Atu8054 -0.9 -1.0 hypothetical protein compare
Atu4887 -0.9 -4.2 hypothetical protein compare
Atu2217 -0.9 -3.2 hypothetical protein compare
Atu1076 -0.9 -2.2 colicin V production protein compare
Atu1031 -0.9 -1.5 hypothetical protein compare
Atu1967 -0.9 -2.6 hypothetical protein compare
Atu4873 -0.9 -4.8 TetR family transcriptional regulator compare
Atu3121 -0.9 -0.9 cold shock protein compare
Atu2824 -0.8 -3.6 hypothetical protein compare
Atu4894 -0.8 -4.7 transposase compare
Atu3754 -0.8 -2.2 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu0769 -0.8 -1.0 protoheme IX farnesyltransferase compare
Atu0658 -0.8 -4.3 phosphate permease compare
Atu1163 -0.8 -1.5 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu8202 -0.8 -3.6 hypothetical protein compare
Atu3020 -0.8 -4.4 GntR family transcriptional regulator compare
Atu3008 -0.8 -1.0 hypothetical protein compare
Atu4884 -0.8 -3.1 hypothetical protein compare
Atu2207 -0.8 -2.2 two component sensor kinase compare
Atu1559 -0.8 -1.8 hypothetical protein compare
Atu8130 -0.8 -5.0 hypothetical protein compare
Atu6098 -0.8 -0.8 transcriptional regulator, HTH family compare
Atu0251 -0.8 -6.0 hypothetical protein compare
Atu0498 -0.8 -4.7 hypothetical protein compare
Atu0486 -0.7 -3.2 dihydroorotate dehydrogenase compare
Atu1619 -0.7 -2.6 protein-export membrane protein SECG compare
Atu4881 -0.7 -4.3 hypothetical protein compare
Atu1238 -0.7 -3.1 polysaccharide export protein compare
Atu0399 -0.7 -2.5 dihydroorotase compare
Atu3697 -0.7 -1.9 ATP-dependent protease LA 2 compare
Atu3603 -0.7 -2.0 two component response regulator compare
Atu6114 -0.7 -2.7 hypothetical protein compare
Atu2484 -0.7 -1.4 hypothetical protein compare
Atu4677 -0.7 -1.1 hypothetical protein compare
Atu4877 -0.7 -4.6 short-chain dehydrogenase compare
Atu1232 -0.7 -1.3 hypothetical protein compare
Atu1874 -0.7 -1.6 RecA protein compare
Atu8096 -0.7 -1.5 hypothetical protein compare
Atu1513 -0.7 -3.3 ABC excinuclease subunit A compare
Atu2432 -0.7 -1.1 hypothetical protein compare
Atu4880 -0.7 -4.3 AraC family transcriptional regulator compare
Atu2662 -0.7 -1.0 acetyltransferase compare
Atu3022 -0.7 -4.1 sugar ABC transporter permease compare
Atu4711 -0.7 -2.9 two component sensor kinase compare
Atu4099 -0.7 -2.8 hypothetical protein compare
Atu2692 -0.7 -1.9 intracellular septation protein compare
Atu4896 -0.7 -1.6 acetyltransferase compare
Atu1844 -0.6 -2.3 Phosphoribosylformylglycinamidine synthetase compare
Atu1103 -0.6 -2.2 rRNA-adenine N6,N6-dimethyltransferase compare
Atu4879 -0.6 -3.5 hypothetical protein compare
Atu0692 -0.6 -3.9 glutathione-regulated potassium-efflux system protein compare
Atu2113 -0.6 -2.3 N-acetylmuramoyl-L-alanine amidase compare
Atu3689 -0.6 -4.6 iron(III ABC transporter permease dicitrate ABC transporter permease compare
Atu3963 -0.6 -2.4 GntR family transcriptional regulator compare
Atu4876 -0.6 -4.5 oxidoreductase compare
Atu3289 -0.6 -2.2 thiamine-phosphate pyrophosphorylase compare
Atu1546 -0.6 -2.2 transcriptional regulator, MerR family compare
Atu0297 -0.6 -2.3 hypothetical protein compare
Atu3691 -0.6 -4.1 iron (III) dicitrate ABC transporter ATPase compare
Atu0604 -0.6 -1.7 hypothetical protein compare
Atu0876 -0.6 -1.1 superoxide dismutase compare
Atu3021 -0.6 -4.2 sugar ABC transporter ATPase compare
Atu4872 -0.6 -3.5 LysR family transcriptional regulator compare
Atu0780 -0.6 -4.2 hypothetical protein compare
Atu3144 -0.6 -3.0 GntR family transcriptional regulator compare
Atu3249 -0.6 -3.4 septum formation inhibitor compare
Atu3023 -0.6 -4.1 sugar ABC transporter permease compare
Atu3248 -0.6 -3.9 cell division inhibitor compare
Atu0638 -0.6 -1.6 hypothetical protein compare
Atu0070 -0.6 -3.6 ribonucleoside-diphosphate reductase 2 alpha chain compare
Atu0977 -0.6 -2.5 serine protease DO-like protease compare
Atu5114 -0.6 -1.5 hypothetical protein compare
Atu5075 -0.6 -4.3 GntR family transcriptional regulator compare
Atu1851 -0.6 -1.5 BolA/YrbA family protein compare
Atu1678 -0.6 -2.4 S-adenosylmethionine tRNA ribosyltransferase-isomerase compare
Atu0971 -0.6 -1.9 two component sensor kinase compare
Atu2776 -0.6 -3.5 hypothetical protein compare
Atu1629 -0.6 -0.8 transcriptional regulator, ArsR family compare
Atu1503 -0.6 -0.9 hypothetical protein compare
Atu2532 -0.6 -1.8 transcriptional regulator, MarR family compare
Atu1141 -0.6 -2.5 Phosphoribosylglycinamide synthetase compare
Atu0979 -0.6 -3.0 two component sensor kinase compare
Atu0085 -0.6 -2.0 tRNA pseudouridine 55 synthase compare
Atu4346 -0.6 -2.6 hypothetical protein compare
Atu4159 -0.6 -2.1 AsnC family transcriptional regulator compare
Atu1466 -0.6 -1.3 hypothetical protein compare
Atu0361 -0.6 -1.5 transcriptional regulator compare
Atu8041 -0.6 -1.9 hypothetical protein compare
Atu4214 -0.6 -2.8 cold shock protein compare
Atu1588 -0.5 -3.2 homoserine dehydrogenase compare
Atu1759 -0.5 -3.4 L-serine dehydratase compare
Atu2140 -0.5 -1.5 hypothetical protein compare
Atu3776 -0.5 -2.7 hypothetical protein compare
Atu0636 -0.5 -3.4 hypothetical protein compare
Atu5097 -0.5 -2.6 ATP-dependent DNA ligase compare
Atu2464 -0.5 -1.6 formyltetrahydrofolate deformylase compare
Atu1592 -0.5 -2.5 hypothetical protein compare
Atu1518 -0.5 -1.6 transcriptional regulator, Fur family compare
Atu5105 -0.5 -2.3 hypothetical protein compare
Atu2808 -0.5 -2.8 cobyric acid synthase compare
Atu2809 -0.5 -3.4 cobalamin biosynthesis protein compare
Atu3999 -0.5 -1.3 dithiobiotin synthetase compare
Atu1515 -0.5 -2.3 hypothetical protein compare
Atu0995 -0.5 -3.0 hypothetical protein compare
Atu1606 -0.5 -2.0 methionine aminopeptidase compare
Atu4869 -0.5 -1.6 hypothetical protein compare
Atu3519 -0.5 -2.7 peptidyl-prolyl cis-trans isomerase compare
Atu1701 -0.5 -1.1 protein-L-isoaspartate O-methyltransferase compare
Atu0062 -0.5 -2.8 transcriptional regulator, ROK family compare
Atu1725 -0.5 -1.6 hypothetical protein compare
Atu4061 -0.5 -1.9 exopolysaccharide production repressor protein compare
Atu1580 -0.5 -3.2 ABC transporter, nucleotide binding/ATPase protein (amino acid) compare
Atu2608 -0.5 -3.2 N-acetylglucosamine-6-phosphate deacetylase compare
Atu0565 -0.5 -2.3 hypothetical protein compare
Atu2045 -0.5 -2.0 HFLK protein compare
Atu4540 -0.5 -1.6 protocatechuate 3,4-dioxygenase subunit beta compare


Specific Phenotypes

For 1 genes in this experiment

For lb_maize Maize in Agrobacterium fabrum C58

For lb_maize Maize across organisms